TCONS_00011719 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011719
Unique NameTCONS_00011719
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2011

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011719 ID=TCONS_00011719|Name=TCONS_00011719|organism=Clytia hemisphaerica|type=transcript|length=2011bp
TACACAATGAATTGTGATGACTCAACACAACGTCAACAAACCTTCCACAA
AATGTGTTCCTACACAAATGAGGAGGAGAACCAATCACCTCTTTTCATAT
CAGACCACGTGACAATATCACTTCAGATGTGTATAAATGGATGGAAATAT
GGACAATCTCTAAACAGTGAGTGCAGCTCATAAAGTAAGAAACTTTCTTG
TTTCATGAAAAGCAACTTAAAGACGAAGAGCGCGCTTTTGTTGGATTGTG
TTTTTTCCTCCAAATTTTCAACCAATCATGGAAAAGATGGATATTCGCCC
TGCCTCAACGCCCAAATCACAAAAAGTCTTCTATGGAGTAGGTCACATTT
TGAACGATCTCTGCGCCAACTGCTGGTTCAGCTACGTACTTTTGTATTGG
ACTAAAATCGTCGGTCTTTCCGAAACTGACGCTGGGTTGTTGTTACTGAT
CGGACAAGTAGCGGATGCCGTCAGCACCATTTTTATCGGCTACGCATGCG
ATCGAACAAAGTTTCGTTGGTATGGAAAACGTAAATTGTGGCATCTGATT
GGCTGTGCGTGTGTTCTGGTCAGTTTTCCTTTCATCTTCAATGTTTGTCT
CAGCTGTGAAGATGCATCGGAAACAAGCAAAATGTTTTATTATGCGACTT
TCGTAATTCTCTTTCAATTTGGATGGGCGTCCACTGAAAACTCCCATTTA
GCGTTGATTCCAGAGATCGCCAAACGAACCTCCGATATCGTTCAATTGAA
TGCTATCAGGTCTGGATTCTTTTTCATTTGTGGAATATTCGTTTATGGCT
TGACGTGGATTTTATTGGGTGGTGCCGAAGGCGTTGAAGTCGACCCATCA
CTCGCCCCTCAATTCAAATACCTTTCACTCGTGGTGGTGGCAGTGGGTTT
CTTTTTTGTCACCATTTTCCACTTcggaacaaaagaagaaaaatactGTC
CGCCCTCCTCCCATGACTTGGAATCCGCTGACACCAATTCTGAGGGATCA
ACAACAACGAATAAGGATAAGATCAAAACATGGAAAGATTGGTTGAGGGA
TTCTCGCTTCTACAAGACAGGACTTTTGTACATGTGTACTCGATTGTCTA
TAAACATCTTCCAATCATTCCTCGTCCTATATTTGACAGATGCCTTACAT
TTTCAAAAGGAAGCAATAGCATACTTCCCATTGATCGTTCTAATCTGTGG
CGTTGTCACTAGTTCTTTTATGCAGAAGATCACAAAGCAGATCGGCTACC
AGTTAACGTATGTGATTGGAGCTTCGCTAATGGTTGCTGGAAGTGTCTGG
TTGTTCGTGGTTACAAAGGAAGCGCGTCAATCAGTTTATGGGGCGGTCAG
TGTGGTGGGCATAAGTATCTCTATTATGTTAGTGACAGCGCTTGCAAAGA
CCGCTGAGCTTATTGGTAAAAACAAAGAATCCGGAGCGTTTGTATACTCG
TGTATGAGTTTCTTGGACAAACTTTCCACTGGTTTAGTGATTTTTGCCAT
ACAAGTTTTGAAACCAACCGCTGAAAACAGataCCAATGTAGCGATTGTG
aatggttttcaaaaatcacTCAATCAGTGGTTCCTGGTGGATTCGCCATG
ATTGGTTTCTTAGCAATGGTTCTTCTTTTCCCTTCGGAGTACACTTGTTT
GAGGAAAATATCGAATGATTTGAAACCATCCGTCAGTCGCTCAAACATCA
TATCCAATCCATCAAACGAATACGAAAAGCAATCACAAGAATATCAGACA
AAGAACCCGTCTGACATGGACATTTACTATTCAACAGAAACAGAAGATCG
CATCAATAATCATTTCGACGAAACCGTAAAGAATGTATCCTTGGGAATGC
AGCAAACGAGCCTTGATATTCCGCCAACCGAAAAGaatcaaaaatttgat
aattgctgaaacactttttttagtttttaagttGATGTGTACATATGAAC
CAATAATATTCTGTAAATAAAGTTACCGTTTTTATAGTTAAAAATCtact
agaaaaagaaa
Run BLAST on NCBI

protein sequence of TCONS_00011719-protein

>TCONS_00011719-protein ID=TCONS_00011719-protein|Name=TCONS_00011719-protein|organism=Clytia hemisphaerica|type=polypeptide|length=543bp
MEKMDIRPASTPKSQKVFYGVGHILNDLCANCWFSYVLLYWTKIVGLSET
DAGLLLLIGQVADAVSTIFIGYACDRTKFRWYGKRKLWHLIGCACVLVSF
PFIFNVCLSCEDASETSKMFYYATFVILFQFGWASTENSHLALIPEIAKR
TSDIVQLNAIRSGFFFICGIFVYGLTWILLGGAEGVEVDPSLAPQFKYLS
LVVVAVGFFFVTIFHFGTKEEKYCPPSSHDLESADTNSEGSTTTNKDKIK
TWKDWLRDSRFYKTGLLYMCTRLSINIFQSFLVLYLTDALHFQKEAIAYF
PLIVLICGVVTSSFMQKITKQIGYQLTYVIGASLMVAGSVWLFVVTKEAR
QSVYGAVSVVGISISIMLVTALAKTAELIGKNKESGAFVYSCMSFLDKLS
TGLVIFAIQVLKPTAENRYQCSDCEWFSKITQSVVPGGFAMIGFLAMVLL
FPSEYTCLRKISNDLKPSVSRSNIISNPSNEYEKQSQEYQTKNPSDMDIY
YSTETEDRINNHFDETVKNVSLGMQQTSLDIPPTEKNQKFDNC
Run BLAST on NCBI

transcript from alignment at sc0000132:42448..46691+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011719 ID=TCONS_00011719|Name=TCONS_00011719|organism=Clytia hemisphaerica|type=transcript|length=4244bp|location=Sequence derived from alignment at sc0000132:42448..46691+ (Clytia hemisphaerica)
TACACAATGAATTGTGATGACTCAACACAACGTCAACAAACCTTCCACAA AATGTGTTCCTACACAAATGAGGAGGAGAACCAATCACCTCTTTTCATAT CAGACCACGTGACAATATCACTTCAGATGTGTATAAATGGATGGAAATAT GGACAATCTCTAAACAGTGAGTGCAGCTCATAAAGTAAGAAACTTTCTTG TTTCATGAAAAGCAACTTAAAGACGAAGAGCGCGCTTTTGTTGGATTGTG TTTTTTCCTCCAAATGTAAGTATTCTTTCTTTCTCAACAAACTTGACTTT TGACACGTTGACATTTGCATTGCGTTAAACCTGCTCATTTTTCTTAATAG TTTCAACCAATCATGGAAAAGATGGATATTCGCCCTGCCTCAACGCCCAA ATCACAAAAAGTCTTCTATGGAGTAGGTCACATTTTGAACGATCTCTGCG CCAACTGCTGGTTCAGCTACGTACTTTTGTATTGGACTAAAATCGTCGGT CTTTCCGAAACTGACGCTGGGTTGTTGTTACTGATCGGACAAGTAGCGGA TGCCGTCAGCACCATTTTTATCGGCTACGCATGCGATCGAACAAAGTTTC GTTGGTATGGAAAACGTAAATTGTGGCATCTGATTGGCTGTGCGTGTGTT CTGGTCAGTTTTCCTTTCATCTTCAATGTTTGTCTCAGCTGTGAAGATGC ATCGGAAACAAGCAAAATGTTTTATTATGCGACTTTCGTAATTCTCTTTC AATTTGGATGGGCGTCCACTGAAAACTCCCATTTAGCGTTGATTCCAGAG ATCGCCAAACGAACCTCCGATATCGTTCAATTGAATGCTATCAGGTAAGc ttcatttttatgaaaagtaaGAATACCTGTTATTAATGATCTTTTAAACT GTAAGGACAGTCCTTTCCGCATGTTTTCCATTTACACGTCATTCTTTGTC ATCTTCAAGGTCTGGATTCTTTTTCATTTGTGGAATATTCGTTTATGGCT TGACGTGGATTTTATTGGGTGGTGCCGAAGGCGTTGAAGTCGACCCATCA CTCGCCCCTCAATTCAAAGTAAGAAAACTCATTTTTAATGGTTACGTCAC ATACATTGAATTTCTCGAAACAATTAATTCATGACAGTGATATGAGCTTC AAAAACCTCGAAGAGATCATgaacaaaaaaatctaaataaagatgACCAC ATACTCGGCTTACTTTTCAAATAAGAAATAGCGCTTTTTTGTTATgtaaa acaaaaaactatttcCATGCTTTACGAAGAGCCCAAGCTCCTTCACTTAC TACATCTTGCACAAAGAACAGATCTGACAAACCTGTTGCTTTTCTTTCCA GTACCTTTCACTCGTGGTGGTGGCAGTGGGTTTCTTTTTTGTCACCATTT TCCACTTcggaacaaaagaagaaaaatactGCCCGCCCTCCTCCCATGAC TTGGAATCCGCTGACACCAATTCTGAGGGATCAACAACAACGAATAAGGA TAAGATCAAAACATGGAAAGATTGGTTGAGGGATTCTCGCTTCTACAAGA CAGGACTTTTGTACATGTGTACTCGATTGTCTATAAACATCTTCCAATCA TTCCTCGTCCTATATTTGACAGATGCCTTACATTTTCAAAAGGTAAACAT CCAAATCTTGACCGATATATTTTTTAGCTTGTCAAGAACAAACACAAGGT TAATGTAAAATAAacgaaaacttttttctatcTTCTCAGGAAGCAATAGC ATACTTCCCATTGATCGTTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNatgcattgtgggattgtttcgagt gtattacaatagaattccctcgaggaattcctaagagatttctattgtaa tacactcgaaacaatcccacaatacatcgtttttttagaaaaatcaaaaa ctccgataaggtctattgtaaaaaaatcagaaattttttcaacctTGAAT TTACTCAATTTAAGgctcaaagtgccgtaaaactAGAACTTCACAGCCTC AAAGAACATTTNGGTTTCTTTTTTGTCACCATTTTCCACTTcggaacaaa agaagaaaaatactGTCCGCCCTCCTCCCATGACTTGGAATCCGCTGACA CCAATTCTGAGGGATCAACAACAACGAATAAGGATAAGATCAAAACATGG AAAGATTGGTTGAGGGATTCTCGCTTCTACAAGACAGGACTTTTGTACAT GTGTACTCGATTGTCTATAAACATCTTCCAATCATTCCTCGTCCTATATT TGACAGATGCCTTACATTTTCAAAAGGTAAACATCCAAATCTTGACCGAT ATATTTTTTAGCTTGTCAAGAACAAACACAAGGTTAATGTAAAATAAacg aaaacttttttctatcTTCTCAGGAAGCAATAGCATACTTCCCATTGATC GTTCTAATCTGTGGCGTTGTCACTAGTTCTTTTATGCAGAAGATCACAAA GCAGATCGGCTACCAGGTATACCCTTATCATATATTACATATTTTTTGCA TAACTTTGATAAATTATACCTCGTGTTTGACGTAACCTTGCAAAAATCAT CCGGTGCAATCAAGCGATTCCTGATTACTCATTAAATCACAAGAAGCCTA CCTGCCTTAATGACTTCCTTTTGATAATTGATCATGTCGAATGAGCAGCT TCCTTATTCCCTTCACTAGTTAACGTATGTGATTGGAGCTTCGCTAATGG TTGCTGGAAGTGTCTGGTTGTTCGTGGTTACAAAGGAAGCGCGTCAATCA GTTTATGGGGCGGTCAGTGTGGTGGGCATAAGTATCTCTATTATGTTAGT GACAGCGCTTGCAAAGACCGCTGAGCTTATTGGTAAAAACAAAGAATCCG GAGCGTTTGTATACTCGTGTATGAGTTTCTTGGACAAACTTTCCACTGGT TTAGTGATTTTTGCCATACAAGTTTTGAAACCAACCGCTGAAAACAGGTC AGTTTNctccaatgataccaaatttataaagattgaagaattccttcaaa agttattggtaaatgaaaaaagagtgcacacttatcgtgaatagacttta gctCTTATAAAAATGTACTGCGGACTAATTTATCTAACGAGGNTTTTGCC ATACAAGTTTTGAAACCAACCGCTGAAAACAGGTCAGTTTTTTATCTTAc ttttttaacttaaaaaataaaacgaggctaaaaatagaccttatcggagt tttttatttttctaaaaaagcaatgcattgtgggattgtttcgagtgtat tacaatagaattcccNAGATGACAATCATTAGTTTCTGTTTGCATTTTCA GCTCTCTTATTTATACAaactcaatttttgattttaaagataCCAATGTA GCGATTGTGaatggttttcaaaaatcacTCAATCAGTGGTTCCTGGTGGA TTCGCCATGATTGGTTTCTTAGCAATGGTTCTTCTTTTCCCTTCGGAGTA CACTTGTTTGAGGAAAAGTAAGTTATTTTCAGTTCGAGGATATTCATTTT CCTGAATCAATTTCATTCTTTTCAAAAAGAGAAATCGTTTTAGTTTCTGG TTGGAAGCTTTAAACGAGGAAAAGATCGCGTCACTTTGGTAACTTCCTTA CAAAAATATGTCCTTATTAGACCGTCATCCGATATATTGTCAGAAATGGT AACGAGATCTGACTTCACGCAAAATTAACAAAGCTACCGCAAGTACAAAC ATGTCGAATGACACACCTATTAAATCTTCCTGctaaaacaaagcaaaaca gacaataaattatattcaaatttactTCTCTATCCTTTCAGTATCGAATG ATTTGAAACCATCCGTCAGTCGCTCAAACATCATATCCAATCCATCAAAC GAATACGAAAAGCAATCACAAGAATATCAGACAAAGAACCCGTCTGACAT GGACATTTACTATTCAACAGAAACAGAAGATCGCATCAATAATCATTTCG ACGAAACCGTAAAGAATGTATCCTTGGGAATGCAGCAAACGAGCCTTGAT ATTCCGCCAACCGAAAAGaatcaaaaatttgataattgctgaaacacttt ttttagtttttaagttGATGTGTACATATGAACCAATAATATTCTGTAAA TAAAGTTACCGTTTTTATAGTTAAAAATCtactagaaaaagaaa

Coding sequence (CDS) from alignment at sc0000132:42448..46691+

>TCONS_00011719 ID=TCONS_00011719|Name=TCONS_00011719|organism=Clytia hemisphaerica|type=CDS|length=1632bp|location=Sequence derived from alignment at sc0000132:42448..46691+ (Clytia hemisphaerica)
ATGGAAAAGATGGATATTCGCCCTGCCTCAACGCCCAAATCACAAAAAGT
CTTCTATGGAGTAGGTCACATTTTGAACGATCTCTGCGCCAACTGCTGGT
TCAGCTACGTACTTTTGTATTGGACTAAAATCGTCGGTCTTTCCGAAACT
GACGCTGGGTTGTTGTTACTGATCGGACAAGTAGCGGATGCCGTCAGCAC
CATTTTTATCGGCTACGCATGCGATCGAACAAAGTTTCGTTGGTATGGAA
AACGTAAATTGTGGCATCTGATTGGCTGTGCGTGTGTTCTGGTCAGTTTT
CCTTTCATCTTCAATGTTTGTCTCAGCTGTGAAGATGCATCGGAAACAAG
CAAAATGTTTTATTATGCGACTTTCGTAATTCTCTTTCAATTTGGATGGG
CGTCCACTGAAAACTCCCATTTAGCGTTGATTCCAGAGATCGCCAAACGA
ACCTCCGATATCGTTCAATTGAATGCTATCAGGTCTGGATTCTTTTTCAT
TTGTGGAATATTCGTTTATGGCTTGACGTGGATTTTATTGGGTGGTGCCG
AAGGCGTTGAAGTCGACCCATCACTCGCCCCTCAATTCAAATACCTTTCA
CTCGTGGTGGTGGCAGTGGGTTTCTTTTTTGTCACCATTTTCCACTTcgg
aacaaaagaagaaaaatactGTCCGCCCTCCTCCCATGACTTGGAATCCG
CTGACACCAATTCTGAGGGATCAACAACAACGAATAAGGATAAGATCAAA
ACATGGAAAGATTGGTTGAGGGATTCTCGCTTCTACAAGACAGGACTTTT
GTACATGTGTACTCGATTGTCTATAAACATCTTCCAATCATTCCTCGTCC
TATATTTGACAGATGCCTTACATTTTCAAAAGGAAGCAATAGCATACTTC
CCATTGATCGTTCTAATCTGTGGCGTTGTCACTAGTTCTTTTATGCAGAA
GATCACAAAGCAGATCGGCTACCAGTTAACGTATGTGATTGGAGCTTCGC
TAATGGTTGCTGGAAGTGTCTGGTTGTTCGTGGTTACAAAGGAAGCGCGT
CAATCAGTTTATGGGGCGGTCAGTGTGGTGGGCATAAGTATCTCTATTAT
GTTAGTGACAGCGCTTGCAAAGACCGCTGAGCTTATTGGTAAAAACAAAG
AATCCGGAGCGTTTGTATACTCGTGTATGAGTTTCTTGGACAAACTTTCC
ACTGGTTTAGTGATTTTTGCCATACAAGTTTTGAAACCAACCGCTGAAAA
CAGataCCAATGTAGCGATTGTGaatggttttcaaaaatcacTCAATCAG
TGGTTCCTGGTGGATTCGCCATGATTGGTTTCTTAGCAATGGTTCTTCTT
TTCCCTTCGGAGTACACTTGTTTGAGGAAAATATCGAATGATTTGAAACC
ATCCGTCAGTCGCTCAAACATCATATCCAATCCATCAAACGAATACGAAA
AGCAATCACAAGAATATCAGACAAAGAACCCGTCTGACATGGACATTTAC
TATTCAACAGAAACAGAAGATCGCATCAATAATCATTTCGACGAAACCGT
AAAGAATGTATCCTTGGGAATGCAGCAAACGAGCCTTGATATTCCGCCAA
CCGAAAAGaatcaaaaatttgataattgctga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006588XLOC_006588Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011719-exon-sc0000132-1491911889:42448..42712TCONS_00011719-exon-sc0000132-1491911889:42448..42712Clytia hemisphaericaexon
TCONS_00011719-exon-sc0000132-1510915933:42448..42712TCONS_00011719-exon-sc0000132-1510915933:42448..42712Clytia hemisphaericaexon
TCONS_00011719-exon-sc0000132-1575043694:42448..42712TCONS_00011719-exon-sc0000132-1575043694:42448..42712Clytia hemisphaericaexon
TCONS_00011719-exon-sc0000132-1491911889:42798..43291TCONS_00011719-exon-sc0000132-1491911889:42798..43291Clytia hemisphaericaexon
TCONS_00011719-exon-sc0000132-1510915933:42798..43291TCONS_00011719-exon-sc0000132-1510915933:42798..43291Clytia hemisphaericaexon
TCONS_00011719-exon-sc0000132-1575043694:42798..43291TCONS_00011719-exon-sc0000132-1575043694:42798..43291Clytia hemisphaericaexon
TCONS_00011719-exon-sc0000132-1491911889:43407..43515TCONS_00011719-exon-sc0000132-1491911889:43407..43515Clytia hemisphaericaexon
TCONS_00011719-exon-sc0000132-1510915933:43407..43515TCONS_00011719-exon-sc0000132-1510915933:43407..43515Clytia hemisphaericaexon
TCONS_00011719-exon-sc0000132-1575043694:43407..43515TCONS_00011719-exon-sc0000132-1575043694:43407..43515Clytia hemisphaericaexon
TCONS_00011719-exon-sc0000132-1491911889:43799..43826TCONS_00011719-exon-sc0000132-1491911889:43799..43826Clytia hemisphaericaexon
TCONS_00011719-exon-sc0000132-1510915933:43799..43826TCONS_00011719-exon-sc0000132-1510915933:43799..43826Clytia hemisphaericaexon
TCONS_00011719-exon-sc0000132-1575043694:43799..43826TCONS_00011719-exon-sc0000132-1575043694:43799..43826Clytia hemisphaericaexon
TCONS_00011719-exon-sc0000132-1491911889:44561..44823TCONS_00011719-exon-sc0000132-1491911889:44561..44823Clytia hemisphaericaexon
TCONS_00011719-exon-sc0000132-1510915933:44561..44823TCONS_00011719-exon-sc0000132-1510915933:44561..44823Clytia hemisphaericaexon
TCONS_00011719-exon-sc0000132-1575043694:44561..44823TCONS_00011719-exon-sc0000132-1575043694:44561..44823Clytia hemisphaericaexon
TCONS_00011719-exon-sc0000132-1491911889:44921..45013TCONS_00011719-exon-sc0000132-1491911889:44921..45013Clytia hemisphaericaexon
TCONS_00011719-exon-sc0000132-1510915933:44921..45013TCONS_00011719-exon-sc0000132-1510915933:44921..45013Clytia hemisphaericaexon
TCONS_00011719-exon-sc0000132-1575043694:44921..45013TCONS_00011719-exon-sc0000132-1575043694:44921..45013Clytia hemisphaericaexon
TCONS_00011719-exon-sc0000132-1491911889:45217..45494TCONS_00011719-exon-sc0000132-1491911889:45217..45494Clytia hemisphaericaexon
TCONS_00011719-exon-sc0000132-1510915933:45217..45494TCONS_00011719-exon-sc0000132-1510915933:45217..45494Clytia hemisphaericaexon
TCONS_00011719-exon-sc0000132-1575043694:45217..45494TCONS_00011719-exon-sc0000132-1575043694:45217..45494Clytia hemisphaericaexon
TCONS_00011719-exon-sc0000132-1491911889:45887..46014TCONS_00011719-exon-sc0000132-1491911889:45887..46014Clytia hemisphaericaexon
TCONS_00011719-exon-sc0000132-1510915933:45887..46014TCONS_00011719-exon-sc0000132-1510915933:45887..46014Clytia hemisphaericaexon
TCONS_00011719-exon-sc0000132-1575043694:45887..46014TCONS_00011719-exon-sc0000132-1575043694:45887..46014Clytia hemisphaericaexon
TCONS_00011719-exon-sc0000132-1491911889:46339..46691TCONS_00011719-exon-sc0000132-1491911889:46339..46691Clytia hemisphaericaexon
TCONS_00011719-exon-sc0000132-1510915933:46339..46691TCONS_00011719-exon-sc0000132-1510915933:46339..46691Clytia hemisphaericaexon
TCONS_00011719-exon-sc0000132-1575043694:46339..46691TCONS_00011719-exon-sc0000132-1575043694:46339..46691Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011719-proteinTCONS_00011719-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000132supercontigsc0000132:42448..46691 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.0191989 0 0.0109045 0 0 0.0305917 0.0419466 0 0.0451604 0.109706 0 0.880927 2.30493 4.64791 3.82794 4.62639 1.10586 12.0906 11.6197 11.8021 11.9861 6.02941 5.65524 1.46471 0.872925 1.18651 0.379884 68.3542 66.1682
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR020846MFS_dom
Blast
BLAST of TCONS_00011719 vs. Swiss-Prot (Human)
Match: MFS12 (Major facilitator superfamily domain-containing protein 12 OS=Homo sapiens GN=MFSD12 PE=1 SV=2)

HSP 1 Score: 320.472 bits (820), Expect = 7.647e-101
Identity = 190/469 (40.51%), Postives = 270/469 (57.57%), Query Frame = 2
Query:  323 KVFYGVGHILNDLCANCWFSYVLLYWTKIVGLSETDAGLLLLIGQVADAVSTIFIGYACDRTK--FRWYGKRKLWHLIGCACVLVSFPFIFNVCLSCEDAS-ETSKMFYYATFVILFQFGWASTENSHLALIPEIAKRTSDIVQLNAIRSGFFFICGIFVYGLTWILLGGAEGVEVDPSL------------APQFKYLSLVVVAVGFFFVTIFHFGTKEEKYCPPSSHDLESADTNSEGSTTTNKDKIKTWKDWLRDSRFYKTGLLYMCTRLSINIFQSFLVLYLTDALHFQKEAIAYFPLIVLICGVVTSSFMQKITKQIGYQLTYVIGASLMVAGSVWLFVVTKEARQSVYGAVSVVGISISIMLVTALAKTAELIGKNKESGAFVYSCMSFLDKLSTGLVIFAIQVLKPTAENRYQCSDCEWFSKITQSVVPGGFAM--IGFLAMVLLFPSEYTCLRKISNDLKP 1678
            ++ Y VGH LNDLCA+ WF+Y+LLY   +   S   AGLLLL+GQVAD + T  +GY  DR       YG RK WHL+G  CVL+SFPFIF+ CL C  A+ E + + YY  F+++FQFGWAST+ SHL+LIPE+     + V+L A+R  F  +  I VYG  W+LL       V+P+              P F+ LSL+VV VG  F  +FH GT+E +      H  E  +     +  T +  +  WK WLR+  FY+ G+LYM TRL +N+ Q+++ +YLT +LH  K+ IA  PL++ + G ++S  M+ I K IG  +TY  G  +++A + W+  + +    +VY A  ++G   + +LVT+LA TA+LIG +  SGAFVY  MSFLDK++ GL + AIQ L P   +   C  C  F       V GG  +     L  +LL+P+    LR+   D +P
Sbjct:   22 RLSYAVGHFLNDLCASMWFTYLLLYLHSVRAYSSRGAGLLLLLGQVADGLCTPLVGYEADRAASCCARYGPRKAWHLVGTVCVLLSFPFIFSPCLGCGAATPEWAALLYYGPFIVIFQFGWASTQISHLSLIPELVTNDHEKVELTALRYAFTVVANITVYGAAWLLLHLQGSSRVEPTQDISISDQLGGQDVPVFRNLSLLVVGVGAVFSLLFHLGTRERR----RPHAEEPGEHTPLLAPATAQ-PLLLWKHWLREPAFYQVGILYMTTRLIVNLSQTYMAMYLTYSLHLPKKFIATIPLVMYLSGFLSSFLMKPINKCIGRNMTYFSGLLVILAFAAWV-ALAEGLGVAVYAAAVLLGAGCATILVTSLAMTADLIGPHTNSGAFVYGSMSFLDKVANGLAVMAIQSLHP-CPSELCCRACVSFYHWAMVAVTGGVGVAAALCLCSLLLWPTR---LRRWDRDARP 480          
The following BLAST results are available for this feature:
BLAST of TCONS_00011719 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MFS127.647e-10140.51Major facilitator superfamily domain-containing pr... [more]
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