TCONS_00010731-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00010731-protein
Unique Name	TCONS_00010731-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	580

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00010731-protein ID=TCONS_00010731-protein|Name=TCONS_00010731-protein|organism=Clytia hemisphaerica|type=polypeptide|length=580bp
MANNNKLENQNEAQNQNKAQNQDESQNQNETKNQNEAQNQNEAQNQIEDQ
NQIEAQNQIDQTKKEVIALDMEEILERIGPYGRMQKTFVFIFCMLAIPST
YQTMVMIFIGNSPDWKCVSNNTECNMTAIFPKTDKQRCDMDRKSWEYTKH
KSFSIVTEWDLICSDDYISFLVNSAMFIGWAFGAIILGWISDKYGRKITL
YPSFTVCILCSFLMSFANSIWWVFVLRVFMGFAQGGIGLTLFVMASELVG
PKYRSFAGTTVWVAFTLALCLMALQTYFVQEWRSLLQITSIPYIVLLPTY
FLVPESVRWLRLNGRIEEAEQILRKVAHRNKQPWPNAKLSTPATTAEVVS
AKYLFVPTKMCISTLIQVFAWFSVSLVYYGISLASDNLGGSMYRDFVLTS
VVEIPANILAMFTLNIFGRRPTTCGNWVISGVSCMGVAFIPTHGVYNWIR
VAFGMLGKLCVTLAFSALFVWSVELYPTVIRSQGMGLMNVVSRIGGASAP
WVAQYLGNFNKYLPFLVMGSLSLISAALCYKLNETTGMALAETLEDFNQS
DSKESKTMTTIIENDFTKEDEKEQKENTSV

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_006013	XLOC_006013	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00010731	TCONS_00010731	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005828	MFS_sugar_transport-like
IPR005829	Sugar_transporter_CS
IPR020846	MFS_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0022857	transmembrane transporter activity
GO:0005215	transporter activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0022857	transmembrane transporter activity
molecular_function	GO:0005215	transporter activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 3..53
None	No IPR available	GENE3D	1.20.1250.20		coord: 349..560 e-value: 4.7E-21 score: 74.5
None	No IPR available	GENE3D	1.20.1250.20		coord: 85..320 e-value: 6.4E-30 score: 103.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 555..580
IPR005828	Major facilitator, sugar transporter-like	PFAM	PF00083	Sugar_tr	coord: 169..543 e-value: 6.7E-30 score: 104.2
IPR005829	Sugar transporter, conserved site	PROSITE	PS00216	SUGAR_TRANSPORT_1	coord: 187..203
IPR020846	Major facilitator superfamily domain	PROSITE	PS50850	MFS	coord: 88..537 score: 22.713
IPR020846	Major facilitator superfamily domain	CDD	cd06174	MFS	coord: 171..532 e-value: 2.55037E-36 score: 137.06
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 170..538

Blast

[Close]

BLAST of TCONS_00010731-protein vs. Swiss-Prot (Human)
Match: S22A4 (Solute carrier family 22 member 4 OS=Homo sapiens GN=SLC22A4 PE=1 SV=3)

HSP 1 Score: 233.417 bits (594), Expect = 2.880e-69
Identity = 163/557 (29.26%), Postives = 268/557 (48.11%), Query Frame = 0

Query:   70 DMEEILERIGPYGRMQKTFVFIFCMLAIPSTYQTMVMIFIGNSPDWKCV-----------SNN----------------------TECNMTAIF--PKTDKQRCDMDRKS----WEYTKHKSFS-IVTEWDLICSDDYISFLVNSAMFIGWAFGAIILGWISDKYGRKITLYPSFTVCILCSFLMSFANSIWWVF-VLRVFMGFAQGGIGLTLFVMASELVGPKYR-SFAGTTVWVAFTLALCLMALQTYFVQEWRSLLQITSIPYIVLLPTYFLVPESVRWLRLNGRIEEAEQILRKVAHRNKQPWPNAKLSTPATTAEVVSAKY----LFVPTKMCISTLIQVFAWFSVSLVYYGISLASDNLGGSMYRDFVLTSVVEIPANILAMFTLNIFGRRPTTCGNWVISGVSCMGVAFIPTHGVYNWIRVAFGMLGKLCVTLAFSALFVWSVELYPTVIRSQGMGLMNVVSRIGGASAPWVAQYLGNFNKYLPFLVMGSLSLISAALCYKLNETTGMALAETLEDFNQSDSKESKTMTTIIENDFTKEDEKEQKENTSV 580
            D +E++  +G +G  Q+   F+     IP+ +  M ++F+  +P+ +C             NN                      T  N +A+   P  D     ++++S    WE+++    S +VTEW+L+C D++   L  S  F+G   G+ + G +SD++GRK  L+ +  V    SFL  F+ S W +F VL V +G  Q    +  F++ +E++G   R  F+   V   F +   L+ L  YF+++WR LL   ++P ++ +P ++ +PES RWL    R  EAE I++K A  N    P     +      +   K     LF    + I T++ +  W   S+ Y+ +SL + NL G  Y +  L++++EIPA I A   L    RR          G   + +  +P    Y ++ +   MLGK  +T AFS L+V++ ELYPT++R+  +G+ +  SR+G   AP+   YLG +N+ LP++VMGSL+++   L     E+ GM L ETLE   +     S   T          D  E +EN  V
Sbjct:    3 DYDEVIAFLGEWGPFQRLIFFLLSASIIPNGFNGMSVVFLAGTPEHRCRVPDAANLSSAWRNNSVPLRLRDGREVPHSCSRYRLATIANFSALGLEPGRDVDLGQLEQESCLDGWEFSQDVYLSTVVTEWNLVCEDNWKVPLTTSLFFVGVLLGSFVSGQLSDRFGRKNVLFATMAVQTGFSFLQIFSIS-WEMFTVLFVIVGMGQISNYVVAFILGTEILGKSVRIIFSTLGVCTFFAVGYMLLPLFAYFIRDWRMLLLALTVPGVLCVPLWWFIPESPRWLISQRRFREAEDIIQKAAKMNNIAVPAVIFDSVEELNPLKQQKAFILDLFRTRNIAIMTIMSLLLWMLTSVGYFALSLDAPNLHGDAYLNCFLSALIEIPAYITAWLLLRTLPRRYIIAAVLFWGGGVLLFIQLVPVD--YYFLSIGLVMLGKFGITSAFSMLYVFTAELYPTLVRNMAVGVTSTASRVGSIIAPYFV-YLGAYNRMLPYIVMGSLTVLIGILTLFFPESLGMTLPETLEQMQKVKWFRSGKKT---------RDSMETEENPKV 546

The following BLAST results are available for this feature:

BLAST of TCONS_00010731-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00010731-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
S22A4	2.880e-69	29.26	Solute carrier family 22 member 4 OS=Homo sapiens ...	[more]

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TCONS_00010731-protein (polypeptide) - C. hemisphaerica