TCONS_00015692-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00015692-protein
Unique Name	TCONS_00015692-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	312

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00015692-protein ID=TCONS_00015692-protein|Name=TCONS_00015692-protein|organism=Clytia hemisphaerica|type=polypeptide|length=312bp
MTKKEKAIENIDAFTHFVAGWVSGCAGVLVSHPLDTVKVRLQTQGVSAIQ
QQYRGTWHCLSETIKNEKVYGLFKGMSSPLLGTALWNAVIFGTYGNTIRW
LAGDSLEEQHRMSNVVIASLASGFTQTFVITPLELTKTRLQIQTSQKNQV
YKGLIDCCRQIYRQQGFFGLFKGFNATFIRDAIGFTAFFGIFEQFSRWIS
KEGPPYRDITIVGHVVAGGLTGAISWGCAFPADVIKCRIQVDYEGRYNGF
IDCVRKSYKEEGPALFRRGFWPCVLRGFPMNAAIFSIYHYMIRVYEDHDM
ADRIVTKFLYVD

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_008756	XLOC_008756	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00015692	TCONS_00015692	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002067	Mit_carrier
IPR023395	Mt_carrier_dom
IPR018108	Mitochondrial_sb/sol_carrier

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002067	Mitochondrial carrier protein	PRINTS	PR00926	MITOCARRIER	coord: 171..189 score: 21.92 coord: 125..143 score: 29.16 coord: 29..43 score: 33.11 coord: 16..29 score: 25.41 coord: 218..240 score: 20.81
IPR023395	Mitochondrial carrier domain	GENE3D	1.50.40.10		coord: 7..295 e-value: 2.7E-81 score: 272.1
IPR023395	Mitochondrial carrier domain	SUPERFAMILY	103506	Mitochondrial carrier	coord: 10..290
IPR018108	Mitochondrial substrate/solute carrier	PFAM	PF00153	Mito_carr	coord: 111..201 e-value: 5.1E-22 score: 77.5 coord: 208..297 e-value: 3.4E-19 score: 68.5 coord: 11..103 e-value: 1.1E-23 score: 82.9
IPR018108	Mitochondrial substrate/solute carrier	PROSITE	PS50920	SOLCAR	coord: 209..294 score: 22.084
IPR018108	Mitochondrial substrate/solute carrier	PROSITE	PS50920	SOLCAR	coord: 110..198 score: 24.079
IPR018108	Mitochondrial substrate/solute carrier	PROSITE	PS50920	SOLCAR	coord: 11..100 score: 24.079
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..25 score: 7.0

Blast

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BLAST of TCONS_00015692-protein vs. Swiss-Prot (Human)
Match: MCATL (Mitochondrial basic amino acids transporter OS=Homo sapiens GN=SLC25A29 PE=1 SV=2)

HSP 1 Score: 223.402 bits (568), Expect = 1.528e-71
Identity = 117/273 (42.86%), Postives = 160/273 (58.61%), Query Frame = 0

Query:   17 FVAGWVSGCAGVLVSHPLDTVKVRLQTQGVSAIQQQYRGTWHCLSETIKNEKVYGLFKGMSSPLLGTALWNAVIFGTYGNTIRWLAGDSLEEQHRMSNVVIASLASGFTQTFVITPLELTKTRLQIQTSQKNQVYKGLIDCCRQIYRQQGFFGLFKGFNATFIRDAIGFTAFFGIFEQFSRWISKEGPPYRDITIVGHVVAGGLTGAISWGCAFPADVIKCRIQVD---YEGRYNGFIDCVRKSYKEEGPALFRRGFWPCVLRGFPMNAAIFS 286
            F+AG   G AGVLV HP DTVKVRLQ Q V   + QYRGT HC    IK E V GL+KG+ SPL+G    NA++FG  GNT+R L  DS   Q       +A  A+G  Q  +  P+EL KTRLQ+Q +   + YKG +DC  QIY  +G  G+ +G  +T +R+   F  +F  ++  +R +  E  P   + +   ++AGG +G +SW   +P DV+K R+Q D      RY G +DCV +SY+ EG  +F RG    +LR FP+NAA F+
Sbjct:    5 FLAGCAGGVAGVLVGHPFDTVKVRLQVQSVE--KPQYRGTLHCFKSIIKQESVLGLYKGLGSPLMGLTFINALVFGVQGNTLRALGHDSPLNQF------LAGAAAGAIQCVICCPMELAKTRLQLQDAGPARTYKGSLDCLAQIYGHEGLRGVNRGMVSTLLRETPSFGVYFLTYDALTRALGCE--PGDRLLVPKLLLAGGTSGIVSWLSTYPVDVVKSRLQADGLRGAPRYRGILDCVHQSYRAEGWRVFTRGLASTLLRAFPVNAATFA 267

The following BLAST results are available for this feature:

BLAST of TCONS_00015692-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00015692-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
MCATL	1.528e-71	42.86	Mitochondrial basic amino acids transporter OS=Hom...	[more]

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TCONS_00015692-protein (polypeptide) - C. hemisphaerica