TCONS_00018400-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018400-protein
Unique NameTCONS_00018400-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length136

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018400-protein ID=TCONS_00018400-protein|Name=TCONS_00018400-protein|organism=Clytia hemisphaerica|type=polypeptide|length=136bp
MSSIFSPTNISKKKQKLKQMEAEATKLRQNRIYTFDMLFKDWSANEQFLI
DYPDITTVLELAAIIPPSTAKVERSFSLMNLILTPQRKRLLPEYLSHCMR
ICKFRKLTDADFDEILKRWLVGEGTETAMRRVACRL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010317XLOC_010317Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018400TCONS_00018400Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008906HATC_C_dom
IPR012337RNaseH-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0046983 protein dimerization activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 10..30
NoneNo IPR availableGENE3D1.10.238.10coord: 8..119
e-value: 0.0012
score: 17.7
IPR008906HAT, C-terminal dimerisation domainPFAMPF05699Dimer_Tnp_hATcoord: 47..99
e-value: 9.3E-5
score: 22.0
IPR012337Ribonuclease H-like domainSUPERFAMILY53098Ribonuclease H-likecoord: 60..98

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00018400-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top