TCONS_00017377-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00017377-protein
Unique NameTCONS_00017377-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length329

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00017377-protein ID=TCONS_00017377-protein|Name=TCONS_00017377-protein|organism=Clytia hemisphaerica|type=polypeptide|length=329bp
MKMRSDITNLKLQYMLNMKRNPQRLADKNYQNGYRQRRENDNVIVMGGKD
SYLSPSSTVSKFDIKSNTWKPCKLLNHARSSASAAYLQDHIYLTGGICEN
QDGRGSTHTRSVSCFTNKSDKWFNISPMSQQRSSHVTITHGNKVYAIGGY
DGQMSLKSAECYDPYTDTWTEIESMNYHRSSFAAVTMDQYIYVLGGHNTC
TVERYDTCNACWELMPAMSTKRLNFGAAQVCGFIYVVGGHDGREYLRSME
RFDPVSSEWSVVCPMPSVRSGIGVTAAQHEIFVFGGHNGSRYLSSAYKYD
VFQDKWTSIPDMTTARCDMAVISMDSPEN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009729XLOC_009729Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00017377TCONS_00017377Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006652Kelch_1
IPR015915Kelch-typ_b-propeller
IPR011043Gal_Oxase/kelch_b-propeller
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00501KELCHREPEATcoord: 158..172
score: 34.38
coord: 216..228
score: 32.69
coord: 141..154
score: 37.95
IPR006652Kelch repeat type 1SMARTSM00612kelc_smartcoord: 190..232
e-value: 1.6E-5
score: 34.3
coord: 143..189
e-value: 3.8E-17
score: 73.0
coord: 90..142
e-value: 0.001
score: 28.4
coord: 233..279
e-value: 4.2E-11
score: 52.9
coord: 42..89
e-value: 3.5E-4
score: 29.9
coord: 280..326
e-value: 3.6E-12
score: 56.4
IPR006652Kelch repeat type 1PFAMPF01344Kelch_1coord: 269..312
e-value: 4.3E-11
score: 42.1
coord: 41..72
e-value: 2.8E-4
score: 20.3
coord: 132..176
e-value: 1.2E-15
score: 56.7
coord: 78..129
e-value: 3.5E-5
score: 23.2
coord: 222..266
e-value: 1.3E-11
score: 43.7
coord: 179..219
e-value: 1.3E-10
score: 40.6
IPR015915Kelch-type beta propellerGENE3D2.120.10.80coord: 199..327
e-value: 4.4E-29
score: 101.0
coord: 34..198
e-value: 2.7E-35
score: 121.3
IPR011043Galactose oxidase/kelch, beta-propellerSUPERFAMILY50965Galactose oxidase, central domaincoord: 40..139
IPR011043Galactose oxidase/kelch, beta-propellerSUPERFAMILY50965Galactose oxidase, central domaincoord: 111..324

Blast
[Close]
BLAST of TCONS_00017377-protein vs. Swiss-Prot (Human)
Match: KLH28 (Kelch-like protein 28 OS=Homo sapiens GN=KLHL28 PE=2 SV=2)

HSP 1 Score: 194.126 bits (492), Expect = 2.570e-57
Identity = 101/296 (34.12%), Postives = 157/296 (53.04%), Query Frame = 0 
Query:   35 RQRRENDNVIVMGGKDSYLSPSSTVSKFDIKSNTWKPCKLLNHARSSASAAYLQDHIYLTGGICENQDGRGST---HTRSVSCFTNKSDKWFNISPMSQQRSSHVTITHGNKVYAIGGYDGQMSLKSAECYDPYTDTWTEIESMNYHRSSFAAVTMDQYIYVLGGHNTC---TVERYDTCNACWELMPAMSTKRLNFGAAQVCGFIYVVGGHDGREYLRSMERFDPVSSEWSVVCPMPSVRSGIGVTAAQHEIFVFGGHNGSRYLSSAYKYDVFQDKWTSIPDMTTARCDMAVISM 324
            R R     +  +GGK    +   +V  +  ++++W     LN  R       L   +Y+ GGI  N    G T   H  SV C+   ++ W ++  M++ RS+   +    ++YA+GGYDGQ  L+S E Y P    W  +  M   RS FAA  +D  IY +GG+      +VERYD     WE++ +M+ KR++FG   + GFI+VVGGH+G  +L S+ER+DP  ++W+V  PM   R+G+G     + ++V GGH+GS YL++  KYD   D W     M   RC+  + ++
Sbjct:  277 RPRCAPKVLCAVGGKSGLFACLDSVEMYFPQNDSWIGLAPLNIPRYEFGICVLDQKVYVIGGIATNVRP-GVTIRKHENSVECWNPDTNTWTSLERMNESRSTLGVVVLAGELYALGGYDGQSYLQSVEKYIPKIRKWQPVAPMTTTRSCFAAAVLDGMIYAIGGYGPAHMNSVERYDPSKDSWEMVASMADKRIHFGVGVMLGFIFVVGGHNGVSHLSSIERYDPHQNQWTVCRPMKEPRTGVGAAVIDNYLYVVGGHSGSSYLNTVQKYDPISDTWLDSAGMIYCRCNFGLTAL 571

HSP 2 Score: 128.257 bits (321), Expect = 4.222e-33
Identity = 76/228 (33.33%), Postives = 113/228 (49.56%), Query Frame = 0 
Query:  111 SVSCFTNKSDKWFNISPMSQQRSSHVTITHGNKVYAIGGYDGQMSL--------KSAECYDPYTDTWTEIESMNYHRSSFAAVTMDQYIYVLGGHN----TCTVERYDTCNACWELMPAMSTKRLNFGAAQVCGFIYVVGGHDGREYLRSMERFDPVSSEWSVVCPMPSVRSGIGVTAAQHEIFVFGGHNGSRYLSSAYKYDVFQDKWTSIPDMTTARCDMAVISMDS 326
            SV  +  ++D W  ++P++  R          KVY IGG    +           S EC++P T+TWT +E MN  RS+   V +   +Y LGG++      +VE+Y      W+ +  M+T R  F AA + G IY +GG+ G  ++ S+ER+DP    W +V  M   R   GV      IFV GGHNG  +LSS  +YD  Q++WT    M   R  +    +D+
Sbjct:  300 SVEMYFPQNDSWIGLAPLNIPRYEFGICVLDQKVYVIGGIATNVRPGVTIRKHENSVECWNPDTNTWTSLERMNESRSTLGVVVLAGELYALGGYDGQSYLQSVEKYIPKIRKWQPVAPMTTTRSCFAAAVLDGMIYAIGGY-GPAHMNSVERYDPSKDSWEMVASMADKRIHFGVGVMLGFIFVVGGHNGVSHLSSIERYDPHQNQWTVCRPMKEPRTGVGAAVIDN 526
The following BLAST results are available for this feature:
BLAST of TCONS_00017377-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KLH282.570e-5734.12Kelch-like protein 28 OS=Homo sapiens GN=KLHL28 PE... [more]
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