XLOC_007526 (gene) - C. hemisphaerica

Overview
NameXLOC_007526
Unique NameXLOC_007526
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000168:351462..358379+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007526 ID=XLOC_007526|Name=XLOC_007526|organism=Clytia hemisphaerica|type=gene|length=6918bp|location=Sequence derived from alignment at sc0000168:351462..358379+ (Clytia hemisphaerica)
gaaagtgtttTTTTCGCGCGCTAATTTATGACCTGGTTTTCACTACATAA AGATTGAGAATGTAGTGTAGCTAGGTCCTTAAAAGACTAAAAAACATACg cttcaaattcaaaatggcgtgaTTGTTATGATGCGAGACTTCACaacaca aaatatttttggacatTCCTTTGCTTCTGTCTGGGTCACCAAGAGAGAGA AAACAGTAATTAAAAGTTACCTAACCACTGTAAGATAGTTATGTGCTTCC CTAACAAGTAATTTGACCCTTCTTGGTCTGATGTTTCTTTCTATTTGGGT AAGATTACATTTGtgtagttttttcattttgtatatTTTAGATCTTTCTT GTTGGCCATGCTCTGCTGCTGCTTAGTCCTTTGTTgctagcgactccaga agtcacgcAACTTTGGTTGAcatcaaaccaaatgtttcatttttccgtga actttgaccccttctttgaactttttttctatgtatggcGCCCATTgaac cagacgtaattaatcgaacgaacagttcgattaccgaactaatcgaactt tgactttgtcgaacttaatcgaacgacaaaattttgattaaattctttaa tcgaacttttcaaaagtcgctaaaattgtgagtattcgattaagttcgac aaagttcgacaacgggaaatgttcgacaaattcgacaaaaaactccgtTC GAAAAAGTTAGAcaacaaaaaatgacctcctttggctactaccgtggacg gcccctggTGGTCCTGGCCGAGGTCCCGGGGGTCCGATCGGggcccactg gtcagggggatgtgagggtacacgtctgcaccgttgggggtgcttcaaag ttccacgaccctgcctatgccccggacagtccggggtttttttgatgcgt gcccggggtccgtattatttgtttttgagagactaccccggacgccccag acagcccgcgcggtcgctttttatagaatcgctgaccgcgcgagcttttt tctaattcattgaaatacgtctggggtaaatttatggtgcaaaaattgga gccccggacatacgtccggggaaaaagttatttttttcagaccccagaca tttgccccggactgtccggggcataggcagggttgTAAAGTTCCGTCAAA GGCCGGCAAAAAGTGTGATCGAATTACGCGTAAGTGGAGCGGCCTTCAGT TGCTCGGGtttactcaaatttttgtttgattaaacttgaaaaagttcgat taagttcgattagttcgattaagttcgattaatgtaatcaaaataatcga actgtcgaggtctctttaaaaaaagttcgattaagttcaatttcagtaat cgaacttaatcgaactttgtattttgagaaatttgtgagtattcgattaa agttcgacaaccgaacttagtcgaacattaatcggccaacaaagttcgat taagttcgacaaagttcgatcaaaaataccgttcgattggttcaattaat tacgtctggattgaaaaattgttctattggCGCCACCCCACCACCCGCCC TCGCATCATATTTTCCCCTAATTTTCTGGTTAGGCTGGTGCAGAGATGCG ggaaaaaatcaggaaaaagcaaattgttcttttgacatttagcttttttc ttttttcatcagaAAATTGTTCTGTTTGTGTCACAAACTGCCCCTGCTGA CATGACTTACAGAAGCAATTTAAAAAAACCCGTGAATTTTTCCGACCGCC TGTCCGCCCGCctgtccgcccgcatgcatttttaacacctgttgcgatgc aaacagaaaattttttcgatcGCCGCTTATTCTAAAgtgttccggttttt actaaaagaaagcccatgatcttagctttccagcggtatataacactcat gtgcgtttgcgtagggcggcaatcaaaaataataTTGCGTTTGGGTCGAC CGACCGactgtttatttacaagaaaatgCGATTCGGAAAGTCAGTAAAAT CGTCGGGTTTTCTTGGGCCCTGTTCGCAGGTTCAGATCTTTCCCATTATG GCGGACACTGGCGAACGAAGCATGTctttgaataattattttttgtttaa ctTAGCCCACATTGAGTCCtgttcaagttttttcatgtacccttattgaa attgtCATGTCAAAAGTTAGCAAcgcggtagggccaatacccTGGGGGCC GAAAATAAGGGCTGCTTTAAGGTTAACACATGCGCGCAcacatttagttt ggcaaattaaagatgacggcataagattctgttgattgTCGACTTGATTC ATCAGGATTCACTAGATCGtaaaaatccgacaaaatttaccaccgaccga ccgactggatttgaaaatgttttaggacccgaatggaacatatttttgat tgccgtcTAGGGTAGATTttgagttacaggaattaattccttgtttgttt tgatctgaaattttcaataGGGATGGCCAACATGGTTCTCTTGCTCCTAT CAGGGGGGCttgagacgggggtaagagaattaaagtttctaagtaaaatc ttaattatcacccaaaaaagtgcctttttttgtccatatctcttaaatag atagtcccagccttatccctccttcagtaaagcttcctatataTACCTTT tatccttcagaaaaaccaaaaatattggccttaattgcttacttttagtt cctgtagccagtagtgtgaccccctgtatttctattttattccgTGCGGG TTTTTCAATTGAGATGTCAATTGGGAAATTTGTCACCCGGCGGGATCGAA CTCCGAAGCCCATGCTTGTGAGATAGACGctctaaccgcttgagctaacc acgcttggagACTTGGAGGGAAAGCGCGAACTtacgagaaagaaaaagga aagaaagaaacgagaagaaaattagttcccgctttgatgttattatcgaa acaaaaggatcagtcacgcagacattcctttccacacgtcagcaatctag tttttataaatatggatatttagatattttgcctgcagtGCTACTTTTTT TACCTCGCTTCGCTCGAAAAATAGCGAAGCTCCttaaatttataatttga aCCCTGATAAGGCTGCTTCCGGTAGAGCACTGTTCCATTGTTCTTGACAA TCATTTTCAGCTTATTTGATATGTTAAAGACTGTgattataatttaaaaa atggaaaaaggaaaatgaaagaaataagCTGAAAAAGGGGAAATATCTAC TCGCAAAAATCTATCAACTTAAGGTACAAAAGCCACAAAACCAatcctac attctgggggttattaCAAAAATAGAAGTCGACTTCAAGGACAAAAAAAA AGGCTATCtttcaaaagtaatgaaatgaacccctgggaaaggattttgag AGTTCAAACGTTGAAAACGATCAATGTTTTTTAATGTGCAAATCTACATt tttcaggtctgattcaaatttgaCCCTACATTCTCAGGGTCAGGTGCTGT AGTAGTATTCTTACAGACATTGAGTCTTGGGAGAATTTACTTTTAACAAA CACTGGGATATTTTGCATGTAAATCTTTCATGAATGTTTGTATGTTTGAG TTTCCTACTGTGGAGTGCAAGAGATCTATGACTGAGTGATTCTTCTCGAT TGCCACATAATTTGCAGCAACTCATTTACACATAATATCTTATTCAATGT ACCATATGTTTTTGCTGATGTTATTTGCCCAAGAATCATCCAGGCTTGAT AAggctttgaaataaaaataacaaaaaacatGAGTAGtcctatttttctt cttttaggaATGGCATCTGCATTCTCTGGCCATTCATCACAAAGTTTTGA CCACAGCTCGCATTCAGCTCTAGAAAGAAGTCAGTCCATTCCATGGGATA atttttcatcatggatatccTGTATTTGTGTTGTTACTTTTGATCTTGAG TTGGGACAAGTGATAGAGAAAGTTTATCCAGAGCACTACACACTTACCGA AACTGAAAAGTCAAATATTTGTTATCTTTCCTTCCCTGATTCAAATACAG GATGCATGGGAGATATTCAATTCCATTTTCGAATACGATCTGAAAAAACA CCAAGAAGTATTTCGAGGCATCTTGATGCAGCCTTGAAGAAAGATTTTCA ACATTACTATGGATGTGTCTCATTCAGACAAGTCAAAGATTCAACCATCA AACGTggctattttcaaaaatcacttgTTGTTTTATCACATCTTCCATTT ATTGATTTATACTTGTATCTAGCAAAAATTATTGctcctgaattttttga aaatggtgaAGTTGCATTGGAAACAGTTTGCTATCAAATAGATCGCTGGC CGTGTCCTTACCCTGGTCAATCACTCCACCTGCCAGTCATGGGAGAAGTC ATTGAAGTCAAAGTTCCCATAAATGTCTCTAAGATAAAacctaaaccagt caaaaagACTTTACCAAAGGAAATTCAACCATCATCATTTTTTCATTGTG GATATAAAGCCGgattatttcattgttttgagaaagttttaACACATTTG CACTTGCTTTGGGAATTAGTGTTATTATCTGAGCCCTTGGTTGTAATGGC TCCTTCTCCAGGAATATGTTCAGCAAGTGTTCAATCACTCATTAGCTTGA TAAGCCCACTACCATATGTTTGTGATTATCGTCCATACTTTACAATCCAT GATAGTGAACTTAAAGAATATACTGGGCGCACTCATACGCCGCCCAATAT TATCTTGGGTGTAACGAAtccattttttgccaaaactttGCAAATGTGGC CACATATTTTAAGGATTGGTGAAATGCCTTCATTAAGCatgaacaagaaa aataaaaagtctCAAGAATCAAAACCAGGAGTATACACTAAATATAAACC ATGTTTGGATCGTGATAAAACTCTTTTGAAGCAACTTCAAAAGACAAACC CTAATGGTTCAAGACCAATAGAAGTTCAAAATGCGATTGTACGAAACTAT ATGACTGAATTAACACAAAGTTTTATGATTCCTCTTGAGAGGTATATCGG AAGTCTAATGCCCTTACAACGTAGTATATCACCTTGGAGAAGCCCTCCTA AGCTNCAACACCAAGAAGTATTTCGAGGCATCTTGATGCAGccttaaaga aagattttcaacATTATTATGGATGTGTCTCATTCAGACAAGTCAAAGAT TCAACCATCAAACGTggctattttcaaaaatcacttgTTGTTTTATCACA TCTTCCATTTATTGATTTATACTTGTATCTAGCAAAAATTATTGctcctg aattttttgaaaatggtgaAGTTGCATTGGAAACAGTTTGCTATCAAATA GATCGCTGGCCGTGTCCTTACCCTGGTCAATCACTCCACCTGCCAGTCAT GGGAGAAGTCATTGAAGTCAAAGTTCCCATAAATGTCTCTAAGATAAAac ctaaaccagtcaaaaagACTTTACCAAAGGAAATTCAACCATCATCATTT TTTCATTGTGGATATAAAGCCGgattatttcattgttttgagaaagtttt aACACATTTGCACTTGCTTTGGGAATTAGTGTTATTATCTGAGCCCTTGG TTGTAATGGCTCCTTCTCCAGGAATATGTTCAGCAAGTGTTCAATCACTC ATTAGCTTGATAAGCCCACTACCATATGTTTGTGATTATCGTCCATACTT TACAATCCATGATAGTGAACTTAAAGAATATACTGGGCGCACTCATACGC CGCCCAATATTATTTTGGGTGTAACGAATCcgttttttgccaaaactttG CAAATGTGGCCACATATTTTAAGGATTGGTGAAATGCCCTCATTAAGCat gaacaagaaaaataaaaagtctCAAGAATCAAAACCAGGAGTATACACCA AATATAAACCATGTTTGGATCGTGATAAAACTCTTTTGAAGCAACTTCAA AAGACAAACCCTAATGGTTCAAGACCAATAGAAGTTCAAAATGCAATTGT ACGAAACTATATGACTGAATTGACACAAAGTTTTATGATTCCTCTTGAGA GGTATATCGGAAGTCTAATGCCCTTACAACGTAGTATATCACCTTGGAGA AGCCCTCCTAAGCTTCGCAGGTTTAATATTGAAGAGTTCATTCAAACATT ACCTCAGTACGGACCTCAATTAACATCAAAAATGAAAGGAAATTGGCAAG CTTTGTatagaaaatttttctcttctcCAAATTTTGAATCTTGGTTTGAA GTGAAGAAGAAGGAGGTCAATCAGAAGTTGGAGATTCTTCATTTAGAAGC ATTATCAACAGCCAATCTTGATCAATTCCTAAAAAGTAAAGACGAAGTTG AATTGGTAGACCTTTATACTCAAATGAAACTAAAAATACAAAAGTGTAGA AGCTTACATATCTCAAGTAAAGTACAGCATGATATTTTTCTGCAAACGCA AAAGATACTTGCAGCTTTACCTCCAGATTTACAAGAAATGATTCGAAGAA GTTAAAATTATATAGGGTTCAATATTCTAGTTTCTATCCCAATTTTAGTT TTTGATATTAacctttttagtatttttatatATATCATATAATAGtttat taataatttttaatGGCATATTTGAAAGGGTTTGCAATGTAACAATTTTG TATCTTTCATTTGATTTCAATTTAGATAAGGTAAACTTGAGTTAAATCTA AAGATCTACCTTTCGTTTATAAAAGAAACTTATAAAATTTAATCATTGGA TCTTATATGAAATTGAATTCTGATCAaggggggggtgaagcagttagtac aagacatcatgccaattagtaccgtggtggtgtgccatatgaattggata aaatcacttagtactcagatgtactaactgcaaaaaagggtggtcccctg ctaaaaatttgccaaatt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00013466TCONS_00013466Clytia hemisphaericatranscript
TCONS_00013467TCONS_00013467Clytia hemisphaericatranscript
TCONS_00013468TCONS_00013468Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00013468-proteinTCONS_00013468-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000168supercontigsc0000168:351462..358379 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
DENND6Aprotein DENND6A Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.69 5.18 1.83 1.16 16.43 11.23 14.17 15.25 9.2 12.09 10.67 8.65 6.41 5.92 6.44 8.07 7.44 8.56 5.77 5.3 8.6 8.66 13.69 12.84 7.27 9.14 7.69 4.83 12.64 13.4