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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00018052-protein ID=TCONS_00018052-protein|Name=TCONS_00018052-protein|organism=Clytia hemisphaerica|type=polypeptide|length=473bp
MNSGHTEDNTDKKKMLSVQRPSSATHCACCTNHDGGYTNASHSLTSPFSR
SPTSSGSAIRFIRQQSFDQPPHQKGPTKTKIFTPNINLRDLFLSEGTFSN
SSSQLISNNRKRKSTEENQQLSHSPKTTEPPPLFKSRLTDHLANGFNALE
SSNSLLKNTPTTKYYKYQQPTTTLSIVKPKHHNPGQLIRIQHFEESHKEK
IEKFPMTRSSPGPSGFNYELKQEPSQNLPYDIQSTNIKYERRSPNMQSPF
ERTNSPYRYPSPHNSQRASPNLQSSTTILTSPPPLVRTTPPPSMPPHTTP
YVGGASNVASVRYRSFKQPNSFDSTSASIDSSLSGSDEEENDSMVLMKPR
PTPSRVVERAKYERTKYERTIKLYKFLIDLLEDQHPCVMWIDRKIGIFKI
TDSEQLAQLWGEVKLNASMTYEKLARSFRHYYKKGILDSGETVISPVSKN
GKRKLYYKFSAVTLKRFLDIDPE Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003700 | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | sequence-specific DNA binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006355 |
regulation of transcription, DNA-templated |
| molecular_function |
GO:0043565 |
sequence-specific DNA binding |
| molecular_function |
GO:0003700 |
transcription factor activity, sequence-specific DNA binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR000418 | Ets domain | PRINTS | PR00454 | ETSDOMAIN | coord: 394..412
score: 41.6
coord: 371..384
score: 44.8
coord: 413..431
score: 45.22 |
| IPR000418 | Ets domain | SMART | SM00413 | etsneu2 | coord: 370..464
e-value: 2.7E-24
score: 96.7 |
| IPR000418 | Ets domain | PFAM | PF00178 | Ets | coord: 372..441
e-value: 5.3E-20
score: 71.6 |
| IPR000418 | Ets domain | PROSITE | PS50061 | ETS_DOMAIN_3 | coord: 371..437
score: 16.612 |
| IPR011991 | Winged helix-turn-helix DNA-binding domain | GENE3D | 1.10.10.10 | | coord: 355..468
e-value: 6.9E-23
score: 80.3 |
| IPR011991 | Winged helix-turn-helix DNA-binding domain | SUPERFAMILY | 46785 | "Winged helix" DNA-binding domain | coord: 360..460 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 205..303 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 99..133 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 320..349 |
Blast
The following BLAST results are available for this feature:
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