TCONS_00010585-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00010585-protein
Unique NameTCONS_00010585-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length858

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00010585-protein ID=TCONS_00010585-protein|Name=TCONS_00010585-protein|organism=Clytia hemisphaerica|type=polypeptide|length=858bp
LSLIKKCNNMEEEERENSQRVEDEKPSTNHKELVDKLNQNWTKIEEILSL
KEGDFKQIATDLSNIVHETVDILLELSNDKDYELVSCEFCQRNHLFNKIY
NWTGQHRECLRVMAKQQLGIYDKVIQKSSIALLSCKEVLYPLLLLLMSLK
PTDKRKVPPDIEQLYVTILYHISQRITALDFLDLLAQDLFTQEGFKIPKF
TFFELLTLYTHHGGENGNLARKAILDSIRTSASHELFQKYITGESAVSVI
IAGGLSARYSSLPTTLDIHTEEWHYITEEDLVEMKEVQSFLQALDFCCQV
TEASNPQVRSHLGKLIYDGFLMSVLAPALNQSQYDSQIAVMAYLDLFLRC
ISSPKVMEVFLKVLMTDAYDNKALITLLIYHINSESVQLSMVAIHLFKTL
LELNCEDIIFHLVFRYLLPCDHILPNQKRTIKSVDYYCKSATMFLYLTPS
CCIETNKSNRNNEKDESLDQLPDSHANTASTNASPRSIRSIGESPRVARK
ASVNSITSRVSNLSIVPDLRPQETVDFLEYLAEARSAITYCKRSCVCWSA
VYDGMDVVTDFPRNGRLSSSTNRTRTSDGTPIAFQRNYSTSSDNAFDDSS
KSKVDPIYTTEILGPFLNAIFDKLEVMFESNIYVNLLLTSLVSRLACYPQ
PLLRSFLLNANLVIRPGVRSLAQVLKRVSDGADLFVGRMDDYQVLITKAR
ENLLNRKEKDHTTGGKIKEENETQLIISLDTTTGSTKFQRKELDKPVSAD
ELVSLSPSTIPRSASVSVNTSLASNENSELKRTATISNPGSIGRLHPALP
KIGLKSPSKRSKNFPSKSEISELRKKNPRVIKNAVYCVVVLEEFMKELAA
ISIEQTMQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005923XLOC_005923Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00010585TCONS_00010585Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019384RetinoicA-induced_16-like
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 4..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 802..822
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 462..495
IPR019384Retinoic acid induced 16-like proteinPFAMPF10257RAI16-likecoord: 88..417
e-value: 7.8E-48
score: 163.1

Blast
BLAST of TCONS_00010585-protein vs. Swiss-Prot (Human)
Match: F16A1 (Protein FAM160A1 OS=Homo sapiens GN=FAM160A1 PE=2 SV=2)

HSP 1 Score: 233.802 bits (595), Expect = 2.707e-64
Identity = 163/527 (30.93%), Postives = 261/527 (49.53%), Query Frame = 0
Query:   40 NWTKIEEIL----SLK--EGDFKQIATDLSNIVHETVDILLEL---SNDKDYELVSC-EFCQRNHLFNKIYNWTGQHRECLRVMAKQQLGIYDKVIQKSSIALLSCKEVLYPLLLLLMSLKPTDKRKVPPDIEQLYVTILYHISQRITALD--FLDLLAQDLFTQEGFKIPKFTFFELLTLYTHHGGENGNLARKAILDSIRTSASHELFQKYITGESAVSVIIAGGLSARYSSLPTTLDIHTEEWHYITEEDLVEMKEVQSFLQALDFCCQVTEASNPQVRSHLGKLIYDGFLMSVLAPALNQSQYDSQIAVMAYLDLFLRCISSPKVMEVFLKVLMTDAYDNKALITLLIYHINSESVQLSMVAIHLFKTLLELNCEDIIFHLVFRYLLPCDHILPNQKRTIKSVDYYCKSATMFLYLTPSCCIETNKSNRNNEKDESLDQLPDSHANTASTNASPRSIRSIGESPRVARKASVNSITSRVSNLSIVPDLRPQETVDFLEYLAEARSAITYCKRSCVCWSAVYDG 554
            +W ++ +IL     LK  +  +  I  D ++ V   V+ +L L      KD  +    EF    ++  K++ W+ + RE       +QL +Y+ ++ +S   LL  K +L PL++LL S   T      P +E+  V +L  +   I A D   L+L      T E      F  F LL  + H  G  G  AR A+L  +  SA + +   +I   +    ++A GLS  YSSLPT L+   EEWH + ++D + +  +  F+ +L+FC  V + ++P +R+ L   IY+GFL+ VLAPAL++   +  +   AYLDLFLR IS P ++E+FL+ ++   ++N  ++  L   IN+   +L +V++ LF+TL+ L+CED++  LV RYL+PC+H++ +Q+  +K  D Y  SA   L LTP CC         N++ + +      H  +              E P     +    I      L I           +L+YL EA + I  C R C  WSA+YDG
Sbjct:   32 HWAQVVKILEKHDPLKNTQAKYGSIPPDEASAVQNYVEHMLFLLIEEQAKDAAMGPILEFVVSENIMEKLFLWSLR-REFTDETKIEQLKMYEMLVTQSHQPLLHHKPILKPLMMLLSSCSGTTT----PTVEEKLVVLLNQLCS-ILAKDPSILELF---FHTSEDQGAANFLIFSLLIPFIHREGSVGQQARDALLFIMSLSAENTMVAHHIVENTYFCPVLATGLSGLYSSLPTKLEEKGEEWHCLLKDDWLLLPSLVQFMNSLEFCNAVIQVAHPLIRNQLVNYIYNGFLVPVLAPALHKVTVEEVMTTTAYLDLFLRSISEPALLEIFLRFILLHQHENVHILDTLTSRINT-PFRLCVVSLALFRTLIGLHCEDVMLQLVLRYLIPCNHMMLSQRWAVKERDCYSVSAAKLLALTPVCCSSGITLTLGNQERDYILWSKCMHDTSGPV-----------ERPFPEAFSESACIVEYGKALDI----------SYLQYLWEAHTNILRCMRDCRVWSALYDG 527          

HSP 2 Score: 98.2117 bits (243), Expect = 8.517e-21
Identity = 55/143 (38.46%), Postives = 85/143 (59.44%), Query Frame = 0
Query:  597 DDSSKSKVDPIYT--TEILGPFLNAIFDKLEVMFESNIYVNLLLTSLVSRLACYPQPLLRSFLLNANLVIRPGVRSLAQVLKRVSDGADLFVGRMDDYQVLITKARENLLNRKEKDHTTGGKIKEENETQLIISLDTTTGSTK 737
            D+++ +   P+ T  T   GPF++ +  KLE M E++++VNLLL  ++++LA YPQPLLRSFLLN N+V +P VRSL QVL  V +  + F     D+  L+ +A++ LL R +    T   + ++      I   + TGS K
Sbjct:  832 DEAAFASRHPVRTQSTPFTGPFISVVLSKLENMLENSLHVNLLLIGIITQLASYPQPLLRSFLLNTNMVFQPSVRSLYQVLASVKNKIEQFASVERDFPGLLIQAQQYLLFRVDMSDMTPAALTKDP-----IQEASRTGSGK 969          
The following BLAST results are available for this feature:
BLAST of TCONS_00010585-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
F16A12.707e-6430.93Protein FAM160A1 OS=Homo sapiens GN=FAM160A1 PE=2 ... [more]
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