TCONS_00012096-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00012096-protein
Unique NameTCONS_00012096-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length481

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00012096-protein ID=TCONS_00012096-protein|Name=TCONS_00012096-protein|organism=Clytia hemisphaerica|type=polypeptide|length=481bp
MISKALQYVLCYETLFGKGLHQNSKYEKFISTHEDKLKATLDDLQKEEPG
LFTDTKKNQVVLPRYVRVNVLKCSMDVAINRFQTDGFNLVSGKEINEISG
DEFVLDKDIPNVLVFPPNTDLHQYSLYKEGKLFLQDKASCLSAYVLNPPE
RSLVIDGCAAPGNKTTHLACILNNNGSVYSFDLDKKRLRTMEMLVQKAGA
TCVTPKHQDFLKVRHDDKLFSKVEYILLDPSCSGSGIVGRMDNYVDDDEE
NATNEVNEKRLKALSGFQTAALSHALTFPNVQKVLYSTCSIHKQENEDVI
EKAFKRFEEQFDLCHVMPSWKSRGQGEWELAYKCIRAVPEKDFTNGFFVA
MFERKQQSNFQNGTKAVGKEVQINGKETNAGLSSNGIVNSEKKRHSNPQK
GDSDVKICDGKYASLTQCTKDTKIGKHKARDTGNENDAPNKKIKINVDEK
SKQQKVENIFAKKVPSKRKRRLNERVKKPLI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006803XLOC_006803Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00012096TCONS_00012096Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023267RCMT
IPR001678MeTrfase_RsmB/NOP2
IPR029063SAM-dependent_MTases
Vocabulary: Molecular Function
TermDefinition
GO:0008168methyltransferase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008168 methyltransferase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023267RNA (C5-cytosine) methyltransferasePRINTSPR02008RCMTFAMILYcoord: 155..165
score: 65.28
coord: 281..297
score: 42.61
coord: 126..140
score: 29.62
coord: 337..354
score: 30.69
coord: 224..236
score: 50.82
NoneNo IPR availableGENE3D3.40.50.150coord: 135..363
e-value: 3.4E-50
score: 169.9
NoneNo IPR availableGENE3D3.30.70.1170coord: 53..134
e-value: 1.5E-22
score: 79.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 378..405
NoneNo IPR availableCDDcd02440AdoMet_MTasescoord: 154..235
e-value: 0.0013094
score: 36.2539
IPR001678SAM-dependent methyltransferase RsmB/NOP2-typePFAMPF01189Methyltr_RsmB-Fcoord: 143..352
e-value: 2.7E-28
score: 98.9
IPR001678SAM-dependent methyltransferase RsmB/NOP2-typePROSITEPS51686SAM_MT_RSMB_NOPcoord: 54..355
score: 55.507
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 61..355

Blast
[Close]
BLAST of TCONS_00012096-protein vs. Swiss-Prot (Human)
Match: NSUN5 (Probable 28S rRNA (cytosine-C(5))-methyltransferase OS=Homo sapiens GN=NSUN5 PE=1 SV=2)

HSP 1 Score: 290.041 bits (741), Expect = 1.409e-93
Identity = 147/340 (43.24%), Postives = 206/340 (60.59%), Query Frame = 0 
Query:   26 YEKFISTHEDKLKATLDDLQ------KEEPGLFTDTKKNQVV-LPRYVRVNVLKCSMDVAINRFQTDGFNL----VSGKEINEISGDEFVLDKDIPNVLVFPPNTDLHQYSLYKEGKLFLQDKASCLSAYVLNPPERSLVIDGCAAPGNKTTHLACILNNNGSVYSFDLDKKRLRTMEMLVQKAGATCVTPKHQDFLKVRHDDKLFSKVEYILLDPSCSGSGIVGRMDNYVDDDEENATNEVNEKRLKALSGFQTAALSHALTFPNVQKVLYSTCSIHKQENEDVIEKAFKRFEEQFDLCHVMPSWKSRGQGEWELAYKCIRAVPEKDFTNGFFVAMFER 354
            ++  +  H+ +LKA L  L+      + E  L   ++      LPR+VRVN LK   D  ++ F+  GF+      S  ++  + G  F+LD  +P +LVFP  TDLH++ LY+ G L LQD+ASCL A +L+PP  S VID CAAPGNKT+HLA +L N G +++FDLD KRL +M  L+ +AG +C     +DFL V   D  + +V YILLDPSCSGSG+  R        EE      +  RL AL+GFQ  AL HALTFP++Q+++YSTCS+ ++ENEDV+  A ++    F L   +P+W  RG   +  A  C+RA PE   ++GFFVA+ ER
Sbjct:   91 WKALLGRHQARLKAELARLKVHRGVSRNEDLLEVGSRPGPASQLPRFVRVNTLKTCSDDVVDYFKRQGFSYQGRASSLDDLRALKGKHFLLDPLMPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYILLDPSCSGSGMPSR------QLEEPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSTCSLCQEENEDVVRDALQQNPGAFRLAPALPAWPHRGLSTFPGAEHCLRASPETTLSSGFFVAVIER 424
The following BLAST results are available for this feature:
BLAST of TCONS_00012096-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NSUN51.409e-9343.24Probable 28S rRNA (cytosine-C(5))-methyltransferas... [more]
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