TCONS_00013791-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00013791-protein
Unique Name	TCONS_00013791-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	574

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00013791-protein ID=TCONS_00013791-protein|Name=TCONS_00013791-protein|organism=Clytia hemisphaerica|type=polypeptide|length=574bp
VNGKIQHGNGTFLINGIFPITNENEELNPQLGIMYSEAMKWAIQEVNKNR
SYLHGYQFDVNKIYDSIKEEQVQKNVLDTFMEKIPFLVGPYSSDTSYTSS
ILTKTFQDINGISYSATFSDFDMMNSDEERMLRTVPSDRFRVDAVLALIK
DLRWNFVSVVSSYGYNGEREALHLTSKISSVGACLAAQIDLAKSPTNEDY
QKTIDNLRLDSRLKVVVLFTSGKDTRNFMAMLKKLNLANRFNLICAYGCT
NYINVIEGNELVAEGALSLDVKLPDTSKFTEYFLNKKPTANSLEPFNIYW
ERLFDCSLNQTNMRKYLKMCTMKESLKLGSGYYINTPVHTVINAVFHFAR
VVHSFSLVYCHVDRNWVNKTMPCPLDPSTAKSYSMFFHRVLKKSAHKDGT
LYTGTIEPFTMGVGNEVDDGKVQYEVHKYSFKNRENTNTKIWQWVADRQS
KKPGVGKFLEAWYSASPNMTIVEHRGTCSKECPLGSIRDYDRNSLKSKCC
WSCQACPKNHRVMNNTCQPCKQAEVVGPRLCYTVWFIWTQNEAVVIRTTS
ARATGEYSYMVYTTGTFEKSFKYL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_007699	XLOC_007699	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00013791	TCONS_00013791	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001828	ANF_lig-bd_rcpt
IPR028082	Peripla_BP_I

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001828	Receptor, ligand binding region	PFAM	PF01094	ANF_receptor	coord: 37..356 e-value: 8.3E-31 score: 107.3
None	No IPR available	GENE3D	3.40.50.2300		coord: 11..395 e-value: 8.0E-27 score: 93.7
IPR028082	Periplasmic binding protein-like I	SUPERFAMILY	53822	Periplasmic binding protein-like I	coord: 7..362

Blast

[Close]

BLAST of TCONS_00013791-protein vs. Swiss-Prot (Human)
Match: GRM4 (Metabotropic glutamate receptor 4 OS=Homo sapiens GN=GRM4 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.287e-31
Identity = 129/554 (23.29%), Postives = 222/554 (40.07%), Query Frame = 0

Query:    9 NGTFLINGIFPITNENEELNP------QLGIMYSEAMKWAIQEVNKNRSYL-----------------HGYQFDVNKIYDSIKEEQVQKNV------LDTFMEKIPFLVGPYSSDTSYTSSILTKTFQDINGISYSATFSDFDMMNSDEERMLRTVPSDRFRVDAVLALIKDLRWNFVSVVSSYGYNGER--EALHLTSKISSVGACLAAQIDLAKSPTNEDYQKTIDNLRLDSRLKVVVLFTSGKDTRNFMAMLKKLNLANRFNLICAYGCTNYINVIEGNELVAEGALSLDVKLPDTSKFTEYFLNKKPTANSLEP-FNIYWERLFDCSLNQTNMRK--YLKMCTMKESLKLGSGYYINTPVHTVINAVFHFARVVHSFSLVYCHVDRNWVNKTMPCP-LDPSTAKSYSMFFHRVLKKSAHKDGTLYTGTI-EPFTMGVGNEVDDGKVQYEVHKYSFKNRENTNTKIWQWVADRQSKK-----PGVGKFLEAWYSASPNMTIVEHRGTCSKECPLGSIRDYDRNSLKSKCCWSCQACPK-NHRVMNNTCQPC 520
            +G   + G+FP+     E  P      + GI   EAM +A+  +N +   L                 H  +  +  +   I+++  +         + T  E++  ++G   S  S   + + + F+ I  ISY++T  D    NS  +   R VPSD ++  A++ +++ L+WN+VS V+S G  GE   EA    S+    G C+A  + + + P   ++ K I  L   S  + V++F +  D R  +   ++ N    F  + +    + I  +   E VAEGA+++  K      F  YF ++    N     F  +WE  F C L++  ++K  ++K CT +E +   S Y     V  VI+AV+     +H+     C        +   CP +DP        +   V           ++G    P T    NE  D   +Y++++Y  +N       I  W      +      PG G+ L               R  CS  C  G   +  +      CCW C+ C    ++V   TC+ C
Sbjct:   46 DGDITLGGLFPVHGRGSEGKPCGELKKEKGIHRLEAMLFALDRINNDPDLLPNITLGARILDTCSRDTHALEQSLTFVQALIEKDGTEVRCGSGGPPIITKPERVVGVIGASGSSVSIMVANILRLFK-IPQISYASTAPDLSD-NSRYDFFSRVVPSDTYQAQAMVDIVRALKWNYVSTVASEGSYGESGVEAFIQKSR-EDGGVCIAQSVKIPREPKAGEFDKIIRRLLETSNARAVIIFANEDDIRRVLEAARRANQTGHFFWMGSDSWGSKIAPVLHLEEVAEGAVTILPKRMSVRGFDRYFSSRTLDNNRRNIWFAEFWEDNFHCKLSRHALKKGSHVKKCTNRERIGQDSAYEQEGKVQFVIDAVYAMGHALHAMHRDLCP------GRVGLCPRMDPVDGTQLLKYIRNV----------NFSGIAGNPVTF---NENGDAPGRYDIYQYQLRNDSAEYKVIGSWTDHLHLRIERMHWPGSGQQLP--------------RSICSLPCQPG---ERKKTVKGMPCCWHCEPCTGYQYQVDRYTCKTC 560

The following BLAST results are available for this feature:

BLAST of TCONS_00013791-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00013791-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
GRM4	2.287e-31	23.29	Metabotropic glutamate receptor 4 OS=Homo sapiens ...	[more]

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TCONS_00013791-protein (polypeptide) - C. hemisphaerica