TCONS_00017733-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00017733-protein
Unique NameTCONS_00017733-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length151

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00017733-protein ID=TCONS_00017733-protein|Name=TCONS_00017733-protein|organism=Clytia hemisphaerica|type=polypeptide|length=151bp
MAQVEDQAQFTDVQIAEFKEAFGLFDKNHDGSISVQELGEVMSRMGFDPT
EGELEDMLHDISGSGDIDFEKFVNMMAKIKNVDEEEETKLAFKMFDKDQN
GFIDKEELKLVMASLGEQLTDDEIQEMMAEADLDGDGTIDYNEFCQMMNS
K
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009932XLOC_009932Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00017733TCONS_00017733Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 17..45
e-value: 4.2E-7
score: 39.6
coord: 123..151
e-value: 3.1E-9
score: 46.7
coord: 87..115
e-value: 1.7E-6
score: 37.6
coord: 53..79
e-value: 21.0
score: 7.1
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 86..148
e-value: 2.4E-18
score: 66.2
IPR002048EF-hand domainPFAMPF00036EF-hand_1coord: 17..45
e-value: 3.0E-8
score: 32.6
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 119..151
score: 15.573
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 13..48
score: 15.294
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 83..118
score: 16.048
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 58..82
score: 6.452
IPR002048EF-hand domainCDDcd00051EFhcoord: 87..148
e-value: 4.72543E-20
score: 78.3585
IPR002048EF-hand domainCDDcd00051EFhcoord: 17..77
e-value: 3.30745E-12
score: 56.7873
NoneNo IPR availableGENE3D1.10.238.10coord: 67..102
e-value: 2.8E-15
score: 55.4
NoneNo IPR availableGENE3D1.10.238.10coord: 6..40
e-value: 4.7E-16
score: 58.0
NoneNo IPR availableGENE3D1.10.238.10coord: 103..151
e-value: 1.6E-22
score: 78.7
NoneNo IPR availableGENE3D1.10.238.10coord: 41..66
e-value: 4.3E-13
score: 48.5
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 96..108
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 132..144
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 26..38
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 3..148

Blast
[Close]
BLAST of TCONS_00017733-protein vs. Swiss-Prot (Human)
Match: CALM3 (Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.191e-53
Identity = 83/146 (56.85%), Postives = 112/146 (76.71%), Query Frame = 0 
Query:    9 QFTDVQIAEFKEAFGLFDKNHDGSISVQELGEVMSRMGFDPTEGELEDMLH--DISGSGDIDFEKFVNMMA-KIKNVDEEEETKLAFKMFDKDQNGFIDKEELKLVMASLGEQLTDDEIQEMMAEADLDGDGTIDYNEFCQMMNSK 151
            Q T+ QIAEFKEAF LFDK+ DG+I+ +ELG VM  +G +PTE EL+DM++  D  G+G IDF +F+ MMA K+K+ D EEE + AF++FDKD NG+I   EL+ VM +LGE+LTD+E+ EM+ EAD+DGDG ++Y EF QMM +K
Sbjct:    4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
The following BLAST results are available for this feature:
BLAST of TCONS_00017733-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CALM35.191e-5356.85Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1[more]
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