TCONS_00011839 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011839
Unique NameTCONS_00011839
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2329

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011839 ID=TCONS_00011839|Name=TCONS_00011839|organism=Clytia hemisphaerica|type=transcript|length=2329bp
CCTCACTCACCGTGCGTGCGACCGTTTGAGTACGTCACGTGAACATTTGA
GTATGTTGCGCATGTGGTGCAgccatagaccttttcgcctttccatccgc
catattctGCCGTTTTACAGCCAAAAGAGGGAAGGGGGTTAGGTAATTAA
ACGAGAAGTTAAAAAACAATCTAAGATGGTGGATGCAGCAAATGGGAAGA
ATGATTTGACCAGAATCGGGTTGTTCAGTGAATTAGGATATATCTCAATT
GGTGATCCATACACAAATTCAAATAGCCGCCCTTTCAATGTCGCCGCTtc
taaaggaaaacaaatgCTCCCTGGTGGGAGCAAATCAAAGAGTGCTCTAC
AAGCAGGCTATTTTgataagaattttcaaaggatAATGACCGGTGAAGGT
TATTCAGATCCAGTTAAAAGACGTCGACAAGACAGGCttgaaaaaactaa
acaaaatttaGGCAAAGCGTTTACACCAAGTCATGCAGGCAAAATGCCTT
CAGGAGCTGGCAGTCATTACGGCACATTTACTGGCCCAGTCAAAACATTT
AGTCCTGTCGCAAAACCAAAGAAAGCTTATGCATCACCTGGCAGAAATTT
CATTACAAATCCAAGCCGTAAAGGCACGGGTTATGGCTATGTGAATGTTT
TCATCGGCAAGCCACAAAATTACGCCAGTGAACCTTACGATCGTGCTAAA
GAAATCCGAAGGaaagagaACACAGACAGCAAACGAATGATGAAGGGAGC
ATCTTTCAAATTGAATCTTCATCCAAAAGCATACTTCGATGGCAACCCAT
ACAAGACAGATAAACCGATGCCTCCCTACAAAGAAGGGAAGAAAGATAAG
AAAACAGTCAAACCGTTCATGCCTAGCTCACCAGCTAAAGagATCGGTGG
ATCAAAAGCTGGTTGTTTTACACATTATCCAAAACACTCTGATGATCCTT
ACATCGTTAAGAAGAATTCTTTCCGTGGTAGTGTAGCGGcagagaaaaat
atctttcgaCCATCTCAAGGTCCAAAAACTATGCCAACTAATTCGATTAT
GGCTCAACACGTAGAAAGGCGTTACAATCGACAAAACTTCGAATCAGCGC
CATTGCCACCCATCGCTGCGTCATCATAGCGCCCTTAAAATAGCGCCCAA
ATACACCGAAACTTTATATATTAAtgatttttaattgattttttctagtt
tttgtATATAATGAAATAATTTAATGACTATGGGGATTATTTTTAGAATG
AGCAGGTATGTGTATTTTGTAAAAGAACTCTTTTTATATCTTAAAACTAC
CTTTGAGCTGCTTATATTGTTGGTTGTTACAATTTCCCATTTGGGGGAGG
GGGCTTTGGGCTCGGCTCAACACTGTACTAAATCTTTTTCAACCACTTTA
AAATATCTGtctcaaatcataaaaaaacttcATACTACTGATTCAGTTAG
AATACAGCTAGGCTTTTTATATGTACACATAATCAGggttttttggggaa
aaaagtACTCTAAACATTAACGGTTATAGTCAGGATCATCTTACTCTAGT
AGCTCACTTAACATTTAGACCATGTTCTGACGTCACGGTTCTTCACGGTT
GAATCAAATGTGAACGtcaaaaattcgaaacgtcaaaaaagaagacgtta
cacagTAAAActgatcgaaacggtttcgctccactctTTTCATCGGAATG
GaatgctccgttttcttgctccaaaATGTTCTGAAACTAATATGATCTCG
ATCCATAACGTCTGAACTTGGTCTTAGTTTTCACTTGAATTTCTAAATAT
TACATTACTTTGTATCCCTTTTTAGAAGCGTTATATTCTGTCAAAATATG
ATTTCTACATAATCTacctttaaaaaatcaattttacaattggtttgtcc
taaaaactaaaaattttctcGAATTATTAGAGAAATTATTAACTGATAAA
AATACTCCAGAAATGGTCCGTTGCATTAGCTTatgacaatttttgaactt
tctCATCTGCTTCTTGGTCCGAATATCTGAGCATACATTTGGCTAACATT
AGCCTGTTCATGTATGATCTACATTTATTGCATTCTCTTCTCCCGGCTTG
GAATGTGTTGACACAGGCTAAATAGGTTTTGAAGATTAATCTGTGTGGAA
GATGGGCTAGATTTCCAATGCATGTTGATTTTTGACTGTTCACTTGACGC
ATACATGATTCATAAACCAAGGTTCGGGAACGGTAATTTGCACTTGGTGC
TGCTGTTACTATGGTTATAATAACCAAAATGGTAGACAAGATGTGGAGAT
TCATGATTGATTGGGTGTTTGGTAGCTTG
Run BLAST on NCBI

protein sequence of TCONS_00011839-protein

>TCONS_00011839-protein ID=TCONS_00011839-protein|Name=TCONS_00011839-protein|organism=Clytia hemisphaerica|type=polypeptide|length=317bp
MVDAANGKNDLTRIGLFSELGYISIGDPYTNSNSRPFNVAASKGKQMLPG
GSKSKSALQAGYFDKNFQRIMTGEGYSDPVKRRRQDRLEKTKQNLGKAFT
PSHAGKMPSGAGSHYGTFTGPVKTFSPVAKPKKAYASPGRNFITNPSRKG
TGYGYVNVFIGKPQNYASEPYDRAKEIRRKENTDSKRMMKGASFKLNLHP
KAYFDGNPYKTDKPMPPYKEGKKDKKTVKPFMPSSPAKEIGGSKAGCFTH
YPKHSDDPYIVKKNSFRGSVAAEKNIFRPSQGPKTMPTNSIMAQHVERRY
NRQNFESAPLPPIAASS
Run BLAST on NCBI

transcript from alignment at sc0000133:399669..410982+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011839 ID=TCONS_00011839|Name=TCONS_00011839|organism=Clytia hemisphaerica|type=transcript|length=11314bp|location=Sequence derived from alignment at sc0000133:399669..410982+ (Clytia hemisphaerica)
CCTCACTCACCGTGCGTGCGACCGTTTGAGTACGTCACGTGAACATTTGA
GTATGTTGCGCATGTGGTGCAgccatagaccttttcgcctttccatccgc
catattctGCCGTTTTACAGCCAAAAGAGGTAAgttacattttctttttt
ttcaaaatgttgagtTATTTAAAACGAAACGCGTTTTGGTTAGTTTAAGA
AGATCTAAAAACGCTACaagattctttttgttttttattttgttcaaaat
gaccttaatttttttttcacttaattTGAAATGATTTGCTTAATTCAATC
TTAAAATATTGTGACATATATACCTCCTTTATACAATTTATAGCATTAAA
ATAAGCCTTAGAATTGTAACTTACCTTTTTtaacaaacattttttaacgT
AAAATCGAACATACATCCTTTTACATcatcaaatattattttaatcATCA
TCATACATCTAATTCTTCTGAATATGTAAAGAAAACATGTAACATACCTC
TAATTACCATGTTAAAATCAGCACTTTccaatgaaaatttttgttcaata
tgTCTGTAGCTGGAAAGAGCCTTTGAAAAAATGgggttttgtgaaaaaaa
tttttttttgaaaatttgtaacttACCTCCTTTGGCTGTAAAACGGCAgt
attgaatagaccttttttcaaagaggacgtcctgttgaataattatgtag
tccagccttaaaaacaatgatagagccatgcataattactgtatcatgca
tattgtaataattatgcatggttttatcactgtttttctgctggatacat
aattattcaacagggtggcctctttgaaaaaaggtctattgtatgcaatt
caattcaattcaattcaaaacatatatttacccgAAGGAAGGGACACCAA
GTTTAGAAACCTAATTACAAATGGTGCAACCTAATAAAAAAATGANNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNGCCTATTGGACCTAAAGATGATAAATTCGGTCTTACTAGCGTTAAGCG
ATATTTTGTTAGCATTCAGCCAGCTAACAAGAACTCTGAGGTCAGAGTTC
ACTCTCCCACACAGAGACCAGACAGTTTGAGAGAGATTTAGTAAATGAGT
GTCGTCGGCAAAGTGATAGGTTTCTGAAGTTCTAATACAGTAATGGAGAT
CATTAATGTatacaaaaattatggtggccgaattgccgtggtgaaattac
ctagaaagtatgcaaacatatgcaaaaagaaagtatttaatgtaaaactt
acatgcataattcaATTGGCATTACATTAAAGTATAATCTTGTAGaggaa
agattaaatttgcttcttttgaaaactagaaataatcaaattcactctca
tctcttagaacgagcacttcaaaaaaccataacattagacataaactcaa
gctgaaaaatcacccgtgAAGGACAGAATTATTCCTTATTCGGTTGAGGG
TAAATTATTCTCATGGGAATAGAACCGTcagacgatcaaatcaaaacatt
gatctaaaCTCGCTGGATGTATGATgccataattactgctttcagtttgc
gtgttttgaaagtttgatgtgtgtactccgtctcgGTGGAATtctttaat
ggcatgaaaacagaatatgcaatatctttaagaacaaatttctaaaaggc
ttttgttgttctgtaaatatttctttttggattgagaaatttcatctttt
attgttctaatgattataatatttctttataagatgcttttttGTTGATA
ATTCAAGTCAATAAATAAAGAATTAGACacgaaaatttttatttgaaaat
taagCATAAGCTTTTCGACAAAGTCATCTTCAGTGcaaatgatttaaata
aaacgTTAAAAATGGTGTACAGTTTATacaagaaatgtttttgagaaatc
aCTGCTAATTCCCATGGGCTATGAGTAGATAATAGAATCTACGATAGTTA
TAGAATTAACAATGATTTCTCAAGggtaataaaaacataaaatattaaaa
tgttttgctATAAAATCAATTTATTCCATTTCGAAAAAGTAAAGTTTTTG
TTTCAGTTTGATTGTTCAATGAAGGGGCATTCAAGGCAATTAAAAACGCT
CNGGTTTGATTGTTCAATGAAGGGGCATTCAAGGCAATTAAAAACGCTTC
CAggctctttctttcttttttgttgattGGAGCAGGCGATAGGATTTTCC
ACGTGAAAGCATGATCAGGGTTATTAAGGAGGTGTTTTGAAGGTTCAGAT
GTCCCACTTGATGACGTATGTTCACCCCACCTGACTTCAACATTTTTTCC
CTTTCACCAATATATGTTTCCCCGCATATACAATCTCCTTGGTAGATTTT
TCAAGATGGATGTGGATTTTTGCTTTTCAATTTGAACAAGTTTCTATCTT
TCTTAGTGTTCCATTTTATTGAAACATTATACCGCTTATTTGTAAAGGCT
TGGAATTTTTCTAGGAATTTGGATGATATATTCTTTTCTTTCTGctcatc
aaagaaattttgtggaATGATAACCTCGTCTTCatatttttctgtaaatt
tatccTATATCTGTATACTGACGAAATACACTATCAGTAAATCTTGGTGG
GAAACCAGCTCGTTGAAATTTATCCTTtatcaatttctttttgttttcaa
aattcgaTGATATTTTGGCTGCCCGGTGGATATCTGTGTTGATCGCATTT
CGTTTGTATCGTTTTGGAACTCTCGATATCCAGTGATTAGGTAATTTATA
TTCACTACGATAAGCGGATGTTTCTATCGTTTCATTATATTTGATTTTTG
TGTCCAAGAACTTTGTTGGCGAAACTTCAATAttgtgaatttgatttttt
ccggTTTAAAATTGTTTAATGCTGTGAAAAGTACATctggtttgtttttc
tttcgtCGATTTATAGAGTCGTCGACATATCGGCGATAGAACAAAGGCTT
CAGGGGTACAACAACCTGTTGTTCTAATTTAGTcataaaaatgttagaaa
atacTACGGATAACGGACCTCCCATGGTGCATCCATCGGTTTGTTTGTAG
AATTTTCCGTCAAACatgcttttttgtctttttaatctttgtgtaaactt
gcatatgttttgcatattttccaactaaatccaaccacggctttttcgtt
cctcaatttttgcatacaattcaagatggcggatggaaaggcgaaaatgT
CTATGGTGCAGCACCCACAGCCAGTACAGCACATCACAGTGCCAGTAAGG
GCATATTCCTCTATCTTTGCGTACGTTGTTGCGTCGTGAACAACCACGAA
GAGGTTCGCCCGGGGCactaagtttcaaaataaatgttAAAATTCCCAGA
CATTTAACACGAAATTATAATCCTAATGCATTTTTGAGAGCTTTAGATAT
CCCATTTTGGCgagtttgaattttttagatttttaaccTTTTATAGAAAA
GTTTTCAGATTTATAAACAGTAATTACTGACTTTTTTCttaatttacatt
taaaaactCTTCTTTATATCTGTAATATAATTATGTTTTGCTTACAGTAC
AAAAGTTTTTCAGTTTGCTTGGGCTATTTTGACGTCATCTTGGTAAAGTC
AGGTATATAATTTATAGAAAAAACGAGTCAAAAAAGGATTAGAAGAAGTC
TTCaggatttttaaagaaaagtgtaatgatgaaattattttttgctgGAC
GTTGTCATCCTTTAACTCAGCCATTTTGGGATTTGTGATCCTTGTAAGCT
GCAAGGTTGCAACAGTTCACTCCTAGGCCCGGTTGTTTGAAAGTGGATTA
GCGGCCAATTAGCGTAATTTTCGATTAAATCTCGATTAGCGCCGATTAGC
ACAGAACCGTTggttgtttgaaaaaaattaggcttaaaaatctaattaaa
tTCCGATTAAATCAGGCAAATTTTAATCCTGCTCTGACCCAGGATTAACG
AGGATTAAGAAGCTTTTTCCTACAAAATAAGTGAAGTCGCTGAAGTGAGA
AATTggaacaaaaaaagattttcgaatgttttgagaaCATTCGAAAAGTG
ACGTCAAGATTAAGTTTTTTTGAATACACAGGCAAAATGTCCATAATTAG
TTAATCTGACGTTCGAACAACGTAAGTTAATCGCCGGGATTAATTAATCG
AAATCTAATGGCGATTAGCGCTAGTCGGGATTTAATCGAAtcgacttttg
aacaaccgggtcCTGGAGTCAACCAATCAACCACGTTTTTCAATCAAACA
CGTTTTTAAAAGaacgtccaaaatttttgaatggatgttaattcttttta
gttttaagcctaaagatgttcttaagattttcttatGCTTTATCTGAGTA
TTTTTTCTCAATTCCATAAGAAATTGGGGTTTTTGAGTCCTTTAAAAGca
atcaaatgttttgattttccaataAGGGTTAATTAACGAATCTCTGTATG
ACCATCtgcaaaaaagaacaaaatgatataatttttatttacagGGAAGG
GGGTTAGGTAATTAAACGAGAAGTTAAAAAACAATCTAAGATGGTGGATG
CAGCAAATGGGAAGAATGATTTGACCAGAATCGGGTTGTTCAGTGAATTA
GGATATATCTCAATTGGTGATCCATACACAAATTCAAATAGCCGTAAGTT
ATTATTATTTCAGGTGTTTCAATAGATTTATAGGATTTTCTTTTTCGATA
ATCGTATATATCATTTTTAAGGGACATTAGAACCTTGAAATTGGCTTGAG
AACCTGTTTCTAAGCTAAGATCAGAGGCTCCCAAGcagttttcgtgatgg
cgtgataggGACCTTTTTCATgagtgattacgtgatttggagattttctt
cgtGATTGTGCGAGAGGTCAAAGCTGGTCAAAGCGGGATTgtcatttgaa
agattttgatttggactttttcaaagggatgcataatccattttttttgc
tgattttcgcgatcgtgattgaagacacaAAATTGGCGCGATATCGTTCC
TTGCGATTCTTGTAAAAAGATTAATATAAAAGTACTATGAATTATATATT
AGATCATAAATTTAGAGTTTTGATCTGTTCTTTCATTCATTTTCTCAGGC
CCTTTCAATGTCGCCGCTtctaaaggaaaacaaatgCTCCCTGGTGGGAG
CAAATCAAAGAGTGCTCTACAAGCAGGCTATTTTgataagaattttcaaa
ggatAATGACCGGTGAAGGTTATTCAGATCCAGTTAAAAGACGTCGACAA
GACAGGCttgaaaaaactaaacaaaatttaGGCAAAGCGTTTACACCAAG
TCATGCAGGCAAAATGCCGTAAGTTTTGTATTTCATCTTTTCATAGTtgt
gccattttgaaaatattcattaTGTCCATGGAACCCTTACCTTTCTGCCA
AAAAAGgctatttttaaaactttcagtTATTTTTCACcatgaattatttt
caaattgactCGAAGTGGGTCTTAAAAATAGCACAAACtccttaaaatgc
aaaaattttggACAACGTCAATACACTCCAATATTTGCTCCTTCACTTCA
GCCCTCAAGCTGGGGGCCCTTGTAACAAGTATCAAAATAGCTTAATTTTT
AGCGTTCctttaaaaaagtgtttttttcctTATTTCGTCTAAACATAGAA
ATACATGGTTTTACCATTGACCACTCAAAGCTGGAAAAATTATTCTTATC
TTGGAGATTATTTATTGGTCATTATTTTAACTTCGAATTTTAGCTACACA
ACTCCATCTTGTTTATATAACAGGTGAACATAAAAAACACAGTTGTGTAT
GCTTTATATAATATATAGGTTAACGACATTTTGTACATTGATTAGTAATT
TTGTAAATCAATTTTTAGTTCAGGAGCTGGCAGTCATTACGGCACATTTA
CTGGCCCAGTCAAAACATTTAGTCCTGTCGCAAAACCAAAGAAAGCTTAT
GCATCACCTGGCAGAAATTTCATTACAAATCCAAGCCGTAAAGGCACGGG
TTATGGCTATGTGAATGTTTTCATCGGCAAGCCACAAAATTACGCCAGTG
AACCTTACGATCGTGCTAAAGAAATCCGAAGGGTTTGTATTAgcttattt
ttccattttctttcttcttttcttttctggCGAAAATCCGTATAAAGGGT
ATTCAAAAACATCACATTTCAACGAGGTAATTTTTAGTATGCTATAAAAA
TTTCCCTTCTATAGGCGTTTACTTTCAGATGCCTAATGTACAGGGGGGGC
TAGTTGTCAAGGTCGGAAATTGAACTTCTAATACCCCTAAACTAAGTTAA
TTATAGACTAAAACAGGATATTTTGGCAGCTGAAANAAATTTACTTTCAG
ATGCCTAATgtacaggggggggggctagtTGTCAAGGTCGGAGATTGAAC
TTCTAATACCCCTAAACTAAGTTAATTATAGACTAAAACAGGATATTTTg
gtagctgaaaatattttcaaaatatcaataaaCGATGCGGGGTCCTAATA
ACACCGGGCGttggaaaaattccaaaattgaaaagcaggggggggggctt
aagAGTAATTTTGATTGGAATTCAAAGGCAATGCATCATTTACTGTTTGA
ATTTTGAGATAAACTTCAagtttttggtcaatttttagaaagagaACACA
GACAGCAAACGAATGATGAAGGGAGCATCTTTCAAATTGAATCTTCATCC
AAAAGCATACTTCGATGGCAACCCATACAAGACAGATAAACGTAAGAAAA
TAAGctacttttttatgaaatatatctTTATCTGCTGCTTAAGTGTTAAG
AGGAGTATCCACTGAAATCTTTTTAACATCCCTGTCTCTTTCCCACAGGG
ATAAcaatttctatcgaaattccAATGAGAATGGAAATTATACTGTTCCT
AGCtcaaaaaatctttaagttaactttccagtgggtctgGAATTGTTGGA
ACAGGCTTCAGACCTTCATAAACTGATCCCCAAAACAAGAACATAAATTT
ATGAATTATCATTTGTCAGGTTTGTCTCCATTTAATGGACTAGATTTTTA
AAGTATGGCaattgttttgttgatttttaaaaatatcatgTATTATCTGA
AATTGTTATCGGATCAAGTTCTTCTTACTGTGGGATGGCTAAATTTTGAC
AACAGTCTTAAGACGACAGACAGCCGAACAAGTTGAAGTTACTTTTGTAC
CTACCCAGAGTGTTGGTATTTTTTTGTTATGAAGTGGCAATAGGAAGGTT
TTCGAAAGTTTAGGTATGTGAAGTGAATTATTtgatcaatttttattttg
cagCGATGCCTCCCTACAAAGAAGGGAAGAAAGATAAGAAAACAGTCAAA
CCGTTCATGCCTAGCTCACCAGCTAAAGaggtaaacatttttttaagttt
tcacAAGCTTCTCAGTCAAAATTATCACAGTCTTCAATGGGCTCTTTGAC
CGTCTATAAAGTCTTCAGCGATTTCACTGAAATCTTCCAAATCATCTTGC
TCGGCAAGAAGTCTTGTCTCGCGTACCCTCTGAGCGGTAAGGTTACAGTT
AACGCTTTCTAATTAAACTAAACCCCTGCAGCTCGAAttattctctaatt
cgaagaagatTCATTGTCCCTTGAAAATCTTATTAGTGAGAGTCAACTGT
GTTAACACAAGGcccgggggtacttaggcaaaaatggatgatgggtatgt
gcggacggtaagggtcgttTTCTCACGATTCAAAGGGTCGGAGAATTCGG
GATTTTTagggattttttttatttccacagaaaaaattgtaataaagtct
ctctaagggtatgacttttttcaaaaatcgaaaagaaaatttcaaaaagt
ctctctaagggtcaccttttcagcaaaaatcagtctctcacTTGACGCTC
TCAAATTCAGTTCTTAAGGGGATTTAGATTTTAAAGGaagtgtatcgaat
agtagagcgtcgtttttgaaatatctgttgACGtttactttcaatattat
caaataattgAGCGTTATCAAATAATAGAAAGTCGAATTAGGGAGGGTCA
ACTGTATCTTAAAAAACCATTTTCGCCATTAGATCGGTGGATCAAAAGCT
GGTTGTTTTACACATTATCCAAAACACTCTGATGATCCTTACATCGTTAA
GAAGAATTCTTTCCGTGGTAGTGTAGCGGcagagaaaaatatctttcgaC
CATCTCAAGGTCCAAAAACTATGCCAACTAATTCGATTATGGCTCAACAC
GTAGAAAGGTATGTTCCGCTTTCATTAAAGTCCACTCAAATATACATCTA
TCAACACAATAgagagattatgtatcggagatattctacggctaagGTTG
CGGGCTCCCCATACGTGGGTCGTCACCAAATGCGACATGTcattgtctac
tttgctctgtacgggaaaaacaccaaaacaccatataagcaaagtcgaca
taatgccgtacgtcaaaaatcgaacttgctttcacccgccatttcCCTTG
CCGCtttaaccgtagccgtagagaattccagatacataatctcgctaata
gCGACGTTGTCGGCTTTTAAGGGGTTCAGTCACTGACCTTCgcatatccc
tggaccaagttatatCCGCCATcgttgattggagtttttttggtattggt
acccgagaagaagccattgcgatgttaaaattaacgtctaacggcgctac
atcaacaaaaaaaatttgagggaaagtaaacctagcgctctcgatgcatt
tacaccgctattgagtagtgccgccacctttctaaaaactccgatcaaag
attttgctttgcaGTTTGCCGGGATTGAGacacttggtccagggtatata
aaggtcagtgaattcggtaatgaatttacaaggaaatgACGTCAAGATTC
TTTGTCTTTGAAAAAGTTAATTCAACGACTTCAGTTATTTTGACGCCATT
CTTTGTTGGTAAACTCGAACCGAGTCTCCCCACGCTTTAAAGGTTGATAG
GTGTACAGTATtctaattctattgtttttggCTCAGCAAGTTCTTTTTAG
CTCGTCAACCCTCTCCAGCTAACAGGAACTTCTTAAAAATCAACAGTATT
CAACAGCAGTTACTCAGAAGTTTTGTAGAAATTGATAACAAAAGAAGGAT
TCGCTTTCTCTCTGTCCTTTCATAGCCGTTGTGTTAGTTGTTGAAAGTCA
TACACAGCAAGTAAGAAAGTCGTgtcattttttgtcttttttgtaaCCAT
TAAGTGTAGACTCGATATTAATTGGAAAACtggggaaaagtttttttaag
aatacattcaaaaatctgatttttcaGGCGTTACAATCGACAAAACTTCG
AATCAGCGCCATTGCCACCCATCGCTGCGTCATCATAGCGCCCTTAAAAT
AGCGCCCAAATACACCGAAACTTTATATATTAAtgatttttaattgattt
tttctagtttttgtATATAATGAAATAATTTAATGACTATGGGGATTATT
TTTAGAATGAGCAGGTATGTGTATTTTGTAAAAGAACTCTTTTTATATCT
TAAAACTACCTTTGAGCTGCTTATATTGTTGGTTGTTACAATTTCCCATT
TGGGGGAGGGGGCTTTGGGCTCGGCTCAACACTGTACTAAATCTTTTTCA
ACCACTTTAAAATATCTGtctcaaatcataaaaaaacttcATACTACTGA
TTCAGTTAGAATACAGCTAGGCTTTTTATATGTACACATAATCAGggttt
tttggggaaaaaagtACTCTAAACATTAACGGTTATAGTCAGGATCATCT
TACTCTAGTAGCTCACTTAACATTTAGACCATGTTCTGACGTCACGGTTC
TTCACGGTTGAATCAAATGTGAACGtcaaaaattcgaaacgtcaaaaaag
aagacgttacacagTAAAActgatcgaaacggtttcgctccactctTTTC
ATCGGAATGGaatgctccgttttcttgctccaaaATGTTCTGAAACTAAT
ATGATCTCGATCCATAACGTCTGAACTTGGTCTTAGTTTTCACTTGAATT
TCTAAATATTACATTACTTTGTATCCCTTTTTAGAAGCGTTATATTCTGT
CAAAATATGATTTCTACATAATCTacctttaaaaaatcaattttacaatt
ggtttgtcctaaaaactaaaaattttctcGAATTATTAGAGAAATTATTA
ACTGATAAAAATACTCCAGAAATGGTCCGTTGCATTAGCTTatgacaatt
tttgaactttctCATCTGCTTCTTGGTCCGAATATCTGAGCATACATTTG
GCTAACATTAGCCTGTTCATGTATGATCTACATTTGTTGCATTCTCTTCT
CCCGGCTTGAAATGTGTTGACACAGGCTANACATTAGCCTGTTCATGTAT
GATCTACATTTATTGCATTCTCTTCTCCCGGCTTGGAATGTGTTGACACA
GGCTAAATAGGTTTTGAAGATTAATCTGTGTGGAAGATGGGCTAGATTTC
CAATGCATGTTGATTTTTGACTGTTCACTTGACGCATACATGATTCATAA
ACCAAGGTTCGGGAACGGTAATTTGCACTTGGTGCTGCTGTTACTATGGT
TATAATAACCAAAATGGTAGACAAGATGTGGAGATTCATGATTGATTGGG
TGTTTGGTAGCTTG

Coding sequence (CDS) from alignment at sc0000133:399669..410982+

>TCONS_00011839 ID=TCONS_00011839|Name=TCONS_00011839|organism=Clytia hemisphaerica|type=CDS|length=6678bp|location=Sequence derived from alignment at sc0000133:399669..410982+ (Clytia hemisphaerica)
ATGGTGGATGCAGCAAATGGGAAGAATGATTTGACCAGAATCGGGTTGTT
CAGTGAATTAGGATATATCTCAATTGGTGATCCATACACAAATTCAAATA
GCCGCCCTTTCAATGTCGCCGCTtctaaaggaaaacaaatgCTCCCTGGT
GGGAGCAAATCAAAGAGTGCTCTACAAGCAGGCTATTTTgataagaattt
tcaaaggatAATGACCGGTGAAGGTTATTCAGATCCAGTTAAAAGACGTC
GACAAGACAGGCttgaaaaaactaaacaaaatttaGGCAAAGCGTTTACA
CCAAGTCATGCAGGCAAAATGCCTTCAGGAGCTGGCAGTCATTACGGCAC
ATTTACTGGCCCAGTCAAAACATTTAGTCCTGTCGCAAAACCAAAGAAAG
CTTATGCATCACCTGGCAGAAATTTCATTACAAATCCAAGCCGTAAAGGC
ACGGGTTATGGCTATGTGAATGTTTTCATCGGCAAGCCACAAAATTACGC
CAGTGAACCTTACGATCGTGCTAAAGAAATCCGAAGGaaagagaACACAG
ACAGCAAACGAATGATGAAGGGAGCATCTTTCAAATTGAATCTTCATCCA
AAAGCATACTTCGATGGCAACCCATACAAGACAGATAAACCGATGCCTCC
CTACAAAGAAGGGAAGAAAGATAAGAAAACAGTCAAACCGTTCATGCCTA
GCTCACCAGCTAAAGagATCGGTGGATCAAAAGCTGGTTGTTTTACACAT
TATCCAAAACACTCTGATGATCCTTACATCGTTAAGAAGAATTCTTTCCG
TGGTAGTGTAGCGGcagagaaaaatatctttcgaCCATCTCAAGGTCCAA
AAACTATGCCAACTAATTCGATTATGGCTCAACACGTAGAAAGGCGTTAC
AATCGACAAAACTTCGAATCAGCGCCATTGCCACCCATCGCTGCGTCATC
ATAGATGGTGGATGCAGCAAATGGGAAGAATGATTTGACCAGAATCGGGT
TGTTCAGTGAATTAGGATATATCTCAATTGGTGATCCATACACAAATTCA
AATAGCCGCCCTTTCAATGTCGCCGCTtctaaaggaaaacaaatgCTCCC
TGGTGGGAGCAAATCAAAGAGTGCTCTACAAGCAGGCTATTTTgataaga
attttcaaaggatAATGACCGGTGAAGGTTATTCAGATCCAGTTAAAAGA
CGTCGACAAGACAGGCttgaaaaaactaaacaaaatttaGGCAAAGCGTT
TACACCAAGTCATGCAGGCAAAATGCCTTCAGGAGCTGGCAGTCATTACG
GCACATTTACTGGCCCAGTCAAAACATTTAGTCCTGTCGCAAAACCAAAG
AAAGCTTATGCATCACCTGGCAGAAATTTCATTACAAATCCAAGCCGTAA
AGGCACGGGTTATGGCTATGTGAATGTTTTCATCGGCAAGCCACAAAATT
ACGCCAGTGAACCTTACGATCGTGCTAAAGAAATCCGAAGGaaagagaAC
ACAGACAGCAAACGAATGATGAAGGGAGCATCTTTCAAATTGAATCTTCA
TCCAAAAGCATACTTCGATGGCAACCCATACAAGACAGATAAACCGATGC
CTCCCTACAAAGAAGGGAAGAAAGATAAGAAAACAGTCAAACCGTTCATG
CCTAGCTCACCAGCTAAAGagATCGGTGGATCAAAAGCTGGTTGTTTTAC
ACATTATCCAAAACACTCTGATGATCCTTACATCGTTAAGAAGAATTCTT
TCCGTGGTAGTGTAGCGGcagagaaaaatatctttcgaCCATCTCAAGGT
CCAAAAACTATGCCAACTAATTCGATTATGGCTCAACACGTAGAAAGGCG
TTACAATCGACAAAACTTCGAATCAGCGCCATTGCCACCCATCGCTGCGT
CATCATAGATGGTGGATGCAGCAAATGGGAAGAATGATTTGACCAGAATC
GGGTTGTTCAGTGAATTAGGATATATCTCAATTGGTGATCCATACACAAA
TTCAAATAGCCGCCCTTTCAATGTCGCCGCTtctaaaggaaaacaaatgC
TCCCTGGTGGGAGCAAATCAAAGAGTGCTCTACAAGCAGGCTATTTTgat
aagaattttcaaaggatAATGACCGGTGAAGGTTATTCAGATCCAGTTAA
AAGACGTCGACAAGACAGGCttgaaaaaactaaacaaaatttaGGCAAAG
CGTTTACACCAAGTCATGCAGGCAAAATGCCTTCAGGAGCTGGCAGTCAT
TACGGCACATTTACTGGCCCAGTCAAAACATTTAGTCCTGTCGCAAAACC
AAAGAAAGCTTATGCATCACCTGGCAGAAATTTCATTACAAATCCAAGCC
GTAAAGGCACGGGTTATGGCTATGTGAATGTTTTCATCGGCAAGCCACAA
AATTACGCCAGTGAACCTTACGATCGTGCTAAAGAAATCCGAAGGaaaga
gaACACAGACAGCAAACGAATGATGAAGGGAGCATCTTTCAAATTGAATC
TTCATCCAAAAGCATACTTCGATGGCAACCCATACAAGACAGATAAACCG
ATGCCTCCCTACAAAGAAGGGAAGAAAGATAAGAAAACAGTCAAACCGTT
CATGCCTAGCTCACCAGCTAAAGagATCGGTGGATCAAAAGCTGGTTGTT
TTACACATTATCCAAAACACTCTGATGATCCTTACATCGTTAAGAAGAAT
TCTTTCCGTGGTAGTGTAGCGGcagagaaaaatatctttcgaCCATCTCA
AGGTCCAAAAACTATGCCAACTAATTCGATTATGGCTCAACACGTAGAAA
GGCGTTACAATCGACAAAACTTCGAATCAGCGCCATTGCCACCCATCGCT
GCGTCATCATAGATGGTGGATGCAGCAAATGGGAAGAATGATTTGACCAG
AATCGGGTTGTTCAGTGAATTAGGATATATCTCAATTGGTGATCCATACA
CAAATTCAAATAGCCGCCCTTTCAATGTCGCCGCTtctaaaggaaaacaa
atgCTCCCTGGTGGGAGCAAATCAAAGAGTGCTCTACAAGCAGGCTATTT
TgataagaattttcaaaggatAATGACCGGTGAAGGTTATTCAGATCCAG
TTAAAAGACGTCGACAAGACAGGCttgaaaaaactaaacaaaatttaGGC
AAAGCGTTTACACCAAGTCATGCAGGCAAAATGCCTTCAGGAGCTGGCAG
TCATTACGGCACATTTACTGGCCCAGTCAAAACATTTAGTCCTGTCGCAA
AACCAAAGAAAGCTTATGCATCACCTGGCAGAAATTTCATTACAAATCCA
AGCCGTAAAGGCACGGGTTATGGCTATGTGAATGTTTTCATCGGCAAGCC
ACAAAATTACGCCAGTGAACCTTACGATCGTGCTAAAGAAATCCGAAGGa
aagagaACACAGACAGCAAACGAATGATGAAGGGAGCATCTTTCAAATTG
AATCTTCATCCAAAAGCATACTTCGATGGCAACCCATACAAGACAGATAA
ACCGATGCCTCCCTACAAAGAAGGGAAGAAAGATAAGAAAACAGTCAAAC
CGTTCATGCCTAGCTCACCAGCTAAAGagATCGGTGGATCAAAAGCTGGT
TGTTTTACACATTATCCAAAACACTCTGATGATCCTTACATCGTTAAGAA
GAATTCTTTCCGTGGTAGTGTAGCGGcagagaaaaatatctttcgaCCAT
CTCAAGGTCCAAAAACTATGCCAACTAATTCGATTATGGCTCAACACGTA
GAAAGGCGTTACAATCGACAAAACTTCGAATCAGCGCCATTGCCACCCAT
CGCTGCGTCATCATAGATGGTGGATGCAGCAAATGGGAAGAATGATTTGA
CCAGAATCGGGTTGTTCAGTGAATTAGGATATATCTCAATTGGTGATCCA
TACACAAATTCAAATAGCCGCCCTTTCAATGTCGCCGCTtctaaaggaaa
acaaatgCTCCCTGGTGGGAGCAAATCAAAGAGTGCTCTACAAGCAGGCT
ATTTTgataagaattttcaaaggatAATGACCGGTGAAGGTTATTCAGAT
CCAGTTAAAAGACGTCGACAAGACAGGCttgaaaaaactaaacaaaattt
aGGCAAAGCGTTTACACCAAGTCATGCAGGCAAAATGCCTTCAGGAGCTG
GCAGTCATTACGGCACATTTACTGGCCCAGTCAAAACATTTAGTCCTGTC
GCAAAACCAAAGAAAGCTTATGCATCACCTGGCAGAAATTTCATTACAAA
TCCAAGCCGTAAAGGCACGGGTTATGGCTATGTGAATGTTTTCATCGGCA
AGCCACAAAATTACGCCAGTGAACCTTACGATCGTGCTAAAGAAATCCGA
AGGaaagagaACACAGACAGCAAACGAATGATGAAGGGAGCATCTTTCAA
ATTGAATCTTCATCCAAAAGCATACTTCGATGGCAACCCATACAAGACAG
ATAAACCGATGCCTCCCTACAAAGAAGGGAAGAAAGATAAGAAAACAGTC
AAACCGTTCATGCCTAGCTCACCAGCTAAAGagATCGGTGGATCAAAAGC
TGGTTGTTTTACACATTATCCAAAACACTCTGATGATCCTTACATCGTTA
AGAAGAATTCTTTCCGTGGTAGTGTAGCGGcagagaaaaatatctttcga
CCATCTCAAGGTCCAAAAACTATGCCAACTAATTCGATTATGGCTCAACA
CGTAGAAAGGCGTTACAATCGACAAAACTTCGAATCAGCGCCATTGCCAC
CCATCGCTGCGTCATCATAGATGGTGGATGCAGCAAATGGGAAGAATGAT
TTGACCAGAATCGGGTTGTTCAGTGAATTAGGATATATCTCAATTGGTGA
TCCATACACAAATTCAAATAGCCGCCCTTTCAATGTCGCCGCTtctaaag
gaaaacaaatgCTCCCTGGTGGGAGCAAATCAAAGAGTGCTCTACAAGCA
GGCTATTTTgataagaattttcaaaggatAATGACCGGTGAAGGTTATTC
AGATCCAGTTAAAAGACGTCGACAAGACAGGCttgaaaaaactaaacaaa
atttaGGCAAAGCGTTTACACCAAGTCATGCAGGCAAAATGCCTTCAGGA
GCTGGCAGTCATTACGGCACATTTACTGGCCCAGTCAAAACATTTAGTCC
TGTCGCAAAACCAAAGAAAGCTTATGCATCACCTGGCAGAAATTTCATTA
CAAATCCAAGCCGTAAAGGCACGGGTTATGGCTATGTGAATGTTTTCATC
GGCAAGCCACAAAATTACGCCAGTGAACCTTACGATCGTGCTAAAGAAAT
CCGAAGGaaagagaACACAGACAGCAAACGAATGATGAAGGGAGCATCTT
TCAAATTGAATCTTCATCCAAAAGCATACTTCGATGGCAACCCATACAAG
ACAGATAAACCGATGCCTCCCTACAAAGAAGGGAAGAAAGATAAGAAAAC
AGTCAAACCGTTCATGCCTAGCTCACCAGCTAAAGagATCGGTGGATCAA
AAGCTGGTTGTTTTACACATTATCCAAAACACTCTGATGATCCTTACATC
GTTAAGAAGAATTCTTTCCGTGGTAGTGTAGCGGcagagaaaaatatctt
tcgaCCATCTCAAGGTCCAAAAACTATGCCAACTAATTCGATTATGGCTC
AACACGTAGAAAGGCGTTACAATCGACAAAACTTCGAATCAGCGCCATTG
CCACCCATCGCTGCGTCATCATAGATGGTGGATGCAGCAAATGGGAAGAA
TGATTTGACCAGAATCGGGTTGTTCAGTGAATTAGGATATATCTCAATTG
GTGATCCATACACAAATTCAAATAGCCGCCCTTTCAATGTCGCCGCTtct
aaaggaaaacaaatgCTCCCTGGTGGGAGCAAATCAAAGAGTGCTCTACA
AGCAGGCTATTTTgataagaattttcaaaggatAATGACCGGTGAAGGTT
ATTCAGATCCAGTTAAAAGACGTCGACAAGACAGGCttgaaaaaactaaa
caaaatttaGGCAAAGCGTTTACACCAAGTCATGCAGGCAAAATGCCTTC
AGGAGCTGGCAGTCATTACGGCACATTTACTGGCCCAGTCAAAACATTTA
GTCCTGTCGCAAAACCAAAGAAAGCTTATGCATCACCTGGCAGAAATTTC
ATTACAAATCCAAGCCGTAAAGGCACGGGTTATGGCTATGTGAATGTTTT
CATCGGCAAGCCACAAAATTACGCCAGTGAACCTTACGATCGTGCTAAAG
AAATCCGAAGGaaagagaACACAGACAGCAAACGAATGATGAAGGGAGCA
TCTTTCAAATTGAATCTTCATCCAAAAGCATACTTCGATGGCAACCCATA
CAAGACAGATAAACCGATGCCTCCCTACAAAGAAGGGAAGAAAGATAAGA
AAACAGTCAAACCGTTCATGCCTAGCTCACCAGCTAAAGagATCGGTGGA
TCAAAAGCTGGTTGTTTTACACATTATCCAAAACACTCTGATGATCCTTA
CATCGTTAAGAAGAATTCTTTCCGTGGTAGTGTAGCGGcagagaaaaata
tctttcgaCCATCTCAAGGTCCAAAAACTATGCCAACTAATTCGATTATG
GCTCAACACGTAGAAAGGCGTTACAATCGACAAAACTTCGAATCAGCGCC
ATTGCCACCCATCGCTGCGTCATCATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006651XLOC_006651Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011839-proteinTCONS_00011839-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011839-exon-sc0000133-1491911889:399669..399797TCONS_00011839-exon-sc0000133-1491911889:399669..399797Clytia hemisphaericaexon
TCONS_00011839-exon-sc0000133-1510915933:399669..399797TCONS_00011839-exon-sc0000133-1510915933:399669..399797Clytia hemisphaericaexon
TCONS_00011839-exon-sc0000133-1575043694:399669..399797TCONS_00011839-exon-sc0000133-1575043694:399669..399797Clytia hemisphaericaexon
TCONS_00011839-exon-sc0000133-1491911889:404813..404961TCONS_00011839-exon-sc0000133-1491911889:404813..404961Clytia hemisphaericaexon
TCONS_00011839-exon-sc0000133-1510915933:404813..404961TCONS_00011839-exon-sc0000133-1510915933:404813..404961Clytia hemisphaericaexon
TCONS_00011839-exon-sc0000133-1575043694:404813..404961TCONS_00011839-exon-sc0000133-1575043694:404813..404961Clytia hemisphaericaexon
TCONS_00011839-exon-sc0000133-1491911889:405417..405636TCONS_00011839-exon-sc0000133-1491911889:405417..405636Clytia hemisphaericaexon
TCONS_00011839-exon-sc0000133-1510915933:405417..405636TCONS_00011839-exon-sc0000133-1510915933:405417..405636Clytia hemisphaericaexon
TCONS_00011839-exon-sc0000133-1575043694:405417..405636TCONS_00011839-exon-sc0000133-1575043694:405417..405636Clytia hemisphaericaexon
TCONS_00011839-exon-sc0000133-1491911889:406187..406400TCONS_00011839-exon-sc0000133-1491911889:406187..406400Clytia hemisphaericaexon
TCONS_00011839-exon-sc0000133-1510915933:406187..406400TCONS_00011839-exon-sc0000133-1510915933:406187..406400Clytia hemisphaericaexon
TCONS_00011839-exon-sc0000133-1575043694:406187..406400TCONS_00011839-exon-sc0000133-1575043694:406187..406400Clytia hemisphaericaexon
TCONS_00011839-exon-sc0000133-1491911889:406957..407059TCONS_00011839-exon-sc0000133-1491911889:406957..407059Clytia hemisphaericaexon
TCONS_00011839-exon-sc0000133-1510915933:406957..407059TCONS_00011839-exon-sc0000133-1510915933:406957..407059Clytia hemisphaericaexon
TCONS_00011839-exon-sc0000133-1575043694:406957..407059TCONS_00011839-exon-sc0000133-1575043694:406957..407059Clytia hemisphaericaexon
TCONS_00011839-exon-sc0000133-1491911889:407622..407698TCONS_00011839-exon-sc0000133-1491911889:407622..407698Clytia hemisphaericaexon
TCONS_00011839-exon-sc0000133-1510915933:407622..407698TCONS_00011839-exon-sc0000133-1510915933:407622..407698Clytia hemisphaericaexon
TCONS_00011839-exon-sc0000133-1575043694:407622..407698TCONS_00011839-exon-sc0000133-1575043694:407622..407698Clytia hemisphaericaexon
TCONS_00011839-exon-sc0000133-1491911889:408401..408576TCONS_00011839-exon-sc0000133-1491911889:408401..408576Clytia hemisphaericaexon
TCONS_00011839-exon-sc0000133-1510915933:408401..408576TCONS_00011839-exon-sc0000133-1510915933:408401..408576Clytia hemisphaericaexon
TCONS_00011839-exon-sc0000133-1575043694:408401..408576TCONS_00011839-exon-sc0000133-1575043694:408401..408576Clytia hemisphaericaexon
TCONS_00011839-exon-sc0000133-1491911889:409646..410624TCONS_00011839-exon-sc0000133-1491911889:409646..410624Clytia hemisphaericaexon
TCONS_00011839-exon-sc0000133-1510915933:409646..410624TCONS_00011839-exon-sc0000133-1510915933:409646..410624Clytia hemisphaericaexon
TCONS_00011839-exon-sc0000133-1575043694:409646..410624TCONS_00011839-exon-sc0000133-1575043694:409646..410624Clytia hemisphaericaexon
TCONS_00011839-exon-sc0000133-1491911889:410701..410982TCONS_00011839-exon-sc0000133-1491911889:410701..410982Clytia hemisphaericaexon
TCONS_00011839-exon-sc0000133-1510915933:410701..410982TCONS_00011839-exon-sc0000133-1510915933:410701..410982Clytia hemisphaericaexon
TCONS_00011839-exon-sc0000133-1575043694:410701..410982TCONS_00011839-exon-sc0000133-1575043694:410701..410982Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000133supercontigsc0000133:399669..410982 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
13.0364	11.8437	8.94139	8.60147	185.823	143.626	77.1237	78.2763	42.687	50.7188	37.7748	40.215	4.35284	4.76502	4.31416	6.808	7.7435	9.40817	8.24497	8.01978	10.402	8.86446	11.037	11.2291	82.0031	51.141	22.8185	22.9445	5.20734	5.65836
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR029358DUF4586
Blast
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BLAST of TCONS_00011839 vs. Swiss-Prot (Human)
Match: CD047 (UPF0602 protein C4orf47 OS=Homo sapiens GN=C4orf47 PE=2 SV=1)

HSP 1 Score: 298.13 bits (762), Expect = 1.647e-93
Identity = 157/303 (51.82%), Postives = 203/303 (67.00%), Query Frame = 2 
Query:  185 AANGKNDLTRIGLFSELGYISIGDPYTNSNSRPFNVAASKGKQMLPGGSKSKSALQAGYFDKNFQRIMTGEGYSDPVKRRRQDRLEKTKQNLGKAFTPSHAGKMPSGAGSHYGTFTGPVKTFSPVAKPKKAYASPGRNFITNPSRKGTGYGYVNVFIGKPQNYASEPYDRAKEIRRKENTDSKRMMKGASFKLNLHPKAYFDGNPYKTDKPMPPYKEGKKDKKTVKPFMPSSPAKEIGGSKAGCFTHYPKHSDDPYIVKKNSFRGSVAAEKNIFRPSQGPKTMPTNSIMAQHVERRYNRQNFE 1093
            A  GK D+ RIGLFSE+ YI++GD Y +  +RPFN AASK KQMLPGGSK  S LQAGYFD +F RI  GEGY +  + RR+D +E  K+NLGKAF PS+  K P G GS+YGT  GPV  FS  +KP++ Y +PG+N  TNP +KGTGYGY N+ IGK  +++++ YD AK   +K N +  R++KGA FKLNLHP+ YFD NPY +++ +PP K+ +K K     F PSSP K+ GG KAG F  YP HS DPY+ K  +  G    +  IF P  GPK+ P  SIM  +V R  N +N++
Sbjct:    3 AEGGKTDMERIGLFSEMEYITVGDKYVSQFNRPFNEAASKNKQMLPGGSKEMSDLQAGYFDPHFVRIFEGEGYINLNQVRRRDMVEAAKKNLGKAFLPSNGEKKPCGLGSYYGTIGGPVPFFSAQSKPREKYKAPGKNLYTNPGKKGTGYGYANITIGKQFSHSADFYDAAKLKYKKANEEHHRLLKGAPFKLNLHPRDYFDANPYFSEESLPPIKKEEKKKTISNTFKPSSPGKKPGGMKAGTFDPYPSHSADPYVAKLANISGK---DDKIFHPPSGPKSRPVESIMTLNVRRALNSKNYK 302
The following BLAST results are available for this feature:
BLAST of TCONS_00011839 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CD0471.647e-9351.82UPF0602 protein C4orf47 OS=Homo sapiens GN=C4orf47... [more]
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