TCONS_00013962-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00013962-protein
Unique NameTCONS_00013962-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length116

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00013962-protein ID=TCONS_00013962-protein|Name=TCONS_00013962-protein|organism=Clytia hemisphaerica|type=polypeptide|length=116bp
MGNTLTNTSTSSTHIDEKINTNCIVVYSTTVCGFCTKAKRLMDEMGLQYS
VVEIDRLSPSEGGVVSRSLTEKTNMRTVPQIFINGNLIGGYSELIALQRT
GNLLRRVAECDVNCSK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007812XLOC_007812Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00013962TCONS_00013962Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014025Glutaredoxin_subgr
IPR002109Glutaredoxin
IPR012336Thioredoxin-like_fold
Vocabulary: Molecular Function
TermDefinition
GO:0015035protein disulfide oxidoreductase activity
GO:0009055electron carrier activity
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
molecular_function GO:0009055 electron carrier activity
molecular_function GO:0015035 protein disulfide oxidoreductase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014025Glutaredoxin subgroupPRINTSPR00160GLUTAREDOXINcoord: 24..42
score: 32.68
coord: 71..84
score: 50.3
coord: 85..98
score: 38.69
NoneNo IPR availableGENE3D3.40.30.10coord: 6..115
e-value: 3.8E-26
score: 90.6
NoneNo IPR availableSFLDSFLDG00328Glutaredoxin-likecoord: 14..105
e-value: 2.4E-23
score: 77.5
IPR002109GlutaredoxinPFAMPF00462Glutaredoxincoord: 24..88
e-value: 4.0E-17
score: 62.1
IPR002109GlutaredoxinPROSITEPS51354GLUTAREDOXIN_2coord: 12..114
score: 19.596
IPR012336Thioredoxin-like foldSUPERFAMILY52833Thioredoxin-likecoord: 14..111

Blast
[Close]
BLAST of TCONS_00013962-protein vs. Swiss-Prot (Human)
Match: GLRX2 (Glutaredoxin-2, mitochondrial OS=Homo sapiens GN=GLRX2 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 8.038e-23
Identity = 46/115 (40.00%), Postives = 68/115 (59.13%), Query Frame = 0 
Query:    3 NTLTNTSTSST-HIDEKINTNCIVVYSTTVCGFCTKAKRLMDEMGLQYSVVEIDRLSPSEGGVVSRSLTEKTNMRTVPQIFINGNLIGGYSELIALQRTGNLLRRVAECDVNCSK 116
            ++L N +T+    I E I+ NC+V++S T C +CT AK+L  +M + Y VVE+D L    G     +L + T  RTVP+IF+NG  IGG ++   L + G LL  V +C +  SK
Sbjct:   47 SSLENLATAPVNQIQETISDNCVVIFSKTSCSYCTMAKKLFHDMNVNYKVVELDLL--EYGNQFQDALYKMTGERTVPRIFVNGTFIGGATDTHRLHKEGKLLPLVHQCYLKKSK 159
The following BLAST results are available for this feature:
BLAST of TCONS_00013962-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GLRX28.038e-2340.00Glutaredoxin-2, mitochondrial OS=Homo sapiens GN=G... [more]
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