TCONS_00018130-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018130-protein
Unique NameTCONS_00018130-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length528

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018130-protein ID=TCONS_00018130-protein|Name=TCONS_00018130-protein|organism=Clytia hemisphaerica|type=polypeptide|length=528bp
MASEGSAAEQNQNLAAQLQTAITQLVDFRQQTQDTLNGFKEYQKSSIAKF
NNRLERKRKMDDVQFKNIGNEDQYNHEKRVMESMDDIEESLNENKLEDAK
KALKSERYWEHEETEQVSVAGKIREHAKFWEFELKAPSFILDIVKNGYSL
PFKKNPPPSYSKNNKSSLREHKFVKNSIEELVKNKCIREVDFIPYCVNPL
SVAERNSKLRLVLDLRNVNKYIDITKFKYDNIKTLSDLVNPGDLMFTFDL
KSGYHHVPINEDFHRYLGFSWEFKGITKYFVFVVLPFGLCSACWVFTKLM
RQLVKKWRGQGMKSVMYLDDGVACGYPESMIVKHRDIMAHDLKSAGLTIN
VKKSSLEPETEKEWLGFRINTEEMKIYVPLPKLEAVLRVIAEILTSDLVT
TRKIAKLAGRIIAMSIAIGPLTRLFTRKMYKFIDDRIMLGLAWDSNRLIS
KELKSELTFWKSNLSASNGVEFNTSPVITKVCYSDASEYAYGGFIVERLG
NIIAHGIFLYPNQIRVQLTESFLLLKTF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010180XLOC_010180Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018130TCONS_00018130Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 11..31
NoneNo IPR availableGENE3D3.10.10.10coord: 150..285
e-value: 4.6E-20
score: 71.3
NoneNo IPR availableGENE3D3.30.70.270coord: 286..377
e-value: 3.4E-14
score: 52.2
NoneNo IPR availableCDDcd03714RT_DIRS1coord: 248..369
e-value: 5.39235E-29
score: 109.741
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 150..503
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 242..369
e-value: 1.8E-12
score: 47.2
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 181..369
score: 11.909

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00018130-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top