TCONS_00012847-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00012847-protein
Unique NameTCONS_00012847-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length929

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00012847-protein ID=TCONS_00012847-protein|Name=TCONS_00012847-protein|organism=Clytia hemisphaerica|type=polypeptide|length=929bp
MSMLLSPKIIPGSLHAANKSACDWGWQGYVAYGCQNYVVVVDPKTSQVLQ
TLQNHAAPICGIKWHQEKFYHDLHSPYDLKLAAANTAGYILIWDIRAGAL
LNDFVEANKLPVCMEWLTGHDVSHDLLLVLYNPNVMILWNSDTGVKLWKK
TFTDTVVQMVIDPFKNTNMTVMSTDWIMLVTDLSLSQAPSEKGRKFYMSN
NAASPSGSLTSTSTSNLNRNLGNQTKSTIQRIKSVYGDLRGGKTEEEIEA
TCDCLQIAYLKASRNHVLILFPREILILDMEIGQSLGSFSIESTSPSFQA
VYPCQQRDILFLLHENGSISMRAVRSPPAVPYMEDDDPERVLSQRISLDI
IYDIKCHSDVFRLSRASRLMGFCVDPVYECQNVIILGDGRCLFWALSPPA
GASSFHKENLKWKSLPDFVEIDRFKNEYEQISLNEVIPCLLSFGDDQMKK
KYSKPRFVLEGMSESIALNPVCCRMCPPMTTRNFSTYRPLLAVGCNNGIL
QIFNLSKGNLVKHLMMTTHSIKGLEWISLSSILVWFQGSSTNNKSEIVHV
DINTGLTKVLPSSRGLKESTVASLKVSQVKNYFLVLFKNKSAELWDATNL
CQLREFPGNFPTITAFGWSPASYSSKFGKKKNKSNAPRDAASAPDLSETV
SSKVLDSSVNKEAAKKQAKMKEHLVFTDTDGTVYHYVVEGTSLKDGSKVP
PEAGMGTVSYITWKQDVLVLGDIDGNVNFWDLKGKVSRVFPTNRGPIKRL
KFAPGKGNMRILMLFNDGVEIWDSVEIRSLANIKTSKDGIAILDADWLSS
SLPVLLLSDGSARVMDPVLTSANSNVQEKDLDQALFNPRLLEPAHSLKMK
GVLQHQKWREQYKAKEFSDSREERAVQDSLDNMPEDICDRLENCPLGTAE
RCSKVARIYGDESDVLFWNVALHXQDLWR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007200XLOC_007200Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00012847TCONS_00012847Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 733..773
e-value: 31.0
score: 7.6
coord: 45..94
e-value: 0.13
score: 21.4
coord: 599..687
e-value: 250.0
score: 1.9
coord: 469..504
e-value: 400.0
score: 0.5
coord: 553..596
e-value: 69.0
score: 5.4
coord: 692..731
e-value: 290.0
score: 1.5
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 720..831
e-value: 1.5E-5
score: 23.9
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 391..719
e-value: 2.8E-18
score: 65.4
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 15..390
e-value: 1.2E-16
score: 60.0
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 718..732
IPR017986WD40-repeat-containing domainSUPERFAMILY50978WD40 repeat-likecoord: 670..786
coord: 484..620
IPR017986WD40-repeat-containing domainSUPERFAMILY50978WD40 repeat-likecoord: 245..319
coord: 15..189

Blast
[Close]
BLAST of TCONS_00012847-protein vs. Swiss-Prot (Human)
Match: WDR11 (WD repeat-containing protein 11 OS=Homo sapiens GN=WDR11 PE=1 SV=1)

HSP 1 Score: 655.21 bits (1689), Expect = 0.000e+0
Identity = 346/944 (36.65%), Postives = 553/944 (58.58%), Query Frame = 0 
Query:    5 LSPKIIPGSLHAANKSACDWGWQGYVAYGCQNYVVVVDPKTSQVLQTLQNHAAPICGIKWHQEKFYHDLHSPYDLKLAAANTAGYILIWDIRAGALLNDFVEANKLPVCMEWLTGHDVSHDLLLVLYNPNVMILWNSDTGVKLWKKTFTDTVVQMVIDPFKNTNMTVMSTDWIMLVTDLSLSQAPSEKGRKFYMSNNAASPSGSLTSTSTSNLNRNLGNQTKSTIQRIKSVYGDLRGGKTEEEIEATCDCLQIAYLKASRNHVLILFPREILILDMEIGQSLGSFSIESTSPSFQAVYPCQQRDILFLLHENGSISMRAVRSPPAVPYMEDDDPERVLSQRISLDIIYDIKCHSDVFRLSRASRLMGFCVDPVYECQNVIILGDGRCLFWALSPPAGASSFHKENLKWKSLPDF-------VEIDRFKNEYEQISLNEVIPCLLSFGDDQMKKKYSKP---RFVLEGMSESIALNPVCCRMCPPMTTRNFSTYRPLLAVGCNNGILQIFNLSKGNLVKHLMMTTHSIKGLEWISLSSILVWFQGSSTNN----KSEIVHVDINTGLTKVLPSSRGLKESTVASLKVSQVKNYFLVLFKNKSAELWDATNLCQLREFPGNFPTITAFGWSPASYSSKFGKKK---NKSNAPRDAASAPDLSETVSSKV--LDSSVNKEAAKKQAKMKEHLVFTDTDGTVYHYVVEGTSLKDGSKVPPEAGMGTVSYITWKQDVLVLGDIDGNVNFWDLKGKVSRVFPTNRGPIKRLKFAPGKGNMRILMLFNDGVEIWDSVEIRSLANIKTSKD-GIAILDADWLSSSLPVLLLSDGSARVMDPVLTSANSNVQEKDLDQALFNPRLLEPAHSLKMKGVLQHQKWREQYKAK----EFSDSRE-ERAVQDSLDNMPEDICDRLENCPLGTAERCSKVARIYGDESDVLFWNVALH 923
            +S + + G+L+A NK+A DWGWQG +AYGC + VVV+D  T+Q LQ L+ H A +  +KW +E ++H++ SPY L+LA+A+  G I++WD+ AG    +  E  K    ++WL   D S DLLL ++ PN ++LWN+DTG KLWKK++ D ++    DPF  +++T+++++ I+ ++D S S+ PS  G+K Y+S+  +SP+ +  +T+T           K  + ++K +   +   K   E     DCLQ+AYL + RNH+L+L+PREILILD+E+ Q++G  +IE T   F  V PC QRD LF LHENG I++R  RS   +    +++P+    Q ++    YD++   D  R+++  R       PV E    +++ DGR + W L   +   + +  N      P +       + +   +N+   +SL+ +I      G++  +    +    +F+L G+   +       RMCPP+TT+N   Y+PLLAVG +NG + +++L+ G L K L + +  +KG+EW SL+S L  F  S+ NN    ++E+  VD+ TG +      RG  ES +  +KVS +K Y  V+F++K  ELWD      LRE   NFPTITA  WSP+       KK+    ++ A +   S  +LS   SS +  L  + +K    +    +EH VFTD DG VYH  VEG S+KD +++PP+  MG+++ I WK D LVLGD+DGN+NFWDLKG+VSR  PT+R  +++++FAPGKGN +++ ++NDG E+WD+ E++ ++++++ ++    ILD DW +S   +L   DG  RV++  + SA   + E++L + ++ P LL P  SL +K  L HQ W  QY       ++ ++ E +  +Q+ L+++  DI   L +      +RC  V+R+YGDES++ FW VA H
Sbjct:   10 VSARTLTGALNAHNKAAVDWGWQGLIAYGCHSLVVVIDSITAQTLQVLEKHKADVVKVKWARENYHHNIGSPYCLRLASADVNGKIIVWDVAAGVAQCEIQEHAKPIQDVQWLWNQDASRDLLLAIHPPNYIVLWNADTGTKLWKKSYADNILSFSFDPFDPSHLTLLTSEGIVFISDFSPSKPPSGPGKKVYISSPHSSPAHNKLATATG---------AKKALNKVKIL---ITQEKPSAEFITLNDCLQLAYLPSKRNHMLLLYPREILILDLEVNQTVGVIAIERTGVPFLQVIPCFQRDGLFCLHENGCITLRVRRSYNNIFTTSNEEPDPDPVQELT----YDLRSQCDAIRVTKTVRPFSMVCCPVNENAAALVVSDGRVMIWELK--SAVCNRNSRNSSSGVSPLYSPVSFCGIPVGVLQNKLPDLSLDNMIGQSAIAGEEHPRGSILREVHLKFLLTGLLSGLPAPQFAIRMCPPLTTKNIKMYQPLLAVGTSNGSVLVYHLTSGLLHKELSIHSCEVKGIEWTSLTSFLS-FATSTPNNMGLVRNELQLVDLPTGRSIAFRGERGNDESAIEMIKVSHLKQYLAVVFRDKPLELWDVRTCTLLREMSKNFPTITALEWSPSHNLKSLRKKQLATREAMARQTVVSDTELSIVESSVISLLQEAESKSELSQNISAREHFVFTDIDGQVYHLTVEGNSVKDSARIPPDGSMGSITCIAWKGDTLVLGDMDGNLNFWDLKGRVSRGIPTHRSWVRKIRFAPGKGNQKLIAMYNDGAEVWDTKEVQMVSSLRSGRNVTFRILDVDWCTSDKVILASDDGCIRVLEMSMKSACFRMDEQELTEPVWCPYLLVPRASLALKAFLLHQPWNGQYSLDISHVDYPENEEIKNLLQEQLNSLSNDIKKLLLDPEFTLLQRCLLVSRLYGDESELHFWTVAAH 934
The following BLAST results are available for this feature:
BLAST of TCONS_00012847-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
WDR110.000e+036.65WD repeat-containing protein 11 OS=Homo sapiens GN... [more]
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