TCONS_00015043-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00015043-protein
Unique NameTCONS_00015043-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length304

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00015043-protein ID=TCONS_00015043-protein|Name=TCONS_00015043-protein|organism=Clytia hemisphaerica|type=polypeptide|length=304bp
MLKQYPKKTIEIDKESDKGITFRIHNNNSHVQTVNVEKNPTKGGSSDNTK
NTRSKTPKPTVKKEKDFDEEKKVLPTDKPVTPAPTPKKNNVLPDCSDKGS
KLVGPLFIDQSIPKDMEAVEKDLSVDFGGTVEKGGKWAPTTCKPKHKVAI
IIPYRKRVVQLKSFLKHMHPFLQKQLLDYRIFIIEQLYKDPFNRAGLFNI
GFVEALKLDKEFDCFVFTDVDLLPEDDRNFYNCPTSPRHMSVAIDKFHYQ
LPYATIFGGCGSFLRDDFEKINGFSNLFFGWGGEDDDLYKRLLSLSHIVN
DLNS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008417XLOC_008417Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00015043TCONS_00015043Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003859Galactosyl_T
IPR029044Nucleotide-diphossugar_trans
IPR027995Galactosyl_T_N
IPR027791Galactosyl_T_C
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016757transferase activity, transferring glycosyl groups
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003859Beta-1,4-galactosyltransferasePRINTSPR02050B14GALTRFASEcoord: 251..272
score: 38.09
coord: 182..201
score: 50.42
coord: 214..233
score: 56.59
coord: 273..291
score: 67.05
IPR029044Nucleotide-diphospho-sugar transferasesGENE3D3.90.550.10coord: 81..300
e-value: 1.2E-28
score: 99.8
IPR029044Nucleotide-diphospho-sugar transferasesSUPERFAMILY53448Nucleotide-diphospho-sugar transferasescoord: 130..295
IPR027995Galactosyltransferase, N-terminalPFAMPF13733Glyco_transf_7Ncoord: 95..234
e-value: 2.0E-48
score: 163.3
IPR027791Galactosyltransferase, C-terminalPFAMPF02709Glyco_transf_7Ccoord: 238..294
e-value: 1.2E-22
score: 79.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..96

Blast
[Close]
BLAST of TCONS_00015043-protein vs. Swiss-Prot (Human)
Match: B4GT1 (Beta-1,4-galactosyltransferase 1 OS=Homo sapiens GN=B4GALT1 PE=1 SV=5)

HSP 1 Score: 211.075 bits (536), Expect = 1.100e-65
Identity = 103/215 (47.91%), Postives = 139/215 (64.65%), Query Frame = 0 
Query:   80 VTPAPTPKKNNV-LPDCSDKGSKLVGPLFIDQSIPKDMEAVEKDLSVDFGGTVEKGGKWAPTTCKPKHKVAIIIPYRKRVVQLKSFLKHMHPFLQKQLLDYRIFIIEQLYKDPFNRAGLFNIGFVEALKLDKEFDCFVFTDVDLLPEDDRNFYNCPTSPRHMSVAIDKFHYQLPYATIFGGCGSFLRDDFEKINGFSNLFFGWGGEDDDLYKRLL 293
            +T  P P    + LP C ++   LVGP+ I+ ++P D+E V K         V+ GG++AP  C   HKVAIIIP+R R   LK +L ++HP LQ+Q LDY I++I Q     FNRA L N+GF EALK D ++ CFVF+DVDL+P +D N Y C + PRH+SVA+DKF + LPY   FGG  +  +  F  INGF N ++GWGGEDDD++ RL+
Sbjct:  114 LTSVPVPHTTALSLPACPEESPLLVGPMLIEFNMPVDLELVAKQ-----NPNVKMGGRYAPRDCVSPHKVAIIIPFRNRQEHLKYWLYYLHPVLQRQQLDYGIYVINQAGDTIFNRAKLLNVGFQEALK-DYDYTCFVFSDVDLIPMNDHNAYRCFSQPRHISVAMDKFGFSLPYVQYFGGVSALSKQQFLTINGFPNNYWGWGGEDDDIFNRLV 322
The following BLAST results are available for this feature:
BLAST of TCONS_00015043-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
B4GT11.100e-6547.91Beta-1,4-galactosyltransferase 1 OS=Homo sapiens G... [more]
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