TCONS_00017905-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00017905-protein
Unique NameTCONS_00017905-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length348

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00017905-protein ID=TCONS_00017905-protein|Name=TCONS_00017905-protein|organism=Clytia hemisphaerica|type=polypeptide|length=348bp
MNSKYNMASIKKRKSEVNNAEPASKKPKQSWKDFKLSASDMAILHDPSNP
TADFWPTREKTITLEEAKLGTDVPVRVYADGIYDMFHAGHANSLRQAKSL
FPNTYLVVGSCSDQMTHKLKGFTVMTDEERYEMIRHCRYVDELITDAPWT
ITQEFLDKHKIDFVAHDDLPYNSAGQEDIYKFVKEAGQFAATERTPGIST
SDIITRIVRDYDMYVQRNLQRGYSRQDLNVGFIKEKEIVVKEKYKKIKDR
SQELITNWEDKSREAIMGFIEMFGPDSMMTGLWERGKNRLSVTSRRIREA
ISPPRSPMGGEGTSYDGHISSDDEDQSDIPNGSIETYNNLDGLSDTEK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010039XLOC_010039Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00017905TCONS_00017905Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004821Cyt_trans-like
IPR014729Rossmann-like_a/b/a_fold
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009058 biosynthetic process
molecular_function GO:0003824 catalytic activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 241..261
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 295..348
NoneNo IPR availableCDDcd02174CCTcoord: 74..222
e-value: 2.91968E-91
score: 271.363
NoneNo IPR availableSUPERFAMILY52374Nucleotidylyl transferasecoord: 76..207
IPR004821Cytidyltransferase-like domainTIGRFAMTIGR00125TIGR00125coord: 76..142
e-value: 2.9E-20
score: 70.2
IPR004821Cytidyltransferase-like domainPFAMPF01467CTP_transf_likecoord: 78..206
e-value: 9.7E-33
score: 113.3
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3D3.40.50.620coord: 49..214
e-value: 5.8E-41
score: 139.6

Blast
[Close]
BLAST of TCONS_00017905-protein vs. Swiss-Prot (Human)
Match: PCY1B (Choline-phosphate cytidylyltransferase B OS=Homo sapiens GN=PCYT1B PE=1 SV=1)

HSP 1 Score: 322.013 bits (824), Expect = 8.384e-109
Identity = 157/267 (58.80%), Postives = 198/267 (74.16%), Query Frame = 0 
Query:   62 ITLEEAKLGT--DVPVRVYADGIYDMFHAGHANSLRQAKSLFPNTYLVVGSCSDQMTHKLKGFTVMTDEERYEMIRHCRYVDELITDAPWTITQEFLDKHKIDFVAHDDLPYNSAGQEDIYKFVKEAGQFAATERTPGISTSDIITRIVRDYDMYVQRNLQRGYSRQDLNVGFIKEKEI-------VVKEKYKKIKDRSQE-----------LITNWEDKSREAIMGFIEMFGPDSMMTGLWERGKNRLSVTSRRIREAISPPRSPM 308
            +T+ +A+LGT  D PVRVYADGI+D+FH+GHA +L QAK+LFPN+YL+VG CSD +THK KGFTVM + ERYE +RHCRYVDE+I DAPWT+T EFL+KHKIDFVAHDD+PY+SAG +D+YK +KEAG F  T+RT GISTSDIITRIVRDYD+Y +RNLQRGY+ ++LNV FI EK          +KEK K +++RS+E           LI  WE+KSRE I  F+E+FGPD    G W   K      S R+ +A+SP +SP+
Sbjct:   62 LTIAQARLGTPADRPVRVYADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSDDLTHKFKGFTVMNEAERYEALRHCRYVDEVIRDAPWTLTPEFLEKHKIDFVAHDDIPYSSAGSDDVYKHIKEAGMFVPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKRYRFQNQVDKMKEKVKNVEERSKEFVNRVEEKSHDLIQKWEEKSREFIGNFLELFGPD----GAW---KQMFQERSSRMLQALSPKQSPV 321
The following BLAST results are available for this feature:
BLAST of TCONS_00017905-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PCY1B8.384e-10958.80Choline-phosphate cytidylyltransferase B OS=Homo s... [more]
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