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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00016248-protein ID=TCONS_00016248-protein|Name=TCONS_00016248-protein|organism=Clytia hemisphaerica|type=polypeptide|length=361bp
MSRNKNSSVFTETKKALEQNDVVKLKNILKNIENKDLFVEEFKLSPLSFA
IKQNCSESVIKELVNIEGMINEGVNYETLNEIDINPIILACKNKNYDIME
LLIEKGAFLDVKDFCGVPLLHLACRNGLKFVKLLIYNGANPRLMCLSENT
VLHEAIHSHASFELVHFLLKCGINTSAKNTFGDTAVCIAVADDKLEPAVR
VMLQTTMAQQQKSTSIKETVKRKLCNAQTQPLDKLKNDIQQIEKKMRTND
TALRKAYERVATLEEKQSDFLKSVTSKRKELNKFIDSTSTVFGTQLECPY
CMDEFSTGVIIYQCSNGHLLCTKCQQRFKKCQQCTVALDVPIRNTALEGI
VKSMSTVKRES Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 232..252 |
| None | No IPR available | COILS | Coil | Coil | coord: 15..35 |
| None | No IPR available | CDD | cd00204 | ANK | coord: 80..196
e-value: 1.12286E-23
score: 93.217 |
| IPR002110 | Ankyrin repeat | SMART | SM00248 | ANK_2a | coord: 82..111
e-value: 0.079
score: 22.1
coord: 115..143
e-value: 16.0
score: 14.4
coord: 42..72
e-value: 1100.0
score: 4.7
coord: 147..177
e-value: 20.0
score: 14.1 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 82..114
score: 8.816 |
| IPR020683 | Ankyrin repeat-containing domain | GENE3D | 1.25.40.20 | | coord: 1..119
e-value: 7.5E-15
score: 54.3 |
| IPR020683 | Ankyrin repeat-containing domain | GENE3D | 1.25.40.20 | | coord: 120..213
e-value: 4.6E-15
score: 55.1 |
| IPR020683 | Ankyrin repeat-containing domain | PFAM | PF12796 | Ank_2 | coord: 47..142
e-value: 3.7E-10
score: 40.2 |
| IPR020683 | Ankyrin repeat-containing domain | PROSITE | PS50297 | ANK_REP_REGION | coord: 42..204
score: 23.976 |
| IPR020683 | Ankyrin repeat-containing domain | SUPERFAMILY | 48403 | Ankyrin repeat | coord: 16..196 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | GENE3D | 3.30.40.10 | | coord: 214..361
e-value: 7.4E-5
score: 21.8 |
Blast
The following BLAST results are available for this feature:
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