TCONS_00010786-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00010786-protein
Unique NameTCONS_00010786-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length602

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00010786-protein ID=TCONS_00010786-protein|Name=TCONS_00010786-protein|organism=Clytia hemisphaerica|type=polypeptide|length=602bp
VMATQLAADEMFYRVCYFTNWSQYRPGNAKYTAKNIDPGLCTHIVYSFAK
INKETVSMEFTEWNDESTIKEVMALKKANPNLKILLGVGGWNHEKKDSPF
SAISADQTTRMIFALNAISLLRKHKFDGLDLDWEYPAIRGGSPPEDKKRF
TELCRALRDNFDMNAEVSSNPRLILSSAVGASDRIVDKAYEVSEIAKYLD
FVNLISYDFYGAWNNFTYHPTPMNGSELTVPKAVQLWLDRGMPAEKIVFG
VSTFGHSWTLEDKSQTGFYSPAILKEGGGQPGPFTGAKGILAYYEICNTK
WDKVVDTNIALAPYAYKGDQWVAYDDQASIQLKVKDVIIKKNLKGFMVWT
LDFDDFSGHFCGRGRYPIINAVKTALMIEELRRKFTITTTTTTQKTTSTT
PKTTATKTTTTTTTTTTTSPTKTTQKTITTTPSTTTTVPTTTTTIPTTTT
PTTTKTTPSTPSTVPTATTTTTSPDTTKHVVKEKTTTPKTTTTLEKTKTT
SKKTTTPSKKTTTPSEKTTTTSEKTTTTSEIKTTIAEKTTTATERTTTTT
TQTEKSTVETRQNRPTTPLKNPGTNGETSDAMTRTINIAMLLFSMILVIV
SM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006059XLOC_006059Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00010786TCONS_00010786Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011583Chitinase_II
IPR001223Glyco_hydro18_cat
IPR001579Glyco_hydro_18_chit_AS
IPR029070Chitinase_insertion
IPR017853Glycoside_hydrolase_SF
Vocabulary: Molecular Function
TermDefinition
GO:0008061chitin binding
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
molecular_function GO:0008061 chitin binding
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011583Chitinase IISMARTSM006362g34coord: 12..354
e-value: 6.3E-115
score: 397.8
NoneNo IPR availableGENE3D3.20.20.80coord: 3..390
e-value: 1.5E-95
score: 320.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 392..580
NoneNo IPR availableCDDcd02872GH18_chitolectin_chitotriosidasecoord: 14..376
e-value: 3.71058E-170
score: 490.533
IPR001223Glycoside hydrolase family 18, catalytic domainPFAMPF00704Glyco_hydro_18coord: 15..354
e-value: 1.0E-84
score: 284.8
IPR001579Glycoside hydrolase, chitinase active sitePROSITEPS01095CHITINASE_18coord: 126..134
IPR029070Chitinase insertion domainSUPERFAMILY54556Chitinase insertion domaincoord: 254..324
IPR017853Glycoside hydrolase superfamilySUPERFAMILY51445(Trans)glycosidasescoord: 329..376
coord: 15..258

Blast
[Close]
BLAST of TCONS_00010786-protein vs. Swiss-Prot (Human)
Match: CHIT1 (Chitotriosidase-1 OS=Homo sapiens GN=CHIT1 PE=1 SV=1)

HSP 1 Score: 336.65 bits (862), Expect = 1.712e-109
Identity = 171/378 (45.24%), Postives = 231/378 (61.11%), Query Frame = 0 
Query:   15 VCYFTNWSQYRPGNAKYTAKNIDPGLCTHIVYSFAKINKETVSMEFTEWNDESTIKEVMALKKANPNLKILLGVGGWNHEKKDSPFSAISADQTTRMIFALNAISLLRKHKFDGLDLDWEYPAIRGGSPPEDKKRFTELCRALRDNFDMNAEVSSNPRLILSSAVGASDRIVDKAYEVSEIAKYLDFVNLISYDFYGAWNNFTYHPTPM--------NGSELTVPKAVQLWLDRGMPAEKIVFGVSTFGHSWTLEDKSQTGFYSPAILKEGGGQPGPFTGAKGILAYYEICNTKW---DKVVDTNIALAPYAYKGDQWVAYDDQASIQLKVKDVIIKKNLKGFMVWTLDFDDFSGHFCGRGRYPIINAVKTALMIEEL 381
            VCYFTNW+QYR G A++  K++DP LCTH++Y+FA +    +S   TEWNDE+  +E   LKK NP LK LL +GGWN   +   F+ + A    R  F  +AI  LRK+ FDGLDLDWEYP  +G SP  DK+RFT L + L + F   A+ S   RL+LS+AV A    VD  YEV +IA+ LDFVNL++YDF+G+W   T H +P+          + L V  AVQ WL +G PA K++ G+ T+G S+TL   S T   +PA    G G PGPFT   G+LAYYE+C+ K     ++ D  +   PY ++ +QWV +DD  S + KV   + +K L G MVW LD DDF+G  C +GRYP+I  ++  L +  L
Sbjct:   25 VCYFTNWAQYRQGEARFLPKDLDPSLCTHLIYAFAGMTNHQLST--TEWNDETLYQEFNGLKKMNPKLKTLLAIGGWNFGTQK--FTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEYPGSQG-SPAVDKERFTTLVQDLANAFQQEAQTSGKERLLLSAAVPAGQTYVDAGYEVDKIAQNLDFVNLMAYDFHGSWEKVTGHNSPLYKRQEESGAAASLNVDAAVQQWLQKGTPASKLILGMPTYGRSFTLASSSDTRVGAPAT---GSGTPGPFTKEGGMLAYYEVCSWKGATKQRIQDQKV---PYIFRDNQWVGFDDVESFKTKVS-YLKQKGLGGAMVWALDLDDFAGFSCNQGRYPLIQTLRQELSLPYL 390
The following BLAST results are available for this feature:
BLAST of TCONS_00010786-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CHIT11.712e-10945.24Chitotriosidase-1 OS=Homo sapiens GN=CHIT1 PE=1 SV... [more]
back to top