TCONS_00014227-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00014227-protein
Unique Name	TCONS_00014227-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	358

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00014227-protein ID=TCONS_00014227-protein|Name=TCONS_00014227-protein|organism=Clytia hemisphaerica|type=polypeptide|length=358bp
ENSTKTSFKMTQSGIWRRSLFVSCFIGHCLYYVTRKSLTFSVPILMEDST
MRMTKRDFGLMASLQMITYSIGKFLTGFLVDQYSNKKIFCFGLFCCGLTN
LAFSAVGEKNMFFWIVLANGFFQAFGWNAIAVLVNQWYNKAEIGTVWSLL
SSTINIGTSITPFIIMVITKDHHWKTCFFIIGSITCVFALIATVTIKEYQ
KPLPGLSDTTKSSDDKNKQSGVSSSTKVGNTADTNISKSSDSSQTISTKN
EGTGSTPTSSPFTLLFTSPVFWLISSCYLLWSLVKVGSEDWLQLYLLTGK
SSSQTEGRERPLFKLVRLRLRRRRPEDSTFDGYRPEGREGGSICPWITPL
TLDHSFNC

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_007957	XLOC_007957	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00014227	TCONS_00014227	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000849	Sugar_P_transporter
IPR011701	MFS
IPR020846	MFS_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005215	transporter activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0006810	transport
GO:0055085	transmembrane transport

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0006810	transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005215	transporter activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1250.20		coord: 1..225 e-value: 7.6E-30 score: 103.2
None	No IPR available	GENE3D	1.20.1250.20		coord: 255..308 e-value: 0.24 score: 10.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 205..259
IPR000849	Sugar phosphate transporter	PIRSF	PIRSF002808	Hexose_phosphate_transp	coord: 2..311 e-value: 1.1E-49 score: 167.3
IPR011701	Major facilitator superfamily	PFAM	PF07690	MFS_1	coord: 25..296 e-value: 2.0E-33 score: 115.7
IPR020846	Major facilitator superfamily domain	PROSITE	PS50850	MFS	coord: 20..358 score: 10.08
IPR020846	Major facilitator superfamily domain	CDD	cd06174	MFS	coord: 21..197 e-value: 1.23822E-21 score: 91.6065
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 252..298 coord: 11..221

Blast

[Close]

BLAST of TCONS_00014227-protein vs. Swiss-Prot (Human)
Match: G6PT1 (Glucose-6-phosphate exchanger SLC37A4 OS=Homo sapiens GN=SLC37A4 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 5.661e-29
Identity = 76/294 (25.85%), Postives = 134/294 (45.58%), Query Frame = 0

Query:   14 GIWRRSLFVSCFIGHCLYYVTRKSLTFSVPILMEDSTMRMTKRDFGLMASLQMITYSIGKFLTGFLVDQYSNKKIFCFGLFCCGLTNLAFSAVGEKNMFFWIVLANGFFQAFGWNAIAVLVNQWYNKAEIGTVWSLLSSTINIGTSITPFIIMVITKDHHWKTCFFIIGSITCVFALIATVTIKEYQKPLPGLSDTTKSSDDKNKQSGVSSSTKVGNTADTNISKSSDSSQTISTKNEGTGSTPTSSPFTLLFTSPVFWLISSCYLLWSLVKVGSEDWLQLYLLTGKSSSQTEG 307
            G +R  +F + F G+ LYY  RK+ +F +P L+E+  + + K D G + S Q   Y+I KF++G L DQ S + +F  GL   GL N+ F+      +F  +   NG  Q  GW     ++ +W+  ++ GT W++LS+++N+   + P +  ++ + + W++   + G++  V + +  + I  + +P    +D    + D     G   S K  +T                                 L  SP  W++S+ YL+   VK    DW Q +L+  K  S   G
Sbjct:    7 GYYRTVIFSAMFGGYSLYYFNRKTFSFVMPSLVEE--IPLDKDDLGFITSSQSAAYAISKFVSGVLSDQMSARWLFSSGLLLVGLVNIFFAWSSTVPVFAALWFLNGLAQGLGWPPCGKVLRKWFEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSWRSTLALSGALCVVVSFLCLLLI--HNEP----ADVGLRNLDPMPSEGKKGSLKEESTLQE------------------------------LLLSPYLWVLSTGYLVVFGVKTCCTDWGQFFLIQEKGQSALVG 262

The following BLAST results are available for this feature:

BLAST of TCONS_00014227-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00014227-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
G6PT1	5.661e-29	25.85	Glucose-6-phosphate exchanger SLC37A4 OS=Homo sapi...	[more]

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TCONS_00014227-protein (polypeptide) - C. hemisphaerica