TCONS_00012301-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00012301-protein
Unique NameTCONS_00012301-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length182

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00012301-protein ID=TCONS_00012301-protein|Name=TCONS_00012301-protein|organism=Clytia hemisphaerica|type=polypeptide|length=182bp
MEDVENSAPKKEWNLSVDQELRIEVAQDNEAKIMITDGQAEIFGTELVRN
KVYNFRSRAKVAIYTWHGCTVQVTGEVEVGYVSSETPMVVYLNVHTAIEQ
IRQKVEKEGKNTIGPRVMICGPVDVGKSTLSRILLNYAVRMGRRPLFVDL
DVGQGSIAVPGTMGALLVDRPADAEEGIVSSP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006920XLOC_006920Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00012301TCONS_00012301Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032319CLP1_P
IPR032324Clp1_N
IPR027417P-loop_NTPase
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032319Polyribonucleotide 5'-hydroxyl-kinase Clp1, P-loop domainPFAMPF16575CLP1_Pcoord: 121..179
e-value: 3.2E-23
score: 82.4
NoneNo IPR availableGENE3D3.40.50.300coord: 113..179
e-value: 2.9E-9
score: 36.3
NoneNo IPR availableCDDcd00009AAAcoord: 97..149
e-value: 3.10171E-4
score: 37.1255
IPR032324Clp1, N-terminal beta-sandwich domainPFAMPF16573CLP1_Ncoord: 15..104
e-value: 8.9E-33
score: 112.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 114..175

Blast
[Close]
BLAST of TCONS_00012301-protein vs. Swiss-Prot (Human)
Match: CLP1 (Polyribonucleotide 5'-hydroxyl-kinase Clp1 OS=Homo sapiens GN=CLP1 PE=1 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 1.727e-71
Identity = 99/174 (56.90%), Postives = 133/174 (76.44%), Query Frame = 0 
Query:    5 ENSAPKKEWNLSVDQELRIEVAQDNEAKIMITDGQAEIFGTELVRNKVYNFRSRAKVAIYTWHGCTVQVTGEVEVGYVSSETPMVVYLNVHTAIEQIRQKVEKEGKNTIGPRVMICGPVDVGKSTLSRILLNYAVRMGRRPLFVDLDVGQGSIAVPGTMGALLVDRPADAEEGI 178
            ++  P  ++ L  + ELR EV      ++ +  G AEIFGTEL RNK + F + AKVA++TWHGC+VQ++G  EV YVS +TPM++YLN HTA+EQ+R++ EKE +   GPRVM+ GP DVGKST+ R+LLNYAVR+GRRP +V+LDVGQGS+++PGTMGAL ++RPAD EEG 
Sbjct:    7 DDKKPTTKFELERETELRFEVEASQSVQLELLTGMAEIFGTELTRNKKFTFDAGAKVAVFTWHGCSVQLSGRTEVAYVSKDTPMLLYLNTHTALEQMRRQAEKEEER--GPRVMVVGPTDVGKSTVCRLLLNYAVRLGRRPTYVELDVGQGSVSIPGTMGALYIERPADVEEGF 178
The following BLAST results are available for this feature:
BLAST of TCONS_00012301-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CLP11.727e-7156.90Polyribonucleotide 5'-hydroxyl-kinase Clp1 OS=Homo... [more]
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