TCONS_00011983-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00011983-protein
Unique NameTCONS_00011983-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length475

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00011983-protein ID=TCONS_00011983-protein|Name=TCONS_00011983-protein|organism=Clytia hemisphaerica|type=polypeptide|length=475bp
MPINELPDSILLQIFKKCDSKTGLWKARSVCKRWYVILADSELWQTCDLS
QFNLNDACILQTILNYMPVKRFKSIKIKQNTIERNILKSLLKHARSLNSL
TLRHCRITTRDNSSSNHIRDIRSHDAQATNQILEIPCDLKHIDLRKTTGD
TELLVDLITKYGAQIKTFGVTYNLSKYFENDRSLFDFLPNIHALDLTEGL
WVNDEVIREIAKSCPSLRYVGLSKCQNIRGASMEFLMRRCTNIQTLLLSR
TGVRNEELQRVRWENLPLTELDISNCYYLDDTALHRIIKTLAPQLTYLKC
IMTNELLKELTDSRHHFPLKSFELRRRQDLDMNLVTQFLQKCNQLEALDT
SLIPIEYETFENILPFLPKLKWFNFTGNEDMLRTEDLLPLIEKHCKYIEE
IGINFYYSPCKVERLLLKVKMTSLKRLNLLGSKIYDLNNRTEDTKLGHGV
VLTCDKEYSLPSPRLDTFDSEIVQN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006724XLOC_006724Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00011983TCONS_00011983Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006553Leu-rich_rpt_Cys-con_subtyp
IPR001810F-box_dom
IPR032675L_dom-like
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006553Leucine-rich repeat, cysteine-containing subtypeSMARTSM00367LRR_CC_2coord: 214..239
e-value: 0.3
score: 20.1
coord: 265..290
e-value: 22.0
score: 11.9
IPR001810F-box domainSMARTSM00256fbox_2coord: 6..47
e-value: 1.2E-4
score: 31.5
IPR001810F-box domainPFAMPF12937F-box-likecoord: 3..49
e-value: 4.4E-10
score: 39.2
IPR001810F-box domainPROSITEPS50181FBOXcoord: 1..47
score: 11.802
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 173..313
e-value: 2.9E-12
score: 45.6
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 43..129
e-value: 0.0047
score: 15.4
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 314..447
e-value: 3.4E-5
score: 22.4
NoneNo IPR availableGENE3D1.20.1280.50coord: 1..42
e-value: 8.6E-11
score: 41.1
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 28..293
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 268..431

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00011983-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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