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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00013468 ID=TCONS_00013468|Name=TCONS_00013468|organism=Clytia hemisphaerica|type=transcript|length=2367bp
CTGGTTTTCACTACATAAAGATTGAGAATGTAGTGTAGCTAGGTCCTTAA
AAGACTAAAAAACATACgcttcaaattcaaaatggcgtgaTTGTTATGAT
GCGAGACTTCACaacacaaaatatttttggacatTCCTTTGCTTCTGTCT
GGGTCACCAAGAGAGAGAAAACAGTAATTAAAAGTTACCTAACCACTGTA
AGATAGTTATGTGCTTCCCTAACAAGTAATTTGACCCTTCTTGGTCTGAT
GTTTCTTTCTATTTGGgaATGGCATCTGCATTCTCTGGCCATTCATCACA
AAGTTTTGACCACAGCTCGCATTCAGCTCTAGAAAGAAGTCAGTCCATTC
CATGGGATAatttttcatcatggatatccTGTATTTGTGTTGTTACTTTT
GATCTTGAGTTGGGACAAGTGATAGAGAAAGTTTATCCAGAGCACTACAC
ACTTACCGAAACTGAAAAGTCAAATATTTGTTATCTTTCCTTCCCTGATT
CAAATACAGGATGCATGGGAGATATTCAATTCCATTTTCGAATACGATCT
GAAAAAACACCAAGAAGTATTTCGAGGCATCTTGATGCAGccttaaagaa
agattttcaacATTATTATGGATGTGTCTCATTCAGACAAGTCAAAGATT
CAACCATCAAACGTggctattttcaaaaatcacttgTTGTTTTATCACAT
CTTCCATTTATTGATTTATACTTGTATCTAGCAAAAATTATTGctcctga
attttttgaaaatggtgaAGTTGCATTGGAAACAGTTTGCTATCAAATAG
ATCGCTGGCCGTGTCCTTACCCTGGTCAATCACTCCACCTGCCAGTCATG
GGAGAAGTCATTGAAGTCAAAGTTCCCATAAATGTCTCTAAGATAAAacc
taaaccagtcaaaaagACTTTACCAAAGGAAATTCAACCATCATCATTTT
TTCATTGTGGATATAAAGCCGgattatttcattgttttgagaaagtttta
ACACATTTGCACTTGCTTTGGGAATTAGTGTTATTATCTGAGCCCTTGGT
TGTAATGGCTCCTTCTCCAGGAATATGTTCAGCAAGTGTTCAATCACTCA
TTAGCTTGATAAGCCCACTACCATATGTTTGTGATTATCGTCCATACTTT
ACAATCCATGATAGTGAACTTAAAGAATATACTGGGCGCACTCATACGCC
GCCCAATATTATTTTGGGTGTAACGAATCcgttttttgccaaaactttGC
AAATGTGGCCACATATTTTAAGGATTGGTGAAATGCCCTCATTAAGCatg
aacaagaaaaataaaaagtctCAAGAATCAAAACCAGGAGTATACACCAA
ATATAAACCATGTTTGGATCGTGATAAAACTCTTTTGAAGCAACTTCAAA
AGACAAACCCTAATGGTTCAAGACCAATAGAAGTTCAAAATGCAATTGTA
CGAAACTATATGACTGAATTGACACAAAGTTTTATGATTCCTCTTGAGAG
GTATATCGGAAGTCTAATGCCCTTACAACGTAGTATATCACCTTGGAGAA
GCCCTCCTAAGCTTCGCAGGTTTAATATTGAAGAGTTCATTCAAACATTA
CCTCAGTACGGACCTCAATTAACATCAAAAATGAAAGGAAATTGGCAAGC
TTTGTatagaaaatttttctcttctcCAAATTTTGAATCTTGGTTTGAAG
TGAAGAAGAAGGAGGTCAATCAGAAGTTGGAGATTCTTCATTTAGAAGCA
TTATCAACAGCCAATCTTGATCAATTCCTAAAAAGTAAAGACGAAGTTGA
ATTGGTAGACCTTTATACTCAAATGAAACTAAAAATACAAAAGTGTAGAA
GCTTACATATCTCAAGTAAAGTACAGCATGATATTTTTCTGCAAACGCAA
AAGATACTTGCAGCTTTACCTCCAGATTTACAAGAAATGATTCGAAGAAG
TTAAAATTATATAGGGTTCAATATTCTAGTTTCTATCCCAATTTTAGTTT
TTGATATTAacctttttagtatttttatatATATCATATAATAGtttatt
aataatttttaatGGCATATTTGAAAGGGTTTGCAATGTAACAATTTTGT
ATCTTTCATTTGATTTCAATTTAGATAAGGTAAACTTGAGTTAAATCTAA
AGATCTACCTTTCGTTTATAAAAGAAACTTATAAAATTTAATCATTGGAT
CTTATATGAAATTGAATTCTGATCAaggggggggtgaagcagttagtaca
agacatcatgccaattagtaccgtggtggtgtgccatatgaattggataa
aatcacttagtactcagatgtactaactgcaaaaaagggtggtcccctgc
taaaaatttgccaaatt Run BLAST on NCBI protein sequence of TCONS_00013468-protein >TCONS_00013468-protein ID=TCONS_00013468-protein|Name=TCONS_00013468-protein|organism=Clytia hemisphaerica|type=polypeptide|length=561bp
MASAFSGHSSQSFDHSSHSALERSQSIPWDNFSSWISCICVVTFDLELGQ
VIEKVYPEHYTLTETEKSNICYLSFPDSNTGCMGDIQFHFRIRSEKTPRS
ISRHLDAALKKDFQHYYGCVSFRQVKDSTIKRGYFQKSLVVLSHLPFIDL
YLYLAKIIAPEFFENGEVALETVCYQIDRWPCPYPGQSLHLPVMGEVIEV
KVPINVSKIKPKPVKKTLPKEIQPSSFFHCGYKAGLFHCFEKVLTHLHLL
WELVLLSEPLVVMAPSPGICSASVQSLISLISPLPYVCDYRPYFTIHDSE
LKEYTGRTHTPPNIILGVTNPFFAKTLQMWPHILRIGEMPSLSMNKKNKK
SQESKPGVYTKYKPCLDRDKTLLKQLQKTNPNGSRPIEVQNAIVRNYMTE
LTQSFMIPLERYIGSLMPLQRSISPWRSPPKLRRFNIEEFIQTLPQYGPQ
LTSKMKGNWQALYRKFFSSPNFESWFEVKKKEVNQKLEILHLEALSTANL
DQFLKSKDEVELVDLYTQMKLKIQKCRSLHISSKVQHDIFLQTQKILAAL
PPDLQEMIRRS Run BLAST on NCBI transcript from alignment at sc0000168:351494..358379+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00013468 ID=TCONS_00013468|Name=TCONS_00013468|organism=Clytia hemisphaerica|type=transcript|length=6886bp|location=Sequence derived from alignment at sc0000168:351494..358379+ (Clytia hemisphaerica)
CTGGTTTTCACTACATAAAGATTGAGAATGTAGTGTAGCTAGGTCCTTAA
AAGACTAAAAAACATACgcttcaaattcaaaatggcgtgaTTGTTATGAT
GCGAGACTTCACaacacaaaatatttttggacatTCCTTTGCTTCTGTCT
GGGTCACCAAGAGAGAGAAAACAGTAATTAAAAGTTACCTAACCACTGTA
AGATAGTTATGTGCTTCCCTAACAAGTAATTTGACCCTTCTTGGTCTGAT
GTTTCTTTCTATTTGGGTAAGATTACATTTGtgtagttttttcattttgt
atatTTTAGATCTTTCTTGTTGGCCATGCTCTGCTGCTGCTTAGTCCTTT
GTTgctagcgactccagaagtcacgcAACTTTGGTTGAcatcaaaccaaa
tgtttcatttttccgtgaactttgaccccttctttgaactttttttctat
gtatggcGCCCATTgaaccagacgtaattaatcgaacgaacagttcgatt
accgaactaatcgaactttgactttgtcgaacttaatcgaacgacaaaat
tttgattaaattctttaatcgaacttttcaaaagtcgctaaaattgtgag
tattcgattaagttcgacaaagttcgacaacgggaaatgttcgacaaatt
cgacaaaaaactccgtTCGAAAAAGTTAGAcaacaaaaaatgacctcctt
tggctactaccgtggacggcccctggTGGTCCTGGCCGAGGTCCCGGGGG
TCCGATCGGggcccactggtcagggggatgtgagggtacacgtctgcacc
gttgggggtgcttcaaagttccacgaccctgcctatgccccggacagtcc
ggggtttttttgatgcgtgcccggggtccgtattatttgtttttgagaga
ctaccccggacgccccagacagcccgcgcggtcgctttttatagaatcgc
tgaccgcgcgagcttttttctaattcattgaaatacgtctggggtaaatt
tatggtgcaaaaattggagccccggacatacgtccggggaaaaagttatt
tttttcagaccccagacatttgccccggactgtccggggcataggcaggg
ttgTAAAGTTCCGTCAAAGGCCGGCAAAAAGTGTGATCGAATTACGCGTA
AGTGGAGCGGCCTTCAGTTGCTCGGGtttactcaaatttttgtttgatta
aacttgaaaaagttcgattaagttcgattagttcgattaagttcgattaa
tgtaatcaaaataatcgaactgtcgaggtctctttaaaaaaagttcgatt
aagttcaatttcagtaatcgaacttaatcgaactttgtattttgagaaat
ttgtgagtattcgattaaagttcgacaaccgaacttagtcgaacattaat
cggccaacaaagttcgattaagttcgacaaagttcgatcaaaaataccgt
tcgattggttcaattaattacgtctggattgaaaaattgttctattggCG
CCACCCCACCACCCGCCCTCGCATCATATTTTCCCCTAATTTTCTGGTTA
GGCTGGTGCAGAGATGCGggaaaaaatcaggaaaaagcaaattgttcttt
tgacatttagcttttttcttttttcatcagaAAATTGTTCTGTTTGTGTC
ACAAACTGCCCCTGCTGACATGACTTACAGAAGCAATTTAAAAAAACCCG
TGAATTTTTCCGACCGCCTGTCCGCCCGCctgtccgcccgcatgcatttt
taacacctgttgcgatgcaaacagaaaattttttcgatcGCCGCTTATTC
TAAAgtgttccggtttttactaaaagaaagcccatgatcttagctttcca
gcggtatataacactcatgtgcgtttgcgtagggcggcaatcaaaaataa
taTTGCGTTTGGGTCGACCGACCGactgtttatttacaagaaaatgCGAT
TCGGAAAGTCAGTAAAATCGTCGGGTTTTCTTGGGCCCTGTTCGCAGGTT
CAGATCTTTCCCATTATGGCGGACACTGGCGAACGAAGCATGTctttgaa
taattattttttgtttaactTAGCCCACATTGAGTCCtgttcaagttttt
tcatgtacccttattgaaattgtCATGTCAAAAGTTAGCAAcgcggtagg
gccaatacccTGGGGGCCGAAAATAAGGGCTGCTTTAAGGTTAACACATG
CGCGCAcacatttagtttggcaaattaaagatgacggcataagattctgt
tgattgTCGACTTGATTCATCAGGATTCACTAGATCGtaaaaatccgaca
aaatttaccaccgaccgaccgactggatttgaaaatgttttaggacccga
atggaacatatttttgattgccgtcTAGGGTAGATTttgagttacaggaa
ttaattccttgtttgttttgatctgaaattttcaataGGGATGGCCAACA
TGGTTCTCTTGCTCCTATCAGGGGGGCttgagacgggggtaagagaatta
aagtttctaagtaaaatcttaattatcacccaaaaaagtgcctttttttg
tccatatctcttaaatagatagtcccagccttatccctccttcagtaaag
cttcctatataTACCTTTtatccttcagaaaaaccaaaaatattggcctt
aattgcttacttttagttcctgtagccagtagtgtgaccccctgtatttc
tattttattccgTGCGGGTTTTTCAATTGAGATGTCAATTGGGAAATTTG
TCACCCGGCGGGATCGAACTCCGAAGCCCATGCTTGTGAGATAGACGctc
taaccgcttgagctaaccacgcttggagACTTGGAGGGAAAGCGCGAACT
tacgagaaagaaaaaggaaagaaagaaacgagaagaaaattagttcccgc
tttgatgttattatcgaaacaaaaggatcagtcacgcagacattcctttc
cacacgtcagcaatctagtttttataaatatggatatttagatattttgc
ctgcagtGCTACTTTTTTTACCTCGCTTCGCTCGAAAAATAGCGAAGCTC
CttaaatttataatttgaaCCCTGATAAGGCTGCTTCCGGTAGAGCACTG
TTCCATTGTTCTTGACAATCATTTTCAGCTTATTTGATATGTTAAAGACT
GTgattataatttaaaaaatggaaaaaggaaaatgaaagaaataagCTGA
AAAAGGGGAAATATCTACTCGCAAAAATCTATCAACTTAAGGTACAAAAG
CCACAAAACCAatcctacattctgggggttattaCAAAAATAGAAGTCGA
CTTCAAGGACAAAAAAAAAGGCTATCtttcaaaagtaatgaaatgaaccc
ctgggaaaggattttgagAGTTCAAACGTTGAAAACGATCAATGTTTTTT
AATGTGCAAATCTACATttttcaggtctgattcaaatttgaCCCTACATT
CTCAGGGTCAGGTGCTGTAGTAGTATTCTTACAGACATTGAGTCTTGGGA
GAATTTACTTTTAACAAACACTGGGATATTTTGCATGTAAATCTTTCATG
AATGTTTGTATGTTTGAGTTTCCTACTGTGGAGTGCAAGAGATCTATGAC
TGAGTGATTCTTCTCGATTGCCACATAATTTGCAGCAACTCATTTACACA
TAATATCTTATTCAATGTACCATATGTTTTTGCTGATGTTATTTGCCCAA
GAATCATCCAGGCTTGATAAggctttgaaataaaaataacaaaaaacatG
AGTAGtcctatttttcttcttttaggaATGGCATCTGCATTCTCTGGCCA
TTCATCACAAAGTTTTGACCACAGCTCGCATTCAGCTCTAGAAAGAAGTC
AGTCCATTCCATGGGATAatttttcatcatggatatccTGTATTTGTGTT
GTTACTTTTGATCTTGAGTTGGGACAAGTGATAGAGAAAGTTTATCCAGA
GCACTACACACTTACCGAAACTGAAAAGTCAAATATTTGTTATCTTTCCT
TCCCTGATTCAAATACAGGATGCATGGGAGATATTCAATTCCATTTTCGA
ATACGATCTGAAAAAACACCAAGAAGTATTTCGAGGCATCTTGATGCAGC
CTTGAAGAAAGATTTTCAACATTACTATGGATGTGTCTCATTCAGACAAG
TCAAAGATTCAACCATCAAACGTggctattttcaaaaatcacttgTTGTT
TTATCACATCTTCCATTTATTGATTTATACTTGTATCTAGCAAAAATTAT
TGctcctgaattttttgaaaatggtgaAGTTGCATTGGAAACAGTTTGCT
ATCAAATAGATCGCTGGCCGTGTCCTTACCCTGGTCAATCACTCCACCTG
CCAGTCATGGGAGAAGTCATTGAAGTCAAAGTTCCCATAAATGTCTCTAA
GATAAAacctaaaccagtcaaaaagACTTTACCAAAGGAAATTCAACCAT
CATCATTTTTTCATTGTGGATATAAAGCCGgattatttcattgttttgag
aaagttttaACACATTTGCACTTGCTTTGGGAATTAGTGTTATTATCTGA
GCCCTTGGTTGTAATGGCTCCTTCTCCAGGAATATGTTCAGCAAGTGTTC
AATCACTCATTAGCTTGATAAGCCCACTACCATATGTTTGTGATTATCGT
CCATACTTTACAATCCATGATAGTGAACTTAAAGAATATACTGGGCGCAC
TCATACGCCGCCCAATATTATCTTGGGTGTAACGAAtccattttttgcca
aaactttGCAAATGTGGCCACATATTTTAAGGATTGGTGAAATGCCTTCA
TTAAGCatgaacaagaaaaataaaaagtctCAAGAATCAAAACCAGGAGT
ATACACTAAATATAAACCATGTTTGGATCGTGATAAAACTCTTTTGAAGC
AACTTCAAAAGACAAACCCTAATGGTTCAAGACCAATAGAAGTTCAAAAT
GCGATTGTACGAAACTATATGACTGAATTAACACAAAGTTTTATGATTCC
TCTTGAGAGGTATATCGGAAGTCTAATGCCCTTACAACGTAGTATATCAC
CTTGGAGAAGCCCTCCTAAGCTNCAACACCAAGAAGTATTTCGAGGCATC
TTGATGCAGccttaaagaaagattttcaacATTATTATGGATGTGTCTCA
TTCAGACAAGTCAAAGATTCAACCATCAAACGTggctattttcaaaaatc
acttgTTGTTTTATCACATCTTCCATTTATTGATTTATACTTGTATCTAG
CAAAAATTATTGctcctgaattttttgaaaatggtgaAGTTGCATTGGAA
ACAGTTTGCTATCAAATAGATCGCTGGCCGTGTCCTTACCCTGGTCAATC
ACTCCACCTGCCAGTCATGGGAGAAGTCATTGAAGTCAAAGTTCCCATAA
ATGTCTCTAAGATAAAacctaaaccagtcaaaaagACTTTACCAAAGGAA
ATTCAACCATCATCATTTTTTCATTGTGGATATAAAGCCGgattatttca
ttgttttgagaaagttttaACACATTTGCACTTGCTTTGGGAATTAGTGT
TATTATCTGAGCCCTTGGTTGTAATGGCTCCTTCTCCAGGAATATGTTCA
GCAAGTGTTCAATCACTCATTAGCTTGATAAGCCCACTACCATATGTTTG
TGATTATCGTCCATACTTTACAATCCATGATAGTGAACTTAAAGAATATA
CTGGGCGCACTCATACGCCGCCCAATATTATTTTGGGTGTAACGAATCcg
ttttttgccaaaactttGCAAATGTGGCCACATATTTTAAGGATTGGTGA
AATGCCCTCATTAAGCatgaacaagaaaaataaaaagtctCAAGAATCAA
AACCAGGAGTATACACCAAATATAAACCATGTTTGGATCGTGATAAAACT
CTTTTGAAGCAACTTCAAAAGACAAACCCTAATGGTTCAAGACCAATAGA
AGTTCAAAATGCAATTGTACGAAACTATATGACTGAATTGACACAAAGTT
TTATGATTCCTCTTGAGAGGTATATCGGAAGTCTAATGCCCTTACAACGT
AGTATATCACCTTGGAGAAGCCCTCCTAAGCTTCGCAGGTTTAATATTGA
AGAGTTCATTCAAACATTACCTCAGTACGGACCTCAATTAACATCAAAAA
TGAAAGGAAATTGGCAAGCTTTGTatagaaaatttttctcttctcCAAAT
TTTGAATCTTGGTTTGAAGTGAAGAAGAAGGAGGTCAATCAGAAGTTGGA
GATTCTTCATTTAGAAGCATTATCAACAGCCAATCTTGATCAATTCCTAA
AAAGTAAAGACGAAGTTGAATTGGTAGACCTTTATACTCAAATGAAACTA
AAAATACAAAAGTGTAGAAGCTTACATATCTCAAGTAAAGTACAGCATGA
TATTTTTCTGCAAACGCAAAAGATACTTGCAGCTTTACCTCCAGATTTAC
AAGAAATGATTCGAAGAAGTTAAAATTATATAGGGTTCAATATTCTAGTT
TCTATCCCAATTTTAGTTTTTGATATTAacctttttagtatttttatatA
TATCATATAATAGtttattaataatttttaatGGCATATTTGAAAGGGTT
TGCAATGTAACAATTTTGTATCTTTCATTTGATTTCAATTTAGATAAGGT
AAACTTGAGTTAAATCTAAAGATCTACCTTTCGTTTATAAAAGAAACTTA
TAAAATTTAATCATTGGATCTTATATGAAATTGAATTCTGATCAaggggg
gggtgaagcagttagtacaagacatcatgccaattagtaccgtggtggtg
tgccatatgaattggataaaatcacttagtactcagatgtactaactgca
aaaaagggtggtcccctgctaaaaatttgccaaatt Coding sequence (CDS) from alignment at sc0000168:351494..358379+ >TCONS_00013468 ID=TCONS_00013468|Name=TCONS_00013468|organism=Clytia hemisphaerica|type=CDS|length=3372bp|location=Sequence derived from alignment at sc0000168:351494..358379+ (Clytia hemisphaerica)
ATGGCATCTGCATTCTCTGGCCATTCATCACAAAGTTTTGACCACAGCTC
GCATTCAGCTCTAGAAAGAAGTCAGTCCATTCCATGGGATAatttttcat
catggatatccTGTATTTGTGTTGTTACTTTTGATCTTGAGTTGGGACAA
GTGATAGAGAAAGTTTATCCAGAGCACTACACACTTACCGAAACTGAAAA
GTCAAATATTTGTTATCTTTCCTTCCCTGATTCAAATACAGGATGCATGG
GAGATATTCAATTCCATTTTCGAATACGATCTGAAAAAACACCAAGAAGT
ATTTCGAGGCATCTTGATGCAGccttaaagaaagattttcaacATTATTA
TGGATGTGTCTCATTCAGACAAGTCAAAGATTCAACCATCAAACGTggct
attttcaaaaatcacttgTTGTTTTATCACATCTTCCATTTATTGATTTA
TACTTGTATCTAGCAAAAATTATTGctcctgaattttttgaaaatggtga
AGTTGCATTGGAAACAGTTTGCTATCAAATAGATCGCTGGCCGTGTCCTT
ACCCTGGTCAATCACTCCACCTGCCAGTCATGGGAGAAGTCATTGAAGTC
AAAGTTCCCATAAATGTCTCTAAGATAAAacctaaaccagtcaaaaagAC
TTTACCAAAGGAAATTCAACCATCATCATTTTTTCATTGTGGATATAAAG
CCGgattatttcattgttttgagaaagttttaACACATTTGCACTTGCTT
TGGGAATTAGTGTTATTATCTGAGCCCTTGGTTGTAATGGCTCCTTCTCC
AGGAATATGTTCAGCAAGTGTTCAATCACTCATTAGCTTGATAAGCCCAC
TACCATATGTTTGTGATTATCGTCCATACTTTACAATCCATGATAGTGAA
CTTAAAGAATATACTGGGCGCACTCATACGCCGCCCAATATTATTTTGGG
TGTAACGAATCcgttttttgccaaaactttGCAAATGTGGCCACATATTT
TAAGGATTGGTGAAATGCCCTCATTAAGCatgaacaagaaaaataaaaag
tctCAAGAATCAAAACCAGGAGTATACACCAAATATAAACCATGTTTGGA
TCGTGATAAAACTCTTTTGAAGCAACTTCAAAAGACAAACCCTAATGGTT
CAAGACCAATAGAAGTTCAAAATGCAATTGTACGAAACTATATGACTGAA
TTGACACAAAGTTTTATGATTCCTCTTGAGAGGTATATCGGAAGTCTAAT
GCCCTTACAACGTAGTATATCACCTTGGAGAAGCCCTCCTAAGCTTCGCA
GGTTTAATATTGAAGAGTTCATTCAAACATTACCTCAGTACGGACCTCAA
TTAACATCAAAAATGAAAGGAAATTGGCAAGCTTTGTatagaaaattttt
ctcttctcCAAATTTTGAATCTTGGTTTGAAGTGAAGAAGAAGGAGGTCA
ATCAGAAGTTGGAGATTCTTCATTTAGAAGCATTATCAACAGCCAATCTT
GATCAATTCCTAAAAAGTAAAGACGAAGTTGAATTGGTAGACCTTTATAC
TCAAATGAAACTAAAAATACAAAAGTGTAGAAGCTTACATATCTCAAGTA
AAGTACAGCATGATATTTTTCTGCAAACGCAAAAGATACTTGCAGCTTTA
CCTCCAGATTTACAAGAAATGATTCGAAGAAGTTAAATGGCATCTGCATT
CTCTGGCCATTCATCACAAAGTTTTGACCACAGCTCGCATTCAGCTCTAG
AAAGAAGTCAGTCCATTCCATGGGATAatttttcatcatggatatccTGT
ATTTGTGTTGTTACTTTTGATCTTGAGTTGGGACAAGTGATAGAGAAAGT
TTATCCAGAGCACTACACACTTACCGAAACTGAAAAGTCAAATATTTGTT
ATCTTTCCTTCCCTGATTCAAATACAGGATGCATGGGAGATATTCAATTC
CATTTTCGAATACGATCTGAAAAAACACCAAGAAGTATTTCGAGGCATCT
TGATGCAGccttaaagaaagattttcaacATTATTATGGATGTGTCTCAT
TCAGACAAGTCAAAGATTCAACCATCAAACGTggctattttcaaaaatca
cttgTTGTTTTATCACATCTTCCATTTATTGATTTATACTTGTATCTAGC
AAAAATTATTGctcctgaattttttgaaaatggtgaAGTTGCATTGGAAA
CAGTTTGCTATCAAATAGATCGCTGGCCGTGTCCTTACCCTGGTCAATCA
CTCCACCTGCCAGTCATGGGAGAAGTCATTGAAGTCAAAGTTCCCATAAA
TGTCTCTAAGATAAAacctaaaccagtcaaaaagACTTTACCAAAGGAAA
TTCAACCATCATCATTTTTTCATTGTGGATATAAAGCCGgattatttcat
tgttttgagaaagttttaACACATTTGCACTTGCTTTGGGAATTAGTGTT
ATTATCTGAGCCCTTGGTTGTAATGGCTCCTTCTCCAGGAATATGTTCAG
CAAGTGTTCAATCACTCATTAGCTTGATAAGCCCACTACCATATGTTTGT
GATTATCGTCCATACTTTACAATCCATGATAGTGAACTTAAAGAATATAC
TGGGCGCACTCATACGCCGCCCAATATTATTTTGGGTGTAACGAATCcgt
tttttgccaaaactttGCAAATGTGGCCACATATTTTAAGGATTGGTGAA
ATGCCCTCATTAAGCatgaacaagaaaaataaaaagtctCAAGAATCAAA
ACCAGGAGTATACACCAAATATAAACCATGTTTGGATCGTGATAAAACTC
TTTTGAAGCAACTTCAAAAGACAAACCCTAATGGTTCAAGACCAATAGAA
GTTCAAAATGCAATTGTACGAAACTATATGACTGAATTGACACAAAGTTT
TATGATTCCTCTTGAGAGGTATATCGGAAGTCTAATGCCCTTACAACGTA
GTATATCACCTTGGAGAAGCCCTCCTAAGCTTCGCAGGTTTAATATTGAA
GAGTTCATTCAAACATTACCTCAGTACGGACCTCAATTAACATCAAAAAT
GAAAGGAAATTGGCAAGCTTTGTatagaaaatttttctcttctcCAAATT
TTGAATCTTGGTTTGAAGTGAAGAAGAAGGAGGTCAATCAGAAGTTGGAG
ATTCTTCATTTAGAAGCATTATCAACAGCCAATCTTGATCAATTCCTAAA
AAGTAAAGACGAAGTTGAATTGGTAGACCTTTATACTCAAATGAAACTAA
AAATACAAAAGTGTAGAAGCTTACATATCTCAAGTAAAGTACAGCATGAT
ATTTTTCTGCAAACGCAAAAGATACTTGCAGCTTTACCTCCAGATTTACA
AGAAATGATTCGAAGAAGTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00013468-exon-sc0000168-1491911889:351494..351759 | TCONS_00013468-exon-sc0000168-1491911889:351494..351759 | Clytia hemisphaerica | exon |
| TCONS_00013468-exon-sc0000168-1510915933:351494..351759 | TCONS_00013468-exon-sc0000168-1510915933:351494..351759 | Clytia hemisphaerica | exon |
| TCONS_00013468-exon-sc0000168-1575043694:351494..351759 | TCONS_00013468-exon-sc0000168-1575043694:351494..351759 | Clytia hemisphaerica | exon |
| TCONS_00013468-exon-sc0000168-1491911889:355269..355578 | TCONS_00013468-exon-sc0000168-1491911889:355269..355578 | Clytia hemisphaerica | exon |
| TCONS_00013468-exon-sc0000168-1510915933:355269..355578 | TCONS_00013468-exon-sc0000168-1510915933:355269..355578 | Clytia hemisphaerica | exon |
| TCONS_00013468-exon-sc0000168-1575043694:355269..355578 | TCONS_00013468-exon-sc0000168-1575043694:355269..355578 | Clytia hemisphaerica | exon |
| TCONS_00013468-exon-sc0000168-1491911889:356589..358379 | TCONS_00013468-exon-sc0000168-1491911889:356589..358379 | Clytia hemisphaerica | exon |
| TCONS_00013468-exon-sc0000168-1510915933:356589..358379 | TCONS_00013468-exon-sc0000168-1510915933:356589..358379 | Clytia hemisphaerica | exon |
| TCONS_00013468-exon-sc0000168-1575043694:356589..358379 | TCONS_00013468-exon-sc0000168-1575043694:356589..358379 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000168 | supercontig | sc0000168:351494..358379 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR018307 | ABL9/DENND6_dom |
Blast
BLAST of TCONS_00013468 vs. Swiss-Prot (Human)
Match: DEN6A (Protein DENND6A OS=Homo sapiens GN=DENND6A PE=1 SV=1) HSP 1 Score: 520.005 bits (1338), Expect = 1.133e-174 Identity = 287/553 (51.90%), Postives = 379/553 (68.54%), Query Frame = 2
Query: 353 WDNFSSWISCICVVTFDLELGQVIEKVYPEHYTLTETEKSNICYLSFPDSNTGCMGDIQFHFRIRSEKTPRSISRH---------LDAALKKDFQHYYGCVSFRQVKDSTIKRGYFQKSLVVLSHLPFIDLYLYLAKIIAPEFFENGEVALETVCYQIDRWPCPYPGQSLHLPVMGEVIEVKVPINVSK-IKPKPVKKTLPKEIQPSSFFHCGYKAGLFHCFEKXXXXXXXXXXXXXXXXXXXXMAPSPGICSASVQSLISLISPLPYVCDYRPYFTIHDSELKEYTGRTHTPPNIILGVTNPFFAKTLQMWPHILRIGEM-PSLSMNKKNKK-------SQESKPGVYTKYKPCLDRDKTLLKQLQKTNPNGSRPIEVQNAIVRNYMTELTQSFMIPLERYIGSLMPLQRSISPWRSPPKLRRFNIEEFIQTLPQYGPQLTSKMKGNWQALYRKFFSSPNFESWFEVKKKEVNQKLEILHLEALSTANLDQFLKSKDEVELVDLYTQMKLKIQKCRSLHISSK--VQHDIFLQTQKILAALPPDLQEMIRRS 1951
WD+FS+W+ C+CVV FDLELGQ +E +YP+H LT+ EK+NICYLSFPDSN+GC+GD QF FR R + + R +S H L LKKD ++YG V FRQV+D T+KRGYFQKSLV++S LP+I + + K IAPE+FE E LE C +DRWP P PG++LHLP+MG V++V++P K + V+ T + S ++ +F CF V H +LWELVLL EPLVVMAPSP S +V +L++ ISPL Y D+RPYFTIHDSE KEYT RT PP++ILGVTNPFFAKTLQ WPHI+RIG++ P+ + K+ K + +SKPGVYT YKP L+RD+ ++KQLQK RP E Q+ I+R Y ELTQSF+IPLERY+ SLMPLQ+SISPW+SPP+LR+F EEF++TL + GPQLTS++KG+W LYR F SPNF+ WF+ ++KE+ QKLE LHLEAL +L +++ EVE VDL ++K K+ + H+ K + I+ ALP DLQ ++ ++
Sbjct: 55 WDSFSAWLHCVCVVGFDLELGQAVEVIYPQHSKLTDREKTNICYLSFPDSNSGCLGDTQFCFRFR-QSSGRRVSLHCLLDQFDKDLPVYLKKDPAYFYGYVYFRQVRDKTLKRGYFQKSLVLISKLPYIHFFHTVLKQIAPEYFEKNEPYLEAACNDVDRWPAPVPGKTLHLPIMGVVMKVRIPTCHDKPGTTQIVQLTQQVDTNISVILPTVHEVDIFRCFCPVFLHSQMLWELVLLGEPLVVMAPSPSESSETVLALVNCISPLKYFSDFRPYFTIHDSEFKEYTTRTQAPPSVILGVTNPFFAKTLQHWPHIIRIGDLKPTGEIPKQVKVKKLKNLKTLDSKPGVYTSYKPYLNRDEEIIKQLQK-GVQQKRPSEAQSVILRRYFLELTQSFIIPLERYVASLMPLQKSISPWKSPPQLRQFLPEEFMKTLEKTGPQLTSRIKGDWIGLYRHFLKSPNFDGWFKTRRKEMTQKLEALHLEALCEEDLLLWIQKHTEVETVDLVLKLKNKLLQADREHLPVKPDTMEKLRTHIDAIILALPEDLQGILLKT 605
The following BLAST results are available for this feature:
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