TCONS_00011337-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00011337-protein
Unique NameTCONS_00011337-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length911

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00011337-protein ID=TCONS_00011337-protein|Name=TCONS_00011337-protein|organism=Clytia hemisphaerica|type=polypeptide|length=911bp
MWTRDLAIAIGLVCLVQSVTCSMQDVKKCPNHEVFTGSRKLDGICHGIQI
DDQISFPNYLGHRNLNEAIKSISLYKVFIKLGCSNQFERFVCALHFPKCN
NKKPPCRQICELSRDSCAPKLMEFGMKWPVFLGCGRFPDSEYADVCIGGT
KKATVAPAPERSSIPTTTTPKSFPTTVKQEPVRQSNMKTTASQTAEKSKC
MSIADNKIIMKGFCRNRPYNYTIMKTKSEIEEANLVGNQFEPLFKVECSE
HIQDFICSYYLPKCEANKPLPPCRSLCKEARKGCKELMNKFGFQWPRHLR
CRHFPKRNQEGNNCFMVKKKVPPKPTLTPKLPVKGECIAFEKQPVPFKGK
YCKVLPYDRTLKMKKTTLNSVGSKVVRYIPFFQRCSKHLELFVCSVHYPK
CESGLVLPPCRKVCEAARNGCKDTVARFGFSWPEKLNCHHYPVQNENKDN
CFMTDGEEIQKIRPSIIKPNKTCNLVREVLRNKRICQQLPYSYTSIDKLK
AISGAKRMIEMFNPLYAVRCSDHLQNFICSYHFPKCELNKVLPPCRELCE
ASRNGCSLLMQKYGFQWPDQLKCDRFPKKVINENNCFSGEEPRTNKQKAT
QKTTKRTQMTTKLPNSSASQKPKTSEMASKPNQCQELIRTHESSNFCNKL
PYKYTSIGKSPYYAKSFLEVQLYEPLFKTGCSDQMQNFICSYYFPKCELN
KVLPPCRELCETSRNGCSLLMQKYGFQLPEELKCDRFPKKDINENNCFAG
GEPRTTKATQMTTKMTRITTNLPIFSTSLKPKTSEMATKPNQCQELIRKS
SNVCNKLPYKYTSIEKSSISYVKNSILEVQLYEPLFKAGCSDQMQNFICS
YYFPKCELNKVLPPCREYCKDATNGCSQLMEEFGFQLPKYLKCDRFPKRN
INGDNCFSGKI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006357XLOC_006357Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00011337TCONS_00011337Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020067Frizzled_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020067Frizzled domainSMARTSM00063FRI_4coord: 343..456
e-value: 3.3E-16
score: 69.9
coord: 199..313
e-value: 1.3E-21
score: 87.8
coord: 28..151
e-value: 2.2E-17
score: 73.8
coord: 477..585
e-value: 8.4E-20
score: 81.8
coord: 792..911
e-value: 3.3E-18
score: 76.5
coord: 633..752
e-value: 3.7E-18
score: 76.3
IPR020067Frizzled domainGENE3D1.10.2000.10coord: 334..456
e-value: 3.0E-22
score: 78.7
IPR020067Frizzled domainPFAMPF01392Fzcoord: 644..740
e-value: 2.1E-20
score: 73.4
coord: 212..308
e-value: 5.1E-23
score: 81.8
coord: 348..445
e-value: 3.3E-18
score: 66.3
coord: 44..140
e-value: 8.3E-22
score: 77.9
coord: 793..900
e-value: 2.3E-20
score: 73.3
coord: 484..579
e-value: 6.2E-21
score: 75.1
IPR020067Frizzled domainGENE3D1.10.2000.10coord: 15..144
e-value: 3.3E-23
score: 81.8
coord: 615..744
e-value: 8.2E-25
score: 87.0
coord: 181..311
e-value: 1.3E-28
score: 99.3
coord: 457..583
e-value: 5.6E-26
score: 90.8
coord: 773..903
e-value: 1.7E-25
score: 89.2
IPR020067Frizzled domainPROSITEPS50038FZcoord: 332..454
score: 16.324
IPR020067Frizzled domainPROSITEPS50038FZcoord: 629..750
score: 19.049
IPR020067Frizzled domainPROSITEPS50038FZcoord: 195..317
score: 20.5
IPR020067Frizzled domainPROSITEPS50038FZcoord: 24..149
score: 16.755
IPR020067Frizzled domainPROSITEPS50038FZcoord: 788..909
score: 19.617
IPR020067Frizzled domainPROSITEPS50038FZcoord: 468..589
score: 19.227
IPR020067Frizzled domainSUPERFAMILY63501Frizzled cysteine-rich domaincoord: 483..579
IPR020067Frizzled domainSUPERFAMILY63501Frizzled cysteine-rich domaincoord: 348..453
IPR020067Frizzled domainSUPERFAMILY63501Frizzled cysteine-rich domaincoord: 644..742
IPR020067Frizzled domainSUPERFAMILY63501Frizzled cysteine-rich domaincoord: 209..316
IPR020067Frizzled domainSUPERFAMILY63501Frizzled cysteine-rich domaincoord: 44..147
IPR020067Frizzled domainSUPERFAMILY63501Frizzled cysteine-rich domaincoord: 793..902
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 587..631
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 157..191
NoneNo IPR availableCDDcd07066CRD_FZcoord: 345..456
e-value: 2.49622E-18
score: 81.399
NoneNo IPR availableCDDcd07066CRD_FZcoord: 43..148
e-value: 2.60865E-23
score: 96.0366

Blast
[Close]
BLAST of TCONS_00011337-protein vs. Swiss-Prot (Human)
Match: FZD2 (Frizzled-2 OS=Homo sapiens GN=FZD2 PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 7.000e-24
Identity = 55/119 (46.22%), Postives = 72/119 (60.50%), Query Frame = 0 
Query:  199 KCMSIADNKI---IMKGFCRNRPYNYTIMKT---KSEIEEANLVGNQFEPLFKVECSEHIQDFICSYYLPKCEA-NKPLPPCRSLCKEARKGCKELMNKFGFQWPRHLRCRHFPKRNQE 310
            K +SI D+     I    C +  YN TIM      +  E+A L  +QF PL KV+CS  ++ F+CS Y P C    + +PPCRS+C+ AR+GC+ LMNKFGFQWP  LRC HFP+   E
Sbjct:   29 KGISIPDHGFCQPISIPLCTDIAYNQTIMPNLLGHTNQEDAGLEVHQFYPLVKVQCSPELRFFLCSMYAPVCTVLEQAIPPCRSICERARQGCEALMNKFGFQWPERLRCEHFPRHGAE 147

HSP 2 Score: 83.5741 bits (205), Expect = 1.745e-16
Identity = 40/97 (41.24%), Postives = 56/97 (57.73%), Query Frame = 0 
Query:  668 LEVQLYEPLFKTGCSDQMQNFICSYYFPKCE-LNKVLPPCRELCETSRNGCSLLMQKYGFQLPEELKCDRFPKKD-----INENNCFAGGEPRTTKA 758
            LEV  + PL K  CS +++ F+CS Y P C  L + +PPCR +CE +R GC  LM K+GFQ PE L+C+ FP+       + +N+   G     T A
Sbjct:   71 LEVHQFYPLVKVQCSPELRFFLCSMYAPVCTVLEQAIPPCRSICERARQGCEALMNKFGFQWPERLRCEHFPRHGAEQICVGQNHSEDGAPALLTTA 167

HSP 3 Score: 83.1889 bits (204), Expect = 2.132e-16
Identity = 39/99 (39.39%), Postives = 59/99 (59.60%), Query Frame = 0 
Query:  485 ICQQLPYSYTSIDKLKAISG---AKRMIEMFNPLYAVRCSDHLQNFICSYHFPKCE-LNKVLPPCRELCEASRNGCSLLMQKYGFQWPDQLKCDRFPKK 579
            +C  + Y+ T +  L   +    A   +  F PL  V+CS  L+ F+CS + P C  L + +PPCR +CE +R GC  LM K+GFQWP++L+C+ FP+ 
Sbjct:   46 LCTDIAYNQTIMPNLLGHTNQEDAGLEVHQFYPLVKVQCSPELRFFLCSMYAPVCTVLEQAIPPCRSICERARQGCEALMNKFGFQWPERLRCEHFPRH 144
The following BLAST results are available for this feature:
BLAST of TCONS_00011337-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FZD27.000e-2446.22Frizzled-2 OS=Homo sapiens GN=FZD2 PE=1 SV=1[more]
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