TCONS_00013373-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00013373-protein
Unique NameTCONS_00013373-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1185

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00013373-protein ID=TCONS_00013373-protein|Name=TCONS_00013373-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1185bp
MICDIMPTLSEDGDMPGDGSMEDNNFEQLMVNMLDERDKLMETLRETQES
LTNSKNNLKEAELERDTLLKGFDLVLQKCELDRDNLIKKLMSYEGKNADD
SIIGRLKDQRVPIAEEFVSVSKELYQIREKMIERNEEIFELKAERSNTKL
LLEHLESLVSRHERSLRMTVVKRQAQSSAGVSSEVEVLKALKSLFEHHKA
LDEKVRERLRMAVEKANSLEEDLSTANQEIEHLQQELEYAREKRRSLRSN
SDVIDGPSSEDSEKVEELQEKIRDLKYQLEKSQKESQDTRERFSSLEEQI
NSTTKKANYSFENNQRVQKELQEALAQKGDLEERMMTLEKRYVRSQNDLS
AAADEHEKYRAEILSLQTMMEQRSEKINALQEQCQFYEMKCSQTMKHAEE
LPKIQQELENRKAALNAAEERNFTAEEQLQNMHVQIEELSAELTRSKERE
QMTEDHNNKLKNTVDKLLTESNDRLQQHLKEKMQSIDEKSHVAQELEKSK
LLVEDLRKQTSSLESELEKLKNTQYRHQNTLNVSSPRSPDSPRFTQTEPT
WPKTNQANLVHTNPNKHYIPPHAEFDGSDASSVHSSTSKLSSVPPVINTE
NITSNDAQVLANVLQKQLDAINEELALLQVEHRTTEKLTEQIEKRVGSET
NSLDELSVGSSSKGSDKLDGDRKNLYSKPFPVDNQMMRPRPDLNLRSGDA
EDGNLAFTFSSYDPVDTKPLMLKAGRSQEMLTETETDTPSSQPSDSTGSE
GSIRAKGMTIPWNISSPYESEAYFDFPSNASSLTSSMESLNRRGPNKNKG
LKNSIGKIFSTKGKLKPRDMGSSRSEDLDSTAETHRDAETRMKRKLLEDV
IASGAPFAAWNAPTILAWLELWVKLPEWYIQACRANVKSGSIMSALSDYE
IQHEIGVNNPLHRLKLRLAIREMINVTSPISPPTAKTSLVFGDMNHFWIA
SEWLASLGLPQYKYPFIENLVDARMLEHITKKDYTKYLKVVDSFHRTSLT
CGTKCLEVLNYDRKYLEKRRKEAETEDKDVLVWSNARVIRWAHNIGLEDY
ADFLRQSGVHGALIALDENFDVELFAYYLQIPSTNEKKRGLLEREYNKLL
VLCHEYKTSTQSDLGDGDFKRSKSWRKKFKKEKLSTKDKRSKDNDTLKRP
GSESSDLNDSISPGRRQRKSPNSERKYYNMRGGPS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007474XLOC_007474Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00013373TCONS_00013373Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001660SAM
IPR013761SAM/pointed
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 401..449
NoneNo IPR availableCOILSCoilCoilcoord: 202..250
NoneNo IPR availableCOILSCoilCoilcoord: 76..96
NoneNo IPR availableCOILSCoilCoilcoord: 30..71
NoneNo IPR availableCOILSCoilCoilcoord: 1006..1026
NoneNo IPR availableCOILSCoilCoilcoord: 258..299
NoneNo IPR availableCOILSCoilCoilcoord: 496..523
NoneNo IPR availableCOILSCoilCoilcoord: 314..390
NoneNo IPR availableCOILSCoilCoilcoord: 604..638
NoneNo IPR availableGENE3D1.20.1170.10coord: 462..678
e-value: 3.7E-7
score: 28.8
NoneNo IPR availableGENE3D1.10.287.620coord: 312..461
e-value: 1.6E-7
score: 30.5
NoneNo IPR availableGENE3D1.20.5.170coord: 191..307
e-value: 3.1E-5
score: 23.5
NoneNo IPR availableGENE3D1.10.150.50coord: 1022..1116
e-value: 5.2E-10
score: 39.1
NoneNo IPR availableGENE3D1.10.150.50coord: 947..1021
e-value: 2.6E-11
score: 43.2
NoneNo IPR availableGENE3D1.10.150.50coord: 850..929
e-value: 8.1E-12
score: 44.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 784..836
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 530..551
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1126..1185
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 644..700
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 729..758
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 241..265
NoneNo IPR availableCDDcd09568SAM_liprin-alpha1,2,3,4_repeat3coord: 1029..1100
e-value: 5.9751E-34
score: 125.508
NoneNo IPR availableCDDcd09565SAM_liprin-alpha1,2,3,4_repeat2coord: 944..1009
e-value: 2.27909E-33
score: 123.737
NoneNo IPR availableCDDcd09562SAM_liprin-alpha1,2,3,4_repeat1coord: 857..927
e-value: 7.41288E-41
score: 145.4
IPR001660Sterile alpha motif domainSMARTSM00454SAM_4coord: 857..926
e-value: 9.2E-6
score: 35.2
coord: 942..1009
e-value: 0.0055
score: 25.9
coord: 1030..1102
e-value: 3.2
score: 13.4
IPR001660Sterile alpha motif domainPFAMPF00536SAM_1coord: 944..1006
e-value: 8.1E-11
score: 42.1
IPR001660Sterile alpha motif domainPFAMPF07647SAM_2coord: 1030..1064
e-value: 2.7E-4
score: 20.9
IPR001660Sterile alpha motif domainPROSITEPS50105SAM_DOMAINcoord: 1033..1102
score: 9.217
IPR001660Sterile alpha motif domainPROSITEPS50105SAM_DOMAINcoord: 951..1009
score: 11.071
IPR001660Sterile alpha motif domainPROSITEPS50105SAM_DOMAINcoord: 860..926
score: 13.036
IPR013761Sterile alpha motif/pointed domainSUPERFAMILY47769SAM/Pointed domaincoord: 856..929
IPR013761Sterile alpha motif/pointed domainSUPERFAMILY47769SAM/Pointed domaincoord: 1026..1066
IPR013761Sterile alpha motif/pointed domainSUPERFAMILY47769SAM/Pointed domaincoord: 951..1011

Blast
[Close]
BLAST of TCONS_00013373-protein vs. Swiss-Prot (Human)
Match: LIPA2 (Liprin-alpha-2 OS=Homo sapiens GN=PPFIA2 PE=1 SV=2)

HSP 1 Score: 773.852 bits (1997), Expect = 0.000e+0
Identity = 504/1253 (40.22%), Postives = 726/1253 (57.94%), Query Frame = 0 
Query:    1 MICDIMPTLSEDGDMPGDGSMEDN-----NFEQLMVNMLDERDKLMETLRETQESLTNSKNNLKEAELERDTLLKGFDLVLQKCELDRDNLIKKLMSYEGKNADDSIIGRLKDQRVPIAEEFVSVSKELYQIREKMIERNEEIFELKAERSNTKLLLEHLESLVSRHERSLRMTVVKRQAQSSAGVSSEVEVLKALKSLFEHHKALDEKVRERLRMAVEKANSLEEDLSTANQEIEHLQQELEYAREKRRSLRSNSDVIDGPSSEDSEKVEELQ------------EKIRDLKYQLEKSQKESQDTRERFSSLEEQINSTTKKANYSF-------ENNQRVQKELQEALAQKGDLEERMMTLEKRYVRSQNDLSAAADEHEKYRAEILSLQTMMEQRSEKINALQEQCQFYEMKCSQTMKHAEELPKIQQELENRKAALNAAEERNFTAEEQLQNMHVQIEELSAELTRSKEREQMTEDHNNKLKNTVDKLLTESNDRLQQHLKEKMQSIDEKSHVAQE-------LEKSKLLVEDLRKQTSSLESELEKLK------------------------------NTQYRHQNTLNVSSPRSP------DSPRF-TQTEPTWPKTNQANLVHTNPNKHYIPPHAEFDGSDASSVHSSTSKLSSVPPVINTENITSNDAQVLANVLQKQLDAINEELALLQVEHRTTEKLTEQIEKRVGSETNSLDELSVGSSSKGSDKLDGDRKNLYSKPFPVDNQMMRPRPDLNLRSGDAEDGNLAFTFSSYDPVDTKPLMLKAGRSQEMLTETETDTPSSQPSDSTGSEGSIRAKGMTIPWNISSPYESEAYFDFPSNA-------SSLTSSMESLNRRGPNKNKGLKNSIGKIFSTKGKLKPRDMGSSRS-EDLDSTAE---------THRDAETRMKRK--LLEDVIASGAPFAAWNAPTILAWLELWVKLPEWYIQACRANVKSGSIMSALSDYEIQHEIGVNNPLHRLKLRLAIREMINVTSPISPPTAKT-------------------------------------SLVFGDMNHFWIASEWLASLGLPQYKYPFIENLVDARMLEHITKKDYTKYLKVVDSFHRTSLTCGTKCLEVLNYDRKYLEKRRKEAETEDKDVLVWSNARVIRWAHNIGLEDYADFLRQSGVHGALIALDENFDVELFAYYLQIPSTNEKKRGLLEREYNKLLVLCHEYKTSTQSDLGDGDFKRSKSWRKKF 1129
            M+C++MPT++ED  M   GS         +FEQLMVNMLDERD+L++TLRETQESL+ ++  L++   +RD+L +  +  L +   D ++L   L   +G +                  EF +++KEL   RE+++E+ EEI ELKAER+NT+LLLEHLE LVSRHERSLRMTVVKRQAQS +GVSSEVEVLKALKSLFEHHKALDEKVRERLR+++E+ ++LEE+L+ ANQEI  L+++  + + K  S   +++       E  +KV E +             +I +L+  LEK   E    +ER ++L  ++    ++A  +        E N + Q++++EA+AQK D+EER+ TLEKRY+ +Q + ++  D ++K   E+ + + ++ Q  EK   LQE+ +  E K  QTM+ AE LP+++ EL  R AAL  AEER+   EE+++++  Q+EE + EL R+++RE+M E+HN +L +TVD+LLTESN+RLQ HLKE+M +++EK+ + QE       LE+S    E L ++   L SEL++LK                              ++Q  ++ T  +  PR        D P+  +  +  W +T Q  ++ ++P +      ++ D  D  ++ SS   LS             +DAQ LA +LQ+QLDAIN+E+ L+Q E  +TE   E+IE RV S   SL+ L++     G+        +  +   P         P L  RS   E   +         V T P  L+  R +  + E +     +     T    + RA  MT    + S Y ++A      +         S  SS +SL++  P K KG+K+SIG++F  K K +   +G  R   + ++ A+         T  + + R+K+K  LLE+    G PFA W+ PT++AWLELW+ +P WY+ ACRANVKSG+IMSALSD EIQ EIG++NPLHRLKLRLAI+EM+++TSP +PPT++T                                     +L +GDMNH WI +EWL SLGLPQY+  F+E LVDARML+H+TKKD   +LK+VDSFHRTSL  G  CL+ LNYDRK LE+RR+ ++ E KDVLVWSN RVIRW   IGL +YA+ + +SGVHG+LIALDENFD    A  LQIP+ N + R +LEREYN LL L  E +   +SD  D +F+R  +WR++F
Sbjct:    1 MMCEVMPTINEDTPMSQRGSQSSGSDSDSHFEQLMVNMLDERDRLLDTLRETQESLSLAQQRLQDVIYDRDSLQRQLNSALPQ---DIESLTGGLAGSKGADPP----------------EFAALTKELNACREQLLEKEEEISELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQAQSPSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIVALREQNVHIQRKMASSEGSTESEHLEGMEPGQKVHEKRLSNGSIDSTDETSQIVELQELLEKQNYEMAQMKERLAALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERITTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTMRKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEEKNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVLIQESETFRKNLEESLHDKERLAEEIEKLRSELDQLKMRTGSLIEPTIPRTHLDTSAELRYSVGSLVDSQSDYRTTKVIRRPRRGRMGVRRDEPKVKSLGDHEWNRTQQIGVLSSHPFESDTE-MSDIDDDDRETIFSSMDLLSPS---------GHSDAQTLAMMLQEQLDAINKEIRLIQEEKESTELRAEEIENRVAS--VSLEGLNLARVHPGTSITASVTASSLASSSPPSGH---STPKLTPRSPAREMDRMG--------VMTLPSDLRKHRRKIAVVEEDGREDKATIKCETSPPPTPRALRMT--HTLPSSYHNDARSSLSVSLEPESLGLGSANSSQDSLHK-APKK-KGIKSSIGRLFGKKEKAR---LGQLRGFMETEAAAQESLGLGKLGTQAEKDRRLKKKHELLEEARRKGLPFAQWDGPTVVAWLELWLGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNPLHRLKLRLAIQEMVSLTSPSAPPTSRTPSGNVWVTHEEMENLAAPAKTKESEEGSWAQCPVFLQTLAYGDMNHEWIGNEWLPSLGLPQYRSYFMECLVDARMLDHLTKKDLRVHLKMVDSFHRTSLQYGIMCLKRLNYDRKELERRREASQHEIKDVLVWSNDRVIRWIQAIGLREYANNILESGVHGSLIALDENFDYSSLALLLQIPTQNTQARQILEREYNNLLALGTERRLD-ESD--DKNFRRGSTWRRQF 1201
The following BLAST results are available for this feature:
BLAST of TCONS_00013373-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LIPA20.000e+040.22Liprin-alpha-2 OS=Homo sapiens GN=PPFIA2 PE=1 SV=2[more]
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