TCONS_00011556-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00011556-protein
Unique NameTCONS_00011556-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length139

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00011556-protein ID=TCONS_00011556-protein|Name=TCONS_00011556-protein|organism=Clytia hemisphaerica|type=polypeptide|length=139bp
MAAPVTVPRNFRLLEELEEGQKGGDGTVSWGLENDDDMELVRWTGMILGP
PRTVFENRIYNLSLVCGQKYPNEVPTVRFTTRVNMSCVDSAGKVEAKLVG
VLAKWQRTYTIKTVLTELRRIMTAKENCKLSQPPEGSSY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006476XLOC_006476Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00011556TCONS_00011556Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000608UBQ-conjugat_E2
IPR016135UBQ-conjugating_enzyme/RWD
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 11..139
e-value: 9.4E-7
score: 38.4
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 12..127
e-value: 2.5E-18
score: 66.0
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBIQUITIN_CONJUGAT_2coord: 11..139
score: 17.839
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10coord: 4..139
e-value: 1.3E-31
score: 108.9
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 6..139

Blast
[Close]
BLAST of TCONS_00011556-protein vs. Swiss-Prot (Human)
Match: UB2V2 (Ubiquitin-conjugating enzyme E2 variant 2 OS=Homo sapiens GN=UBE2V2 PE=1 SV=4)

HSP 1 Score: 194.126 bits (492), Expect = 6.113e-65
Identity = 92/137 (67.15%), Postives = 113/137 (82.48%), Query Frame = 0 
Query:    5 VTVPRNFRLLEELEEGQKG-GDGTVSWGLENDDDMELVRWTGMILGPPRTVFENRIYNLSLVCGQKYPNEVPTVRFTTRVNMSCV-DSAGKVEAKLVGVLAKWQRTYTIKTVLTELRRIMTAKENCKLSQPPEGSSY 139
            V VPRNFRLLEELEEGQKG GDGTVSWGLE+D+DM L RWTGMI+GPPRT +ENRIY+L + CG KYP   P+VRF T++NM+ + +S+G V+A+ + VLAKWQ +Y+IK VL ELRR+M +KEN KL QPPEG +Y
Sbjct:    7 VKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVECGPKYPEAPPSVRFVTKINMNGINNSSGMVDARSIPVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQTY 143
The following BLAST results are available for this feature:
BLAST of TCONS_00011556-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UB2V26.113e-6567.15Ubiquitin-conjugating enzyme E2 variant 2 OS=Homo ... [more]
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