TCONS_00015933-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00015933-protein
Unique Name	TCONS_00015933-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	369

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00015933-protein ID=TCONS_00015933-protein|Name=TCONS_00015933-protein|organism=Clytia hemisphaerica|type=polypeptide|length=369bp
RATKNVYIACDFQNSAVSIYSIFKMADAKLEKSKQMETMKPKKTTLRKNA
GVSLETEDLIYPNEHSNLPGYCGYTPKLKFNCGHTYGYHTDKLADKHSKN
ERLLTSRAQANEEIIQKYDFLPQDGGDRKYVERMVPGYTGYVPHHNFTYG
KTYKEGTESSIAQFKHQAMKGQVAKDELTDTVRSLSKLRLSEDYPPPDPT
HPGVNVRYAYANYGKYFDEKRSFTEAPMPGYKGYVPRNEEHKLGSRYSIW
TRHAYTNSLETRLQEERNSTQPLGTLQFSKSSQPDKHSKTKTWPPPDLSN
SRDSFVYNKRLGMVPNYTGYVPQRRFDFGTTYGDSTRLLPVCKDTIGYAT
GKYNNSGPPIERTVIPVRI

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_008896	XLOC_008896	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00015933	TCONS_00015933	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR018902	UPF0573/UPF0605

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018902	Uncharacterised protein family UPF0573/UPF0605	PFAM	PF10629	DUF2475	coord: 133..171 e-value: 9.4E-7 score: 28.9 coord: 66..110 e-value: 1.2E-8 score: 34.9 coord: 312..337 e-value: 7.7E-6 score: 25.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 261..299

Blast

[Close]

BLAST of TCONS_00015933-protein vs. Swiss-Prot (Human)
Match: F166B (Protein FAM166B OS=Homo sapiens GN=FAM166B PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.298e-16
Identity = 80/292 (27.40%), Postives = 118/292 (40.41%), Query Frame = 0

Query:   68 LPGYCGYTPKLKFNCGHTYGYHTDKL-------ADKHSKNERLLTSRAQANEEIIQKYDFLPQDGGDRKYVERMVPGYTGYVPHHNFTYGKTYKEGTESSIAQFKHQAMKGQVAKDELTDTVRSLSKLRLSEDYPPPDPT--HPGVNVRYAYANYGKYFDEKRSFTEAPMPGYKGYVPRNEEHKLGSRYSIWTRHAYTNSLETRLQEERNSTQPLGTLQFSKSSQPDKHSKTKTWPPPDLSNSRDSFVYNKRLGMVPNYTGYVPQRRFDFGTTYGDSTRLLPVCKDTIGYAT 350
            +PGY G+ P L+F+ G TYG  T +L       A        L   R   + E+ +  + LP   G  +    M+PGYTG+VP   F + K   +    +++ F H  +  +   +EL    +   K    +  P P+     P + V    + Y     + R F    M G+ GYVP       GS + + T  A        LQE            F +   P      K  PP  L  +     Y + LG++PNY GYVP  +F FG T+G  T       D +G +T
Sbjct:   19 IPGYTGHCPLLRFSVGQTYGQVTGQLLRGPPGLAWPPVHRTLLPPIRPPRSPEVPR--ESLPVRRGQERLSSSMIPGYTGFVPRAQFIFAKNCSQVWAEALSDFTH--LHEKQGSEELPKEAKG-RKDTEKDQVPEPEGQLEEPTLEVVEQASPYSMDDRDPRKFF---MSGFTGYVP-CARFLFGSSFPVLTNQA--------LQE------------FGQKHSPGSAQDPKHLPP--LPRT-----YPQNLGLLPNYGGYVPGYKFQFGHTFGHLTH------DALGLST 268

The following BLAST results are available for this feature:

BLAST of TCONS_00015933-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00015933-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
F166B	2.298e-16	27.40	Protein FAM166B OS=Homo sapiens GN=FAM166B PE=2 SV...	[more]

You are here

TCONS_00015933-protein (polypeptide) - C. hemisphaerica