TCONS_00011719-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00011719-protein
Unique Name	TCONS_00011719-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	543

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00011719-protein ID=TCONS_00011719-protein|Name=TCONS_00011719-protein|organism=Clytia hemisphaerica|type=polypeptide|length=543bp
MEKMDIRPASTPKSQKVFYGVGHILNDLCANCWFSYVLLYWTKIVGLSET
DAGLLLLIGQVADAVSTIFIGYACDRTKFRWYGKRKLWHLIGCACVLVSF
PFIFNVCLSCEDASETSKMFYYATFVILFQFGWASTENSHLALIPEIAKR
TSDIVQLNAIRSGFFFICGIFVYGLTWILLGGAEGVEVDPSLAPQFKYLS
LVVVAVGFFFVTIFHFGTKEEKYCPPSSHDLESADTNSEGSTTTNKDKIK
TWKDWLRDSRFYKTGLLYMCTRLSINIFQSFLVLYLTDALHFQKEAIAYF
PLIVLICGVVTSSFMQKITKQIGYQLTYVIGASLMVAGSVWLFVVTKEAR
QSVYGAVSVVGISISIMLVTALAKTAELIGKNKESGAFVYSCMSFLDKLS
TGLVIFAIQVLKPTAENRYQCSDCEWFSKITQSVVPGGFAMIGFLAMVLL
FPSEYTCLRKISNDLKPSVSRSNIISNPSNEYEKQSQEYQTKNPSDMDIY
YSTETEDRINNHFDETVKNVSLGMQQTSLDIPPTEKNQKFDNC

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_006588	XLOC_006588	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00011719	TCONS_00011719	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR020846	MFS_dom

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1250.20		coord: 245..456 e-value: 3.0E-16 score: 58.9
None	No IPR available	PFAM	PF13347	MFS_2	coord: 18..449 e-value: 1.0E-32 score: 113.1
None	No IPR available	GENE3D	1.20.1250.20		coord: 15..233 e-value: 2.3E-16 score: 59.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 223..245
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 472..493
IPR020846	Major facilitator superfamily domain	CDD	cd06174	MFS	coord: 17..180 e-value: 5.55909E-5 score: 43.0713
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 16..452

Blast

[Close]

BLAST of TCONS_00011719-protein vs. Swiss-Prot (Human)
Match: MFS12 (Major facilitator superfamily domain-containing protein 12 OS=Homo sapiens GN=MFSD12 PE=1 SV=2)

HSP 1 Score: 320.472 bits (820), Expect = 6.221e-104
Identity = 190/469 (40.51%), Postives = 270/469 (57.57%), Query Frame = 0

Query:   16 KVFYGVGHILNDLCANCWFSYVLLYWTKIVGLSETDAGLLLLIGQVADAVSTIFIGYACDRTK--FRWYGKRKLWHLIGCACVLVSFPFIFNVCLSCEDAS-ETSKMFYYATFVILFQFGWASTENSHLALIPEIAKRTSDIVQLNAIRSGFFFICGIFVYGLTWILLGGAEGVEVDPSL------------APQFKYLSLVVVAVGFFFVTIFHFGTKEEKYCPPSSHDLESADTNSEGSTTTNKDKIKTWKDWLRDSRFYKTGLLYMCTRLSINIFQSFLVLYLTDALHFQKEAIAYFPLIVLICGVVTSSFMQKITKQIGYQLTYVIGASLMVAGSVWLFVVTKEARQSVYGAVSVVGISISIMLVTALAKTAELIGKNKESGAFVYSCMSFLDKLSTGLVIFAIQVLKPTAENRYQCSDCEWFSKITQSVVPGGFAM--IGFLAMVLLFPSEYTCLRKISNDLKP 467
            ++ Y VGH LNDLCA+ WF+Y+LLY   +   S   AGLLLL+GQVAD + T  +GY  DR       YG RK WHL+G  CVL+SFPFIF+ CL C  A+ E + + YY  F+++FQFGWAST+ SHL+LIPE+     + V+L A+R  F  +  I VYG  W+LL       V+P+              P F+ LSL+VV VG  F  +FH GT+E +      H  E  +     +  T +  +  WK WLR+  FY+ G+LYM TRL +N+ Q+++ +YLT +LH  K+ IA  PL++ + G ++S  M+ I K IG  +TY  G  +++A + W+  + +    +VY A  ++G   + +LVT+LA TA+LIG +  SGAFVY  MSFLDK++ GL + AIQ L P   +   C  C  F       V GG  +     L  +LL+P+    LR+   D +P
Sbjct:   22 RLSYAVGHFLNDLCASMWFTYLLLYLHSVRAYSSRGAGLLLLLGQVADGLCTPLVGYEADRAASCCARYGPRKAWHLVGTVCVLLSFPFIFSPCLGCGAATPEWAALLYYGPFIVIFQFGWASTQISHLSLIPELVTNDHEKVELTALRYAFTVVANITVYGAAWLLLHLQGSSRVEPTQDISISDQLGGQDVPVFRNLSLLVVGVGAVFSLLFHLGTRERR----RPHAEEPGEHTPLLAPATAQ-PLLLWKHWLREPAFYQVGILYMTTRLIVNLSQTYMAMYLTYSLHLPKKFIATIPLVMYLSGFLSSFLMKPINKCIGRNMTYFSGLLVILAFAAWV-ALAEGLGVAVYAAAVLLGAGCATILVTSLAMTADLIGPHTNSGAFVYGSMSFLDKVANGLAVMAIQSLHP-CPSELCCRACVSFYHWAMVAVTGGVGVAAALCLCSLLLWPTR---LRRWDRDARP 480

The following BLAST results are available for this feature:

BLAST of TCONS_00011719-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00011719-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
MFS12	6.221e-104	40.51	Major facilitator superfamily domain-containing pr...	[more]

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TCONS_00011719-protein (polypeptide) - C. hemisphaerica