TCONS_00011839-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00011839-protein
Unique Name	TCONS_00011839-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	317

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00011839-protein ID=TCONS_00011839-protein|Name=TCONS_00011839-protein|organism=Clytia hemisphaerica|type=polypeptide|length=317bp
MVDAANGKNDLTRIGLFSELGYISIGDPYTNSNSRPFNVAASKGKQMLPG
GSKSKSALQAGYFDKNFQRIMTGEGYSDPVKRRRQDRLEKTKQNLGKAFT
PSHAGKMPSGAGSHYGTFTGPVKTFSPVAKPKKAYASPGRNFITNPSRKG
TGYGYVNVFIGKPQNYASEPYDRAKEIRRKENTDSKRMMKGASFKLNLHP
KAYFDGNPYKTDKPMPPYKEGKKDKKTVKPFMPSSPAKEIGGSKAGCFTH
YPKHSDDPYIVKKNSFRGSVAAEKNIFRPSQGPKTMPTNSIMAQHVERRY
NRQNFESAPLPPIAASS

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_006651	XLOC_006651	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00011839	TCONS_00011839	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR029358	DUF4586

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029358	Protein of unknown function DUF4586	PFAM	PF15239	DUF4586	coord: 10..296 e-value: 6.4E-105 score: 351.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 205..239

Blast

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BLAST of TCONS_00011839-protein vs. Swiss-Prot (Human)
Match: CD047 (UPF0602 protein C4orf47 OS=Homo sapiens GN=C4orf47 PE=2 SV=1)

HSP 1 Score: 301.212 bits (770), Expect = 5.950e-102
Identity = 158/308 (51.30%), Postives = 207/308 (67.21%), Query Frame = 0

Query:    4 AANGKNDLTRIGLFSELGYISIGDPYTNSNSRPFNVAASKGKQMLPGGSKSKSALQAGYFDKNFQRIMTGEGYSDPVKRRRQDRLEKTKQNLGKAFTPSHAGKMPSGAGSHYGTFTGPVKTFSPVAKPKKAYASPGRNFITNPSRKGTGYGYVNVFIGKPQNYASEPYDRAKEIRRKENTDSKRMMKGASFKLNLHPKAYFDGNPYKTDKPMPPYKEGKKDKKTVKPFMPSSPAKEIGGSKAGCFTHYPKHSDDPYIVKKNSFRGSVAAEKNIFRPSQGPKTMPTNSIMAQHVERRYNRQNFESAPLP 311
            A  GK D+ RIGLFSE+ YI++GD Y +  +RPFN AASK KQMLPGGSK  S LQAGYFD +F RI  GEGY +  + RR+D +E  K+NLGKAF PS+  K P G GS+YGT  GPV  FS  +KP++ Y +PG+N  TNP +KGTGYGY N+ IGK  +++++ YD AK   +K N +  R++KGA FKLNLHP+ YFD NPY +++ +PP K+ +K K     F PSSP K+ GG KAG F  YP HS DPY+ K  +  G    +  IF P  GPK+ P  SIM  +V R  N +N++++ +P
Sbjct:    3 AEGGKTDMERIGLFSEMEYITVGDKYVSQFNRPFNEAASKNKQMLPGGSKEMSDLQAGYFDPHFVRIFEGEGYINLNQVRRRDMVEAAKKNLGKAFLPSNGEKKPCGLGSYYGTIGGPVPFFSAQSKPREKYKAPGKNLYTNPGKKGTGYGYANITIGKQFSHSADFYDAAKLKYKKANEEHHRLLKGAPFKLNLHPRDYFDANPYFSEESLPPIKKEEKKKTISNTFKPSSPGKKPGGMKAGTFDPYPSHSADPYVAKLANISGK---DDKIFHPPSGPKSRPVESIMTLNVRRALNSKNYKTSSVP 307

The following BLAST results are available for this feature:

BLAST of TCONS_00011839-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00011839-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CD047	5.950e-102	51.30	UPF0602 protein C4orf47 OS=Homo sapiens GN=C4orf47...	[more]

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TCONS_00011839-protein (polypeptide) - C. hemisphaerica