TCONS_00013671-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00013671-protein
Unique NameTCONS_00013671-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length630

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00013671-protein ID=TCONS_00013671-protein|Name=TCONS_00013671-protein|organism=Clytia hemisphaerica|type=polypeptide|length=630bp
LLSYKSVCQFFTYSYTFSCNLCLLTSKMDTTTQDDQQLRDIQRQYLDFLD
DDADQGFYHAKVRDMIERNEYRLVININDLRKKNPERAMKLLNDSQEEMI
GAQNALKEFVGYADTTYAKKVEEFYIGFEGSFGSKHVSPRSLSARNLGNL
VCCEGIVTKCSLVSPKVVKSVHYCPKTAKTMERRYTDLTSLNPFPSSTAY
PTKDEDGNLLETEYGLSVYKDHQTFTIQEMPEKAPAGQLPRSVDIVSDND
LADKCKPGDRIQVIGIYRCLPSKRQGFTPGTFRTILIANNIKVMSKEVQP
NFSPEDLTKIKKFSRSKSEDVFELLAKSLAPSIHGHNYIKKAILCLLLGG
TEKVLDNGTRLRGDINIMMVGDPSTAKSQLLRYVLHTAPRAIPTTGRGSS
GVGLTAAVTTDQETGERRLEAGAMVLADRGVVCIDEFDKMSDIDRTAIHE
VMEQGRVTIAKAGIHAKLNARCSVLAAANPVYGRYDPFKTPMDNIGMQDS
LLSRFDLLFIVLDKMDPDSDKKISEHVLRMHRYRNPGEQDGDPLPFGGTN
DLLATYANEETEEEEGGTRVYAKKDSQLYGDNRQEKFVSAQFMKKYIHVA
RNIKPMLSQKAADLISERYADLRDQDQQGS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007639XLOC_007639Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00013671TCONS_00013671Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008046Mcm3
IPR001208MCM_dom
IPR031327MCM
IPR003593AAA+_ATPase
IPR033762MCM_OB
IPR027925MCM_N
IPR018525MCM_CS
IPR012340NA-bd_OB-fold
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0005524ATP binding
Vocabulary: Cellular Component
TermDefinition
GO:0042555MCM complex
Vocabulary: Biological Process
TermDefinition
GO:0006270DNA replication initiation
GO:0006260DNA replication
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006260 DNA replication
biological_process GO:0006270 DNA replication initiation
cellular_component GO:0042555 MCM complex
molecular_function GO:0005524 ATP binding
molecular_function GO:0003677 DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008046DNA replication licensing factor Mcm3PRINTSPR01659MCMPROTEIN3coord: 212..226
score: 76.44
coord: 238..250
score: 66.15
coord: 523..533
score: 85.45
coord: 490..500
score: 69.09
IPR001208MCM domainPRINTSPR01657MCMFAMILYcoord: 501..509
score: 78.73
coord: 450..463
score: 68.2
coord: 474..486
score: 72.95
coord: 422..436
score: 78.06
coord: 362..377
score: 67.14
IPR001208MCM domainPFAMPF00493MCMcoord: 308..627
e-value: 2.0E-113
score: 378.7
IPR001208MCM domainPROSITEPS50051MCM_2coord: 321..527
score: 95.663
IPR031327Mini-chromosome maintenance proteinSMARTSM00350mcmcoord: 135..630
e-value: 2.8E-251
score: 850.7
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 363..516
e-value: 3.2E-4
score: 30.0
IPR033762MCM OB domainPFAMPF17207MCM_OBcoord: 140..270
e-value: 4.7E-33
score: 113.6
IPR027925MCM N-terminal domainPFAMPF14551MCM_Ncoord: 42..129
e-value: 2.9E-9
score: 37.3
NoneNo IPR availableGENE3D2.40.50.140coord: 138..295
e-value: 8.4E-40
score: 135.5
NoneNo IPR availableGENE3D3.30.1640.10coord: 25..131
e-value: 6.3E-13
score: 48.4
NoneNo IPR availableGENE3D3.40.50.300coord: 306..536
e-value: 9.6E-17
score: 60.3
NoneNo IPR availableCDDcd00009AAAcoord: 366..511
e-value: 8.32091E-4
score: 37.8959
IPR018525Mini-chromosome maintenance, conserved sitePROSITEPS00847MCM_1coord: 430..438
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 42..290
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 331..532
coord: 578..621

Blast
[Close]
BLAST of TCONS_00013671-protein vs. Swiss-Prot (Human)
Match: MCM3 (DNA replication licensing factor MCM3 OS=Homo sapiens GN=MCM3 PE=1 SV=3)

HSP 1 Score: 899.812 bits (2324), Expect = 0.000e+0
Identity = 428/602 (71.10%), Postives = 515/602 (85.55%), Query Frame = 0 
Query:   30 TTTQDDQQLRDIQRQYLDFLDDDADQGFYHAKVRDMIERNEYRLVININDLRKKNPERAMKLLNDSQEEMIGAQNALKEFVGYADTTYAKKVEEFYIGFEGSFGSKHVSPRSLSARNLGNLVCCEGIVTKCSLVSPKVVKSVHYCPKTAKTMERRYTDLTSLNPFPSSTAYPTKDEDGNLLETEYGLSVYKDHQTFTIQEMPEKAPAGQLPRSVDIVSDNDLADKCKPGDRIQVIGIYRCLPSKRQGFTPGTFRTILIANNIKVMSKEVQPNFSPEDLTKIKKFSRSKSEDVFELLAKSLAPSIHGHNYIKKAILCLLLGGTEKVLDNGTRLRGDINIMMVGDPSTAKSQLLRYVLHTAPRAIPTTGRGSSGVGLTAAVTTDQETGERRLEAGAMVLADRGVVCIDEFDKMSDIDRTAIHEVMEQGRVTIAKAGIHAKLNARCSVLAAANPVYGRYDPFKTPMDNIGMQDSLLSRFDLLFIVLDKMDPDSDKKISEHVLRMHRYRNPGEQDGDPLPFGGTNDLLATYANEETEEEEGGTRVYAKKDSQLYG-DNRQEKFVSAQFMKKYIHVARNIKPMLSQKAADLISERYADLRDQDQQGS 630
            T   DD +LR+ QR YLDFLDD+ DQG Y +KVR++I  N+YRL++N+NDLR+KN +RA +LLN++ EE++  Q ALK+FV   D TYAK+ EEFY+G EGSFGSKHVSPR+L++  L  +VC EGIVTKCSLV PKVV+SVHYCP T KT+ERRY+DLT+L  FPSS+ YPTKDE+ N LETEYGLSVYKDHQT TIQEMPEKAPAGQLPRSVD++ D+DL DK KPGDR+QV+G YRCLP K+ G+T GTFRT+LIA N+K MSK+ QP+FS ED+ KIKKFS+++S+D+F+ LAKSLAPSIHGH+Y+KKAILCLLLGG E+ L+NG+ +RGDINI+++GDPS AKSQLLRYVL TAPRAIPTTGRGSSGVGLTAAVTTDQETGERRLEAGAMVLADRGVVCIDEFDKMSD+DRTAIHEVMEQGRVTIAKAGIHA+LNARCSVLAAANPVYGRYD +KTPM+NIG+QDSLLSRFDLLFI+LD+MDP+ D++IS+HVLRMHRYR PGEQDGD +P G   D+LAT     ++E++  T++Y K D+ L+G   ++EK VSA FMKKYIHVA+ IKP+L+Q++A  I+E Y+ LR QD   S
Sbjct:    4 TVVLDDVELREAQRDYLDFLDDEEDQGIYQSKVRELISDNQYRLIVNVNDLRRKNEKRANRLLNNAFEELVAFQRALKDFVASIDATYAKQYEEFYVGLEGSFGSKHVSPRTLTSCFLSCVVCVEGIVTKCSLVRPKVVRSVHYCPATKKTIERRYSDLTTLVAFPSSSVYPTKDEENNPLETEYGLSVYKDHQTITIQEMPEKAPAGQLPRSVDVILDDDLVDKAKPGDRVQVVGTYRCLPGKKGGYTSGTFRTVLIACNVKQMSKDAQPSFSAEDIAKIKKFSKTRSKDIFDQLAKSLAPSIHGHDYVKKAILCLLLGGVERDLENGSHIRGDINILLIGDPSVAKSQLLRYVLCTAPRAIPTTGRGSSGVGLTAAVTTDQETGERRLEAGAMVLADRGVVCIDEFDKMSDMDRTAIHEVMEQGRVTIAKAGIHARLNARCSVLAAANPVYGRYDQYKTPMENIGLQDSLLSRFDLLFIMLDQMDPEQDREISDHVLRMHRYRAPGEQDGDAMPLGSAVDILATDDPNFSQEDQQDTQIYEKHDNLLHGTKKKKEKMVSAAFMKKYIHVAKIIKPVLTQESATYIAEEYSRLRSQDSMSS 605
The following BLAST results are available for this feature:
BLAST of TCONS_00013671-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MCM30.000e+071.10DNA replication licensing factor MCM3 OS=Homo sapi... [more]
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