TCONS_00013066-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00013066-protein
Unique NameTCONS_00013066-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length278

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00013066-protein ID=TCONS_00013066-protein|Name=TCONS_00013066-protein|organism=Clytia hemisphaerica|type=polypeptide|length=278bp
MMDALAVVRHLHSLAEKPENRATIVKDQGCLPGLVLFLDNKESDVVLLVL
KTLQLLAEHAPNRKIMQNEVGMLESLKKVKEDERFQGVPDIKTRANRLVN
LLTKSTRQTASSARVHTVAPTSQKFFVGTQNKKAKLIVLQITGLGDEESK
RVCEKCLLSVKGVVSFTFNMPKKRCMVRVTQVVSAEMLCNAVNESKILNA
EQIAKNKSGEEVVISFGKNPSVPSEEREEVDFPDYLPEEDPVETSKTALA
KTGDKDKNGSGSGWLSGVSSFISNSLYW
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007316XLOC_007316Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00013066TCONS_00013066Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR006121HMA_dom
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0005488binding
Vocabulary: Biological Process
TermDefinition
GO:0030001metal ion transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030001 metal ion transport
molecular_function GO:0005488 binding
molecular_function GO:0046872 metal ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 4..114
e-value: 1.1E-8
score: 34.0
NoneNo IPR availableGENE3D3.30.70.100coord: 133..231
e-value: 6.2E-4
score: 19.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 217..266
IPR006121Heavy metal-associated domain, HMASUPERFAMILY55008HMA, heavy metal-associated domaincoord: 137..194
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 6..111

Blast
[Close]
BLAST of TCONS_00013066-protein vs. Swiss-Prot (Human)
Match: ARMC1 (Armadillo repeat-containing protein 1 OS=Homo sapiens GN=ARMC1 PE=1 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.401e-65
Identity = 110/277 (39.71%), Postives = 163/277 (58.84%), Query Frame = 0 
Query:    3 DALAVVRHLHSLAEKPENRATIVKDQGCLPGLVLFLDNKESDVVLLVLKTLQLLAEHAPNRKIMQNEVGMLESLKKVKEDERFQGVPDIKTRANRLVNLLTKSTRQTASSARVHTVAPTSQKFFVGTQNKKAKLIVLQITGLGDEESKRVCEKCLLSVKGVVSFTFNMPKKRCMVRVTQVVSAEMLCNAVNESKILNAEQIAKNKSGEEVVISFGKNPSVPSEEREEVDFPDYLPE-EDPVETSKTALAKTGDKDKNGSGSGWLSGVSSFISNSLYW 278
            DAL+VV  L  LA  P NR  IV+DQGCLPGL+LF+D+    VV   L  L+ LAE   NR+ M+ E+GM+ SL+ V +     G  + K  A+ + ++L  S      S           +FF+GT NK+AK +VL I GL D   + +CE+ LL +KGV+SFTF M  +RC+VR+   + AE L +A+  +K++ A+Q+ K++SGEE+++ F      P E  +  + PDYLPE E P +    A+++ G   +   G+ WLS  ++F+S S YW
Sbjct:   13 DALSVVNQLRDLAADPLNRRAIVQDQGCLPGLILFMDHPNPPVVHSALLALRYLAECRANREKMKGELGMMLSLQNVIQKTTTPG--ETKLLASEIYDILQSSNMADGDSFNEMNSRRRKAQFFLGTTNKRAKTVVLHIDGLDDTSRRNLCEEALLKIKGVISFTFQMAVQRCVVRIRSDLKAEALASAIASTKVMKAQQVVKSESGEEMLVPFQ---DTPVEVEQNTELPDYLPEDESPTKEQDKAVSRVGSHPEG--GASWLSTAANFLSRSFYW 282
The following BLAST results are available for this feature:
BLAST of TCONS_00013066-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ARMC12.401e-6539.71Armadillo repeat-containing protein 1 OS=Homo sapi... [more]
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