TCONS_00014400-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00014400-protein
Unique NameTCONS_00014400-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length362

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00014400-protein ID=TCONS_00014400-protein|Name=TCONS_00014400-protein|organism=Clytia hemisphaerica|type=polypeptide|length=362bp
NIMAGIVDPSLPHQKYYTKKAMADFKNDILKTHNTYRKTHRSNPLKWSNK
LQANAQRWADKLAKKGYLQHENQSDEGENIACMKGAELTGERAATMWYDE
VKYYDYSKPTFSSKTGHFTQLVWNGSTELGVGRATASNGMQFVVARYNPP
GNILGKFPDNVFSSNGKPPPTTSSNNSNNNRTTRNKPEKRQQQPSSDKQT
DKDFKNAVLRTHNQLRKHHGSGPLRWNSSLASQALSAAQEAAETNTLRSV
DNNKVGQNMAAISGAELTGEKVSNMWYDEEKKYNYREAKFSSSTGSFTQL
VWKGTTDLGVGRAFGPNGQTYVVALYQPAGNVRGLYSENVLQSRGTRPGS
KKEDQGCGCAIM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008057XLOC_008057Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00014400TCONS_00014400Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001283Allrgn_V5/Tpx1
IPR014044CAP_domain
IPR018244Allrgn_V5/Tpx1_CS
IPR034113SCP_GAPR1-like
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005576 extracellular region
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001283Cysteine-rich secretory protein, allergen V5/Tpx-1-relatedPRINTSPR00837V5TPXLIKEcoord: 93..106
score: 38.12
coord: 115..131
score: 46.25
coord: 45..63
score: 35.4
coord: 142..155
score: 43.38
IPR014044CAP domainSMARTSM00198SCP_3coord: 203..334
e-value: 1.9E-27
score: 107.2
coord: 24..155
e-value: 3.9E-37
score: 139.3
IPR014044CAP domainPFAMPF00188CAPcoord: 30..145
e-value: 1.2E-22
score: 81.0
coord: 209..325
e-value: 3.2E-18
score: 66.7
IPR014044CAP domainGENE3D3.40.33.10coord: 17..170
e-value: 2.9E-43
score: 147.1
coord: 196..345
e-value: 8.8E-38
score: 129.3
IPR014044CAP domainSUPERFAMILY55797PR-1-likecoord: 200..341
IPR014044CAP domainSUPERFAMILY55797PR-1-likecoord: 23..161
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 158..203
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 343..362
IPR018244Allergen V5/Tpx-1-related, conserved sitePROSITEPS01009CRISP_1coord: 116..126
IPR034113Golgi-associated plant pathogenesis-related protein 1, SCP domainCDDcd05382SCP_GAPR-1_likecoord: 24..153
e-value: 3.26758E-65
score: 204.366
IPR034113Golgi-associated plant pathogenesis-related protein 1, SCP domainCDDcd05382SCP_GAPR-1_likecoord: 203..332
e-value: 5.87281E-50
score: 164.691

Blast
[Close]
BLAST of TCONS_00014400-protein vs. Swiss-Prot (Human)
Match: GAPR1 (Golgi-associated plant pathogenesis-related protein 1 OS=Homo sapiens GN=GLIPR2 PE=1 SV=3)

HSP 1 Score: 122.865 bits (307), Expect = 5.410e-34
Identity = 64/149 (42.95%), Postives = 91/149 (61.07%), Query Frame = 0 
Query:   19 KKAMADFKNDILKTHNTYRKTHRSNPLKWSNKLQANAQRWADKLAKKGYLQHENQSDEG---ENIACMKGAELTGERAATMWYDEVKYYDYSKPTFSSKTGHFTQLVWNGSTELGVGRATASNGMQFVVARYNPPGNIL--GKFPDNVF 162
            K A   F N++LK HN YR+ H   PLK    L   AQ++++ LA    L+H  +S  G   EN+A     + TG+  A  WY E+K Y++ +P F+S TGHFT +VW  + ++GVG+A+AS+G  FVVARY P GN++  G F +NV 
Sbjct:    3 KSASKQFHNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRGQCGENLA-WASYDQTGKEVADRWYSEIKNYNFQQPGFTSGTGHFTAMVWKNTKKMGVGKASASDGSSFVVARYFPAGNVVNEGFFEENVL 150

HSP 2 Score: 110.153 bits (274), Expect = 2.982e-29
Identity = 60/149 (40.27%), Postives = 88/149 (59.06%), Query Frame = 0 
Query:  198 KQTDKDFKNAVLRTHNQLRKHHGSGPLRWNSSLASQALSAAQEAAETNTLR---SVDNNKVGQNMAAISGAELTGEKVSNMWYDEEKKYNYREAKFSSSTGSFTQLVWKGTTDLGVGRAFGPNGQTYVVALYQPAGNV--RGLYSENVL 341
            K   K F N VL+ HN+ R+ HG  PL+   +L  +A   ++  A T  L+        + G+N+A  S  + TG++V++ WY E K YN+++  F+S TG FT +VWK T  +GVG+A   +G ++VVA Y PAGNV   G + ENVL
Sbjct:    3 KSASKQFHNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRGQCGENLAWAS-YDQTGKEVADRWYSEIKNYNFQQPGFTSGTGHFTAMVWKNTKKMGVGKASASDGSSFVVARYFPAGNVVNEGFFEENVL 150
The following BLAST results are available for this feature:
BLAST of TCONS_00014400-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GAPR15.410e-3442.95Golgi-associated plant pathogenesis-related protei... [more]
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