TCONS_00015278-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00015278-protein
Unique NameTCONS_00015278-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length617

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00015278-protein ID=TCONS_00015278-protein|Name=TCONS_00015278-protein|organism=Clytia hemisphaerica|type=polypeptide|length=617bp
MCCILKMENSDKPFQCPKCELCFANSDRLAVHLLVHLKQPLKQRLRVKIP
GSASENVDDQTPTPSSFLKTADVNGSPLFQDLNPFDRDFKLASNSRQTSV
VEQHPEVGSTTGASKHQISILETPQVELEDAGFPKLFSQPSVVSQESGKP
VSVITSSIDDTSSSASSSSSAKHVSNNEQNSTAFLQSILNQLKAQAKQEQ
EEKEAQEREILQLQREQQAHSKMESELECAESSDSQQSNKESVAQEQLRE
QLNSLIKSGQIKIQISPSSSVQSKVQASIIGNVATISKPTEQQLSAASTV
VQQQQPRTIAPKVATSQEIHQEMTSPPPPVTRSIASVGPMSVNKVTPMSV
IERSILSSSTVTSDVVVLPGTNLQIAKQKLKQVIQQSPGNQALLQSLVSP
AIVSSKPTMVQTAPIAHTTQMTPPSMIIGGRGSQQGKYKDIILKDEYGDE
ITMKRKQRINQEDSTPEEKRGRFLERNRAAASRCRQKRKIWVDQLEKRSD
ELVQTNTQLMTEIQSLRSEVAQLKALLLAHKDCPVTQQQKALVNQIANAG
TYVTVSDGQLIAIHQLPPSAIREASDEEVASSALTDMAARATIELGKKAV
SGVVTVQANDTVETKMS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008545XLOC_008545Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00015278TCONS_00015278Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004827bZIP
IPR013087Znf_C2H2_type
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 492..526
NoneNo IPR availableCOILSCoilCoilcoord: 182..233
NoneNo IPR availableGENE3D3.40.50.300coord: 90..294
e-value: 0.0019
score: 16.8
NoneNo IPR availableGENE3D1.20.5.170coord: 454..532
e-value: 3.5E-17
score: 61.6
NoneNo IPR availableGENE3D3.30.160.60coord: 5..54
e-value: 1.4E-4
score: 21.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 305..332
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 215..246
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 96..118
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 154..177
NoneNo IPR availableCDDcd14687bZIP_ATF2coord: 469..529
e-value: 1.85017E-23
score: 93.362
NoneNo IPR availableSUPERFAMILY57959Leucine zipper domaincoord: 469..529
IPR004827Basic-leucine zipper domainSMARTSM00338brlzneucoord: 465..529
e-value: 8.3E-18
score: 75.2
IPR004827Basic-leucine zipper domainPFAMPF00170bZIP_1coord: 467..525
e-value: 8.9E-14
score: 51.3
IPR004827Basic-leucine zipper domainPROSITEPS00036BZIP_BASICcoord: 472..487
IPR004827Basic-leucine zipper domainPROSITEPS50217BZIPcoord: 467..530
score: 12.553
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 16..36
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 14..41
score: 9.265
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 8..37

Blast
[Close]
BLAST of TCONS_00015278-protein vs. Swiss-Prot (Human)
Match: ATF7 (Cyclic AMP-dependent transcription factor ATF-7 OS=Homo sapiens GN=ATF7 PE=1 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 4.449e-29
Identity = 58/89 (65.17%), Postives = 68/89 (76.40%), Query Frame = 0 
Query:  452 TMKRKQRINQEDSTPEEKRGRFLERNRAAASRCRQKRKIWVDQLEKRSDELVQTNTQLMTEIQSLRSEVAQLKALLLAHKDCPVTQQQK 540
            T  R++R   ED  P+E+R RFLERNRAAASRCRQKRK+WV  LEK+++EL   N QL  E+  LR+EVAQLK LLLAHKDCPVT  QK
Sbjct:  330 TGGRRRRTVDED--PDERRQRFLERNRAAASRCRQKRKLWVSSLEKKAEELTSQNIQLSNEVTLLRNEVAQLKQLLLAHKDCPVTALQK 416
The following BLAST results are available for this feature:
BLAST of TCONS_00015278-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ATF74.449e-2965.17Cyclic AMP-dependent transcription factor ATF-7 OS... [more]
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