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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00011650-protein ID=TCONS_00011650-protein|Name=TCONS_00011650-protein|organism=Clytia hemisphaerica|type=polypeptide|length=910bp
MASSSADQEELLLALMSMGFEYENCRKVIDGGITVLEDAVQRLMNPDSEP
SSQPSPQQATTTVTTPSNVEPTQSSSIFSQQFSQQPSEESSKVKSRYERQ
RKEQEEFEKSEFKQAELLRKKQRLEDRKLKQNILKEIKSDRKQHFKLTDD
NQSSSTSNDQQSEKDRKRKEREEYEAKQKEKRAEDWKRVQAEKRKERQRV
LTQIENDKQSKKHRAASPPHQGISDGTLTVDDGQTPTSSNVKTSPEKKTT
CRIQVNFPDRSSQNYTLPVDSTLENLNHICSEHLSTTGDNVKYSFVQTFP
RKTFTEDHYTKTLQELGLCPSCRLILQPYQQPSSNEQNSDSPNITASQPQ
NASGLNETPNQQSPNPEEPSIELLSPESQAVGQAEEPMVATPAVRPCLGS
RLLQGDLDNHIEDDAMMDVGNPSDDEEPDEDIANPDLIQQAIQRRLTEQA
QEGNHDYHASSRRITSLQKSSAVFIAQQLIKKEKHIVENIQYLNSTTADL
IIKALQRSNNLTTELLNILQPCKLKEINLDFCRLASVDLLYALKSHQNLR
RISLKSVTCVSDRLVETLVKNIPRITYLNLSDCEAIVGSFLTATRGLSRL
KSLNLSRTKLKDEYTRNFLRMAIAKDLEELSLNRCNITNAALDLEEDFPS
ITALSVDESKVTSLSFLEKMSNLRSLSVKKTSISDNDMTFVAALKHLHAL
ELHSTHITHEGLSHLHAKRLVRFSFPDRMYVTNESIKVIEDFPLTALDLT
NFVHLDDGCIPSIRKVKSLKHLYLTQLSKITDNGVIQLKVLRDLETLNLR
HTNVTSSITPIFEALRLLHTLDLTGTKIDNELLTSLSLCLNLVKLNLSHT
RIDDEGLITLNAPRLSILTLDGTDVTMQAVNRLLLKCTSLSWVRNASKNV
LYERESMDET Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 157..196 |
| None | No IPR available | COILS | Coil | Coil | coord: 107..127 |
| None | No IPR available | GENE3D | 3.10.20.90 | | coord: 239..330
e-value: 2.8E-13
score: 49.4 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 43..111 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 138..249 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 331..371 |
| IPR001012 | UBX domain | SMART | SM00166 | ubx_3 | coord: 242..328
e-value: 7.6E-11
score: 52.0 |
| IPR001012 | UBX domain | PFAM | PF00789 | UBX | coord: 246..327
e-value: 1.5E-11
score: 44.2 |
| IPR001012 | UBX domain | PROSITE | PS50033 | UBX | coord: 246..326
score: 14.923 |
| IPR006553 | Leucine-rich repeat, cysteine-containing subtype | SMART | SM00367 | LRR_CC_2 | coord: 839..863
e-value: 39.0
score: 9.9
coord: 670..694
e-value: 300.0
score: 3.0
coord: 766..791
e-value: 14.0
score: 13.5
coord: 546..571
e-value: 17.0
score: 12.8 |
| IPR032675 | Leucine-rich repeat domain, L domain-like | GENE3D | 3.80.10.10 | | coord: 655..723
e-value: 5.1E-7
score: 28.3 |
| IPR032675 | Leucine-rich repeat domain, L domain-like | GENE3D | 3.80.10.10 | | coord: 462..654
e-value: 6.0E-15
score: 54.3 |
| IPR032675 | Leucine-rich repeat domain, L domain-like | GENE3D | 3.80.10.10 | | coord: 801..909
e-value: 1.5E-10
score: 40.0 |
| IPR032675 | Leucine-rich repeat domain, L domain-like | GENE3D | 3.80.10.10 | | coord: 730..800
e-value: 1.3E-5
score: 24.2 |
| IPR032675 | Leucine-rich repeat domain, L domain-like | SUPERFAMILY | 52058 | L domain-like | coord: 508..893 |
| IPR001611 | Leucine-rich repeat | PFAM | PF13516 | LRR_6 | coord: 839..860
e-value: 0.035
score: 14.1 |
| IPR029071 | Ubiquitin-related domain | SUPERFAMILY | 54236 | Ubiquitin-like | coord: 191..329 |
Blast
The following BLAST results are available for this feature:
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