TCONS_00015707-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00015707-protein
Unique NameTCONS_00015707-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length216

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00015707-protein ID=TCONS_00015707-protein|Name=TCONS_00015707-protein|organism=Clytia hemisphaerica|type=polypeptide|length=216bp
MVTTDATQQQTTAENTPTHTTSGCKKVVVVGDGSCGKTCLLMSIIERDAP
DGYVPTVFETYVKEIDHGKTSYEVSFYDTAGQDVYDRLRPLSYPDTDVFL
VCFAVDSPDSLYNAYDKWTPEVKHFGPNVPFVLVGTKCDLRSDESTLKRL
RKAKQEVITQEEGREMAKKLKASAYVECSALTGFNVNEVISTALKSALKK
QHKQLNKLKQLRCTFL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008761XLOC_008761Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00015707TCONS_00015707Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005225Small_GTP-bd_dom
IPR001806Small_GTPase
IPR003578Small_GTPase_Rho
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Biological Process
TermDefinition
GO:0007264small GTPase mediated signal transduction
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007264 small GTPase mediated signal transduction
cellular_component GO:0005622 intracellular
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 127..140
score: 54.5
coord: 48..64
score: 21.28
coord: 25..46
score: 41.59
coord: 65..87
score: 26.9
coord: 175..197
score: 31.13
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 26..200
e-value: 1.3E-10
score: 22.9
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 22..200
e-value: 1.6E-11
score: 45.8
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 27..200
e-value: 4.6E-87
score: 305.2
NoneNo IPR availableGENE3D3.40.50.300coord: 96..201
e-value: 6.5E-28
score: 96.3
NoneNo IPR availableGENE3D3.30.70.1390coord: 25..94
e-value: 2.1E-14
score: 52.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availableCDDcd00157Rhocoord: 26..195
e-value: 1.8562E-89
score: 262.48
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 24..178
e-value: 2.3E-31
score: 106.7
IPR001806Small GTPase superfamilyPFAMPF00071Rascoord: 26..198
e-value: 6.1E-45
score: 152.6
IPR003578Small GTPase superfamily, Rho typePROSITEPS51420RHOcoord: 17..197
score: 23.187
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 26..197

Blast
[Close]
BLAST of TCONS_00015707-protein vs. Swiss-Prot (Human)
Match: RHOA (Transforming protein RhoA OS=Homo sapiens GN=RHOA PE=1 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.318e-71
Identity = 102/178 (57.30%), Postives = 130/178 (73.03%), Query Frame = 0 
Query:   25 KKVVVVGDGSCGKTCLLMSIIERDAPDGYVPTVFETYVKEIDHGKTSYEVSFYDTAGQDVYDRLRPLSYPDTDVFLVCFAVDSPDSLYNAYDKWTPEVKHFGPNVPFVLVGTKCDLRSDESTLKRLRKAKQEVITQEEGREMAKKLKASAYVECSALTGFNVNEVISTALKSALKKQH 202
            KK+V+VGDG+CGKTCLL+   +   P+ YVPTVFE YV +I+      E++ +DTAGQ+ YDRLRPLSYPDTDV L+CF++DSPDSL N  +KWTPEVKHF PNVP +LVG K DLR+DE T + L K KQE +  EEGR+MA ++ A  Y+ECSA T   V EV   A ++AL+ + 
Sbjct:    6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQARR 183
The following BLAST results are available for this feature:
BLAST of TCONS_00015707-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RHOA2.318e-7157.30Transforming protein RhoA OS=Homo sapiens GN=RHOA ... [more]
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