TCONS_00010823-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00010823-protein
Unique NameTCONS_00010823-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length319

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00010823-protein ID=TCONS_00010823-protein|Name=TCONS_00010823-protein|organism=Clytia hemisphaerica|type=polypeptide|length=319bp
MADFQGAPGEVFAAEKILKKRYKKGRAEYLVKWQGYSSKFNTWEPVENIL
DERLLESYKALHPPGNRGKKKRRGGNVKSITPKKPKLEQVYVKEEATEHE
EEEDEGDTTVEEPPPPPPMVMGEVEGSVIEDIEHGTEDEDVDILNDSQDE
DRNTEPTLDRLNSSNNEAPLSLRIKIEEQPSSSKILTNRKNGSKSCPVSP
SPRLVSAETKKSTKAKTIPADVAIPKPKDVPNKLENIEVPESKTTILTTK
STADNAESEMKSTTEATLLPKTDITKIKCDCLKQRPLIDQITLTDITKGG
VTVTIKECFTDKGFFLATS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006071XLOC_006071Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00010823TCONS_00010823Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017984Chromo_dom_subgr
IPR000953Chromo/chromo_shadow_dom
IPR023780Chromo_domain
IPR033773CBX7_C
IPR023779Chromodomain_CS
IPR016197Chromodomain-like
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017984Chromo domain subgroupPRINTSPR00504CHROMODOMAINcoord: 37..49
score: 47.18
coord: 22..36
score: 45.11
coord: 9..17
score: 41.11
IPR000953Chromo/chromo shadow domainSMARTSM00298chromo_7coord: 11..63
e-value: 5.2E-17
score: 72.5
IPR000953Chromo/chromo shadow domainPROSITEPS50013CHROMO_2coord: 12..58
score: 17.101
IPR023780Chromo domainPFAMPF00385Chromocoord: 13..59
e-value: 1.9E-14
score: 53.2
IPR033773CBX family C-terminal motifPFAMPF17218CBX7_Ccoord: 286..311
e-value: 1.9E-7
score: 30.6
NoneNo IPR availableGENE3D2.40.50.40coord: 5..73
e-value: 3.8E-18
score: 64.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..213
NoneNo IPR availableCDDcd00024CHROMOcoord: 10..60
e-value: 1.9019E-13
score: 63.0519
IPR023779Chromo domain, conserved sitePROSITEPS00598CHROMO_1coord: 29..49
IPR016197Chromo domain-likeSUPERFAMILY54160Chromo domain-likecoord: 8..63

Blast
[Close]
BLAST of TCONS_00010823-protein vs. Swiss-Prot (Human)
Match: CBX8 (Chromobox protein homolog 8 OS=Homo sapiens GN=CBX8 PE=1 SV=3)

HSP 1 Score: 79.337 bits (194), Expect = 1.265e-16
Identity = 37/66 (56.06%), Postives = 48/66 (72.73%), Query Frame = 0 
Query:   11 VFAAEKILKKRYKKGRAEYLVKWQGYSSKFNTWEPVENILDERLLESYK------ALHPPGNRGKK 70
            VFAAE +LK+R +KGR EYLVKW+G+S K++TWEP ENILD RLL +++       L+ P  RG K
Sbjct:   10 VFAAEALLKRRIRKGRMEYLVKWKGWSQKYSTWEPEENILDARLLAAFEEREREMELYGPKKRGPK 75
The following BLAST results are available for this feature:
BLAST of TCONS_00010823-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CBX81.265e-1656.06Chromobox protein homolog 8 OS=Homo sapiens GN=CBX... [more]
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