TCONS_00016579-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00016579-protein
Unique NameTCONS_00016579-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length469

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00016579-protein ID=TCONS_00016579-protein|Name=TCONS_00016579-protein|organism=Clytia hemisphaerica|type=polypeptide|length=469bp
MAAGFFARAARSGKSGAKIFSNSRYANSSRSKATTSLQRKALSTKSNRTS
ILAITSTNSFNHAFANKVSIAFPPPNCGLLSAVTSCGLHTTSVNAVEGEG
SGETGSSVSEATTNTDSAIDPLGVNFPPGDGGGGGGGITETAQDIFASGL
PLDIPLSELGLGGYTPVGAITNALDFLHLTCGMPWWGAIVAGTIVFRALV
FPLMIKGQINSAKLSAIKPELDRLQENLKEKSNFQNPMMKAQASIELQQL
FQKHDCHPAKALITPLIQLPLFVSFFIALRKMSYLPVEALKTGGVLWFPD
LTAADPYFILPLLCAGTMLATIETGAEMGMQANDQAKTMKNVFRGMCVVM
VPLTYHFPTAIFTYWFTSNILSLVQVGVMRVPGVKEYFGIPPTIVPKIDP
SVKQGSFIENLRAGYKGAIEAAHVQHEEKMKEREYKSSLKNTYEETFDYN
PKRVQQNEEIFEESKKTAK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009267XLOC_009267Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00016579TCONS_00016579Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001708Membrane_insert_OXA1/ALB3/YidC
IPR028055Membr_insert_YidC/Oxa1_C
Vocabulary: Biological Process
TermDefinition
GO:0051205protein insertion into membrane
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051205 protein insertion into membrane
cellular_component GO:0016021 integral component of membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001708Membrane insertase OXA1/ALB3/YidCPFAMPF0209660KD_IMPcoord: 185..377
e-value: 6.2E-30
score: 104.2
IPR028055Membrane insertase YidC/Oxa1, C-terminalTIGRFAMTIGR03592TIGR03592coord: 185..378
e-value: 1.6E-29
score: 101.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 95..122

Blast
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BLAST of TCONS_00016579-protein vs. Swiss-Prot (Human)
Match: OXA1L (Mitochondrial inner membrane protein OXA1L OS=Homo sapiens GN=OXA1L PE=1 SV=3)

HSP 1 Score: 258.455 bits (659), Expect = 2.049e-81
Identity = 122/295 (41.36%), Postives = 185/295 (62.71%), Query Frame = 0 
Query:  157 SELGLGGYTPVGAITNALDFLHLTCGMPWWGAIVAGTIVFRALVFPLMIKGQINSAKLSAIKPELDRLQENLKEKSNFQNPMMKAQASIELQQLFQKHDCHPAKALITPLIQLPLFVSFFIALRKMSYLPVEALKTGGVLWFPDLTAADPYFILPLLCAGTMLATIETGAEMGMQANDQAKTMKNVFRGMCVVMVPLTYHFPTAIFTYWFTSNILSLVQVGVMRVPGVKEYFGIPPTIVPKIDPSVKQGSFIENLRAGYKGAIEAAHVQHEEKMKEREYKSSLKNTYEETFDYNP 451
            +ELGLG YTPVG I N L+F+H+  G+PWWGAI A T+  R L+FPL++ GQ  +A++    PE+ +    ++E     + +   +AS E+    +KH     K LI P+ Q P+F+SFFIALR+M+ LPV +L+TGG+ WF DLT +DP +ILPL    TM A +E GAE G+Q++D  + M+NV R M ++ +P+T HFPTA+F YW +SN+ SLVQV  +R+P V+    IP  +V  +D    +  F+E+ + G+K A     ++  E+    + + + +    +TF +NP
Sbjct:  112 AELGLGSYTPVGLIQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPLIVTGQREAARIHNHLPEIQKFSSRIREAKLAGDHIEYYKASSEMALYQKKHGIKLYKPLILPVTQAPIFISFFIALREMANLPVPSLQTGGLWWFQDLTVSDPIYILPLAVTATMWAVLELGAETGVQSSD-LQWMRNVIRMMPLITLPITMHFPTAVFMYWLSSNLFSLVQVSCLRIPAVRTVLKIPQRVVHDLDKLPPREGFLESFKKGWKNAEMTRQLREREQRMRNQLELAARGPLRQTFTHNP 405
The following BLAST results are available for this feature:
BLAST of TCONS_00016579-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
OXA1L2.049e-8141.36Mitochondrial inner membrane protein OXA1L OS=Homo... [more]
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