TCONS_00012654-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00012654-protein
Unique NameTCONS_00012654-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length185

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00012654-protein ID=TCONS_00012654-protein|Name=TCONS_00012654-protein|organism=Clytia hemisphaerica|type=polypeptide|length=185bp
MAITKPVGGTSSSDHHSKSKLFEGYEFDKEGFEKLFHELDVNKDGRIGVD
ELSDGLKRLGIHQIPGQAQKIIDIGDIDETEELSFDEFLKYCHDHEQKVW
LIFKKFDTNNSGTINKSELESQFKHLGVKVSESEIDMLLKKMDKDGSLHI
DWDEWRKFHLLNPHAHNMANIIRFWRHSTWWFKCF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007098XLOC_007098Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00012654TCONS_00012654Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 31..59
e-value: 0.0025
score: 27.1
coord: 98..126
e-value: 1.4
score: 16.5
coord: 134..162
e-value: 43.0
score: 4.6
coord: 67..95
e-value: 4.4
score: 12.6
IPR002048EF-hand domainPFAMPF13202EF-hand_5coord: 33..53
e-value: 2.2E-4
score: 20.5
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 102..157
e-value: 6.1E-10
score: 39.4
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 94..129
score: 13.063
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 27..62
score: 14.597
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 130..165
score: 9.743
IPR002048EF-hand domainCDDcd00051EFhcoord: 102..159
e-value: 5.97849E-12
score: 56.7873
IPR002048EF-hand domainCDDcd00051EFhcoord: 32..90
e-value: 1.59862E-8
score: 47.1573
NoneNo IPR availableGENE3D1.10.238.10coord: 47..79
e-value: 1.2E-10
score: 41.1
NoneNo IPR availableGENE3D1.10.238.10coord: 12..46
e-value: 8.7E-5
score: 21.8
coord: 80..112
e-value: 8.3E-12
score: 44.3
coord: 146..177
e-value: 0.0015
score: 17.8
NoneNo IPR availableGENE3D1.10.238.10coord: 113..145
e-value: 1.3E-14
score: 53.6
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 40..52
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 107..119
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 29..182

Blast
[Close]
BLAST of TCONS_00012654-protein vs. Swiss-Prot (Human)
Match: SCMC1 (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Homo sapiens GN=SLC25A24 PE=1 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 8.720e-38
Identity = 63/148 (42.57%), Postives = 95/148 (64.19%), Query Frame = 0 
Query:   32 FEKLFHELDVNKDGRIGVDELSDGLKRLGIHQIPGQAQKIIDIGDIDETEELSFDEFLKYCHDHEQKVWLIFKKFDTNNSGTINKSELESQFKHLGVKVSESEIDMLLKKMDKDGSLHIDWDEWRKFHLLNPHAHNMANIIRFWRHST 179
            +E LF  LD N DG + + EL +GL+ LGI       +KI   GD+++  +L F+EF+KY  DHE+K+ L FK  D NN G I  SE+    + LG+ +SE + +++L+ +D DG++ +DW+EWR + L NP   ++  IIRFW+HST
Sbjct:   24 YETLFQALDRNGDGVVDIGELQEGLRNLGIPLGQDAEEKIFTTGDVNKDGKLDFEEFMKYLKDHEKKMKLAFKSLDKNNDGKIEASEIVQSLQTLGLTISEQQAELILQSIDVDGTMTVDWNEWRDYFLFNP-VTDIEEIIRFWKHST 170
The following BLAST results are available for this feature:
BLAST of TCONS_00012654-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SCMC18.720e-3842.57Calcium-binding mitochondrial carrier protein SCaM... [more]
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