TCONS_00014570-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00014570-protein
Unique Name	TCONS_00014570-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	329

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00014570-protein ID=TCONS_00014570-protein|Name=TCONS_00014570-protein|organism=Clytia hemisphaerica|type=polypeptide|length=329bp
GGSQTPITTPAVQNAVSAEITKFELNTICKSVLTIVNASLSDSDSMLFKE
IVRGVFGDHADSALFPSYVLSEEMSLLEIVKKTIDENGLSHHKLFEDKIM
QLYQVSQINQGIVICGQSKTGKSTLVQTLIQSLGILAEETDKENHITYHQ
EHINVLAVSSLEQIFGCINEAGDWVNGVFTVALKKANQSLLQHKQSTWIT
LDGPLHDGWCSALNGLFEQRKVYMQPDMKQHHLNKNVTFVYETHTLDHIS
PTVFANMSIVYMDNSALGWRPLANAWLAKQDQTYFHVLQRSFHKSVDRCL
QFVQDEARCCVTLSEGSLFSSCLSMLSSL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_008155	XLOC_008155	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00014570	TCONS_00014570	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.300		coord: 72..266 e-value: 1.3E-16 score: 60.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 86..262

Blast

[Close]

BLAST of TCONS_00014570-protein vs. Swiss-Prot (Human)
Match: DYH5 (Dynein heavy chain 5, axonemal OS=Homo sapiens GN=DNAH5 PE=1 SV=3)

HSP 1 Score: 110.923 bits (276), Expect = 9.607e-27
Identity = 73/307 (23.78%), Postives = 148/307 (48.21%), Query Frame = 0

Query:   26 NTICKSVLTIVNAS-LSDSDSMLFKEIVRGVFGD-HADSALFPSYVLSEEMSLLEIVKKTIDENGLSHHKLFEDKIMQLYQVSQINQGIVICGQSKTGKSTLVQTLIQSLGILAEETDKENHITYHQEHINVLAVSSLEQIFGCINEA-GDWVNGVFTVALKKANQSLLQHKQSTWITLDGPLHDGWCSALNGLFEQRKVYMQPDMKQHHLNKNVTFVYETHTLDHISPTVFANMSIVYMDNSALGWRPLANAWLAKQDQTYFHVLQRSFHKSVDRCLQFVQDEARCCVTLSEGSLFSSCLSMLSSL 329
            +TI   VL  +N S L D D  LF  ++  +F +   D A +P         L   + + ++E GL +H  ++ K++QL++  ++  G++  G S  GK+T + TL++++    +         + +  +N  A+++  Q+FG ++ A  DW +G+F+   +K  ++  +  +  WI LDGP+   W   LN + +  K     +  +  +  N   ++E H +D+ SP   +   +V+M +S L W P+   +L K+      +L++ + +S     +F        + + E  + +  ++ML  L
Sbjct: 2178 STIVMRVLRDMNLSKLIDEDEPLFLSLIEDLFPNILLDKAGYPE--------LEAAISRQVEEAGLINHPPWKLKVIQLFETQRVRHGMMTLGPSGAGKTTCIHTLMRAMTDCGK--------PHREMRMNPKAITA-PQMFGRLDVATNDWTDGIFSTLWRKTLRA--KKGEHIWIILDGPVDAIWIENLNSVLDDNKTLTLANGDRIPMAPNCKIIFEPHNIDNASPATVSRNGMVFMSSSILDWSPILEGFLKKRSPQEAEILRQLYTESFPDLYRFCIQNLEYKMEVLEAFVITQSINMLQGL 2465

The following BLAST results are available for this feature:

BLAST of TCONS_00014570-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00014570-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
DYH5	9.607e-27	23.78	Dynein heavy chain 5, axonemal OS=Homo sapiens GN=...	[more]

You are here

TCONS_00014570-protein (polypeptide) - C. hemisphaerica