Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00012652-protein ID=TCONS_00012652-protein|Name=TCONS_00012652-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1150bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00012652-protein vs. Swiss-Prot (Human)
Match: BRDT (Bromodomain testis-specific protein OS=Homo sapiens GN=BRDT PE=1 SV=4) HSP 1 Score: 439.113 bits (1128), Expect = 6.991e-137 Identity = 294/709 (41.47%), Postives = 408/709 (57.55%), Query Frame = 0 Query: 2 HTFAWPFTKPVDAVKLRIPDYYEIIKRPMDLGTIKKKLEHNDYQSSKECIEEFRLVFNNCYQYNKPGEDVVVMAETVEKFFSEKLAMMPPEEYEIIKGAKSVGKPAVKP--AVTSTGDPLEPAA--KKIKQ---PINKPRTTAADSTQPTLTSPDVSTIAEVDKQLAATSPSSVVTSTVAMTPDLMTPKLPSRSASLVKSGVKRKKADTTTPGTPAISTPTTGLSTPLLAAK---IPVRRESSNRTIKKPTRELPGEQEIAPPSGKKKGKLSEQLKYCNNILKELFAKKHESCAWPFYKPVAVDELGLHDYLDIIKQPMDLTSIRQKMDTREYNTPYEFATDVRLIFSNCYKYNPPDHDVVKMARKLQDVFEYKFARMPDEPPEQETESVAATPSSTTNTTTKITRSSNKIPAANSVEAKSESEEDSDNDSSDDSGNDSSEDRKKTLAMLEAQLISVHEELSKLTKVERDRKAEKSGKKGKKKDKEKDIKKDKKEVKVKVETKDKNKNIKKKTKDKKKDDTNLDGVKSAKNDKKKETKTPAKKKTAAERSKKSKIASKKEYLPEDSDDEENVKNMSYDEKRQLSLDINKLPGDKLGKVVHIIQTKEPSLRGNNPDEIEIDFETLRPATLRELEKYVNSCVKKKKTPVKKP--KSAEDREALQAKKKEELEKRLQDVSGKLQAVAPKKPKKSSKKDPNSNEPKSSRLSES 698 H+F+WPF +PVDAVKL++PDYY IIK PMDL TIKK+LE+ Y + ECIE+F +F+NCY YNKPG+D+V+MA+ +EK F +KL+ MP EE + G K K + AV+S + P+A K KQ P P+T+ SP L +SV +S S++A+ V GVKRK ADTTTP T A+ + +P K +P +E+ P LP Q+ + K K++EQL++C+ ILKE+ AKKH S AWPFY PV V+ LGLH+Y D++K PMDL +I++KMD +EY Y+FA DVRL+F NCYKYNPPDH+VV MAR LQDVFE F+++P EP E + + + T TT + E+++ SS+ + +D SED E + +L K++ KA + +V +V + NK +K K+KKK+ N S +N +K + K+K+ + KK K ++++ S+DE+N K M+YDEKRQLSL+INKLPGDKLG+VVHIIQ++EPSL +NPDEIEIDFETL+ +TLRELEKYV++C++K+ P+K P K +E L ++KK+ELEKRL DV+ +L + K+ KS K P+ SRLSES Sbjct: 46 HSFSWPFQRPVDAVKLQLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQMPQEEQ--VVGVKERIKKGTQQNIAVSSAKEKSSPSATEKVFKQQEIPSVFPKTS---------ISP-----------LNVVQGASVNSS--------------SQTAAQVTKGVKRK-ADTTTPATSAVKASSEF--SPTFTEKSVALPPIKENM------PKNVLPDSQQ--QYNVVKTVKVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPIEPVE--SMPLCYIKTDITETTGR---------------------ENTNEASSEGNSSDDSED----------------ERVKRLAKLQEQLKA----------------VHQQLQVLSQVPFRKLNKKKEKSKKEKKKEKVN----NSNENPRKMCEQMRLKEKSKRNQPKKRK----QQFIGLKSEDEDNAKPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREPSLSNSNPDEIEIDFETLKASTLRELEKYVSACLRKR--PLKPPAKKIMMSKEELHSQKKQELEKRLLDVNNQLNS--RKRQTKSDKTQPSKAVENVSRLSES 640 HSP 2 Score: 103.605 bits (257), Expect = 3.038e-22 Identity = 51/117 (43.59%), Postives = 74/117 (63.25%), Query Frame = 0 Query: 257 KKKGKLSEQLKYCNN-ILKELFAKKHESCAWPFYKPVAVDELGLHDYLDIIKQPMDLTSIRQKMDTREYNTPYEFATDVRLIFSNCYKYNPPDHDVVKMARKLQDVFEYKFARMPDE 372 KK G+L+ QL+Y +LK+L+ KH S +WPF +PV +L L DY IIK PMDL +I+++++ + Y E D +FSNCY YN P D+V MA+ L+ +F K ++MP E Sbjct: 23 KKNGRLTNQLQYLQKVVLKDLW--KH-SFSWPFQRPVDAVKLQLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQMPQE 136 The following BLAST results are available for this feature:
BLAST of TCONS_00012652-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
|