TCONS_00012388-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00012388-protein
Unique Name	TCONS_00012388-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	207

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00012388-protein ID=TCONS_00012388-protein|Name=TCONS_00012388-protein|organism=Clytia hemisphaerica|type=polypeptide|length=207bp
MGDDFDDLLDEVESKFCTSKKKTNVTKQAVCKSPQHRGTCSAPDQPKVQR
KKKSSADDNLDDIIDDIMIDDGLNLKSLKISGHEENNISPSRSVKKGLKV
KCFAIHIGGTSLVKGPSTSTNTQCCDRMHCTSCDNRIVFFDDYKWDESQC
EYLAFRNYYPDFSRLKKILIPRKGYRAFCCQCSWICTKETVFLKDAKPEF
KWVCTKH

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_006966	XLOC_006966	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00012388	TCONS_00012388	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR029239	C8orf37

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029239	C8orf37 protein	PFAM	PF14996	RMP	coord: 86..207 e-value: 1.5E-34 score: 119.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..57

Blast

[Close]

BLAST of TCONS_00012388-protein vs. Swiss-Prot (Human)
Match: CH037 (Protein C8orf37 OS=Homo sapiens GN=C8orf37 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 5.247e-35
Identity = 80/213 (37.56%), Postives = 122/213 (57.28%), Query Frame = 0

Query:    1 MGDDFDDLLDEVESKFCTSK--KKTNVTKQAVCKSPQHRGTCSAPDQPKVQRKKKSSA----DDNLDDIIDDIMIDDGLNLKSLKISGHEENNISPSRSVKKGLKVKCFAIHIGGTSLVKGPSTSTNTQCCDRMHCTSCDNRIVFFDDYKWDESQCEYLAFRNYYPDFSRLKKILIPRKGYRAFCCQCSWICTKETVFLKDAKPEFKWVCTKH 207
            M +D D+LLDEVESKFCT    ++  V +   C    H    S  +Q K +   +S+     +D+LD +I++I+ +  L+ K  K+      N S   S++ GL   C  +++GG+S+  G  T+ + + CD + C +CD  +V +DDY WD+S C+YL FRN  P+F +LK  LI +KG RA+ CQCSW   +E   L+    + +WVC KH
Sbjct:    1 MAEDLDELLDEVESKFCTPDLLRRGMVEQPKGCGGGTHS---SDRNQAKAKETLRSTETFKKEDDLDSLINEILEEPNLDKKPSKLKSKSSGNTSVRASIE-GLGKSCSPVYLGGSSIPCGIGTNISWRACDHLRCIACDFLVVSYDDYMWDKS-CDYLFFRNNMPEFHKLKAKLIKKKGTRAYACQCSWRTIEEVTDLQ-TDHQLRWVCGKH 207

The following BLAST results are available for this feature:

BLAST of TCONS_00012388-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00012388-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CH037	5.247e-35	37.56	Protein C8orf37 OS=Homo sapiens GN=C8orf37 PE=1 SV...	[more]

You are here

TCONS_00012388-protein (polypeptide) - C. hemisphaerica