TCONS_00015701-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00015701-protein
Unique NameTCONS_00015701-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length312

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00015701-protein ID=TCONS_00015701-protein|Name=TCONS_00015701-protein|organism=Clytia hemisphaerica|type=polypeptide|length=312bp
MPMKTKLKQLYADENQIETLSADSFSGASNLLNIEMKKNKVKSLPVGIFD
PLKPNNQLKIELTENYLTEIPNGLFTKLTEFQFILADKNLLTKIGDTAFQ
GVRAYAINIKDNKITELLKSTFEGAQLQILQVDDNPIRCQCSLKDLHGLV
DQMTGTCINKTSAEIDSAEWIREELCNECEVNNTCQHGGICVPVGKMDIN
CKCINDYHGKNCQDKPICESVTCQNKGTCKNLSPSNYTCECKDNYSGNHC
EIFNEDNSLTVAEIVGIVLGVLLFFILLVVIYMLCRKRCQKGGDGKAKAG
EGVPLKGGPVSA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008759XLOC_008759Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00015701TCONS_00015701Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000742EGF-like_dom
IPR026906LRR_5
IPR032675L_dom-like
IPR013032EGF-like_CS
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000742EGF-like domainSMARTSM00181egf_5coord: 217..251
e-value: 0.001
score: 28.4
coord: 178..213
e-value: 0.0018
score: 27.6
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 214..251
score: 17.641
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 177..213
score: 13.905
IPR026906Leucine rich repeat 5PFAMPF13306LRR_5coord: 6..125
e-value: 1.4E-8
score: 34.6
NoneNo IPR availableGENE3D1.20.5.100coord: 255..292
e-value: 1.1E-7
score: 30.9
NoneNo IPR availableGENE3D2.10.25.10coord: 217..254
e-value: 2.5E-9
score: 36.7
NoneNo IPR availableGENE3D2.10.25.10coord: 176..216
e-value: 2.3E-6
score: 27.0
NoneNo IPR availableCDDcd00054EGF_CAcoord: 177..213
e-value: 0.0018651
score: 34.5346
NoneNo IPR availableCDDcd00054EGF_CAcoord: 218..251
e-value: 1.09017E-4
score: 38.0014
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 217..253
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 177..214
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 1..175
e-value: 1.1E-17
score: 63.3
IPR032675Leucine-rich repeat domain, L domain-likeSUPERFAMILY52058L domain-likecoord: 5..172
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 201..212
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 239..250

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00015701-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top