TCONS_00013468-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00013468-protein
Unique Name	TCONS_00013468-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	561

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00013468-protein ID=TCONS_00013468-protein|Name=TCONS_00013468-protein|organism=Clytia hemisphaerica|type=polypeptide|length=561bp
MASAFSGHSSQSFDHSSHSALERSQSIPWDNFSSWISCICVVTFDLELGQ
VIEKVYPEHYTLTETEKSNICYLSFPDSNTGCMGDIQFHFRIRSEKTPRS
ISRHLDAALKKDFQHYYGCVSFRQVKDSTIKRGYFQKSLVVLSHLPFIDL
YLYLAKIIAPEFFENGEVALETVCYQIDRWPCPYPGQSLHLPVMGEVIEV
KVPINVSKIKPKPVKKTLPKEIQPSSFFHCGYKAGLFHCFEKVLTHLHLL
WELVLLSEPLVVMAPSPGICSASVQSLISLISPLPYVCDYRPYFTIHDSE
LKEYTGRTHTPPNIILGVTNPFFAKTLQMWPHILRIGEMPSLSMNKKNKK
SQESKPGVYTKYKPCLDRDKTLLKQLQKTNPNGSRPIEVQNAIVRNYMTE
LTQSFMIPLERYIGSLMPLQRSISPWRSPPKLRRFNIEEFIQTLPQYGPQ
LTSKMKGNWQALYRKFFSSPNFESWFEVKKKEVNQKLEILHLEALSTANL
DQFLKSKDEVELVDLYTQMKLKIQKCRSLHISSKVQHDIFLQTQKILAAL
PPDLQEMIRRS

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_007526	XLOC_007526	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00013468	TCONS_00013468	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR018307	ABL9/DENND6_dom

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018307	AVL9/DENND6 domain	PFAM	PF09794	Avl9	coord: 36..168 e-value: 2.5E-6 score: 26.3
None	No IPR available	PFAM	PF08616	SPA	coord: 236..338 e-value: 1.7E-14 score: 53.6

Blast

[Close]

BLAST of TCONS_00013468-protein vs. Swiss-Prot (Human)
Match: DEN6B (Protein DENND6B OS=Homo sapiens GN=DENND6B PE=2 SV=1)

HSP 1 Score: 555.829 bits (1431), Expect = 0.000e+0
Identity = 273/563 (48.49%), Postives = 391/563 (69.45%), Query Frame = 0

Query:   16 SSHSALERSQSIPWDNFSSWISCICVVTFDLELGQVIEKVYPEHYTLTETEKSNICYLSFPDSNTGCMGDIQFHFRIR---SEKTP-RSISRHLDA----ALKKDFQHYYGCVSFRQVKDSTIKRGYFQKSLVVLSHLPFIDLYLYLAKIIAPEFFENGEVALETVCYQIDRWPCPYPGQSLHLPVMGEVIEVKVPINVSKIKPKPVKKTLPKEIQPSSFFHCG-YKAGLFHCFEKVLTHLHLLWELVLLSEPLVVMAPSPGICSASVQSLISLISPLPYVCDYRPYFTIHDSELKEYTGRTHTPPNIILGVTNPFFAKTLQMWPHILRIGEMPSLS--------MNKKNK-KSQESKPGVYTKYKPCLDRDKTLLKQLQKTNPNGSRPIEVQNAIVRNYMTELTQSFMIPLERYIGSLMPLQRSISPWRSPPKLRRFNIEEFIQTLPQYGPQLTSKMKGNWQALYRKFFSSPNFESWFEVKKKEVNQKLEILHLEALSTANLDQFLKSKDEVELVDLYTQMKLKIQKCRS--LHISSKVQHDIFLQTQKILAALPPDLQEMI 558
            +S     R+ + PW  FS+W+ C+CVVTFDLELGQ +E VYP  + LT+ EKS+ICYLSFPDS++GC+GD QF FR+R    +++P  +  RH ++    AL+++  HY+G V FRQVKDS++KRGYFQKSLV++S LPF+ L+  L  +IAPE+F+     LE VC +ID+WP P PGQ+L+LPVMG V++V++P  V K +  P K+   + + P+       ++  LF CF  VLTH+  LWEL+LL EPL+V+APSP + S  V +L S + PL + CD+RPYFTIHDSE KE+T RT  PPN++LGVTNPFF KTLQ WPHILR+GE P +S        + K ++ K+ ++KPG+YT Y   L RDK LLK+L K      RP +VQ+A++R ++ ELTQSF+IPLE Y+ SLMPLQ+SI+PW++PP+++ F+ ++F+++L   GPQLT  +KG+W  LYR+FF SP+F+ W+  + KE+  KLE LHLEA+  AN++ ++K K EVE+VDL  +++ K+ + +   L +         L  + ++ +LP DLQ ++
Sbjct:   22 TSSGRAARTPAAPWARFSAWLECVCVVTFDLELGQALELVYPNDFRLTDKEKSSICYLSFPDSHSGCLGDTQFSFRMRQCGGQRSPWHADDRHYNSRAPVALQREPAHYFGYVYFRQVKDSSVKRGYFQKSLVLVSRLPFVRLFQALLSLIAPEYFDKLAPCLEAVCSEIDQWPAPAPGQTLNLPVMGVVVQVRIPSRVDKSESSPPKQFDQENLLPAPVVLASVHELDLFRCFRPVLTHMQTLWELMLLGEPLLVLAPSPDVSSEMVLALTSCLQPLRFCCDFRPYFTIHDSEFKEFTTRTQAPPNVVLGVTNPFFIKTLQHWPHILRVGE-PKMSGDLPKQVKLKKPSRLKTLDTKPGLYTAYTAHLHRDKALLKRLLK-GVQKKRPSDVQSALLRRHLLELTQSFIIPLEHYMASLMPLQKSITPWKTPPQIQPFSQDDFLRSLEHAGPQLTCILKGDWLGLYRRFFKSPHFDGWYRQRHKEMALKLEALHLEAICEANIETWMKDKSEVEVVDLVLKLREKLVRAQGHQLPVKEATLQRAQLYIETVIGSLPKDLQAVL 582

The following BLAST results are available for this feature:

BLAST of TCONS_00013468-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00013468-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
DEN6B	0.000e+0	48.49	Protein DENND6B OS=Homo sapiens GN=DENND6B PE=2 SV...	[more]

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TCONS_00013468-protein (polypeptide) - C. hemisphaerica