TCONS_00018492-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018492-protein
Unique NameTCONS_00018492-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length561

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018492-protein ID=TCONS_00018492-protein|Name=TCONS_00018492-protein|organism=Clytia hemisphaerica|type=polypeptide|length=561bp
MXRKFLNSWREELWKSCKVGIPDGDSETLNTLIFGGLVAWFLGKFRHECD
KEKLITAHFHEWMAGCGLVFCRTRHHDISTIFTTHATLLGRHLCAGSTDF
YNNLDKEAGDRKIYHRYCLERAATSIAHIFTTVSQITADEAEHLLGRKPD
IVTPNGLNIVKYTALHEFQNLHAKSKEKIHDFVRGHFYGNLDFDLDKTLY
FFTAGRYEFQNKGADVYLESLARLNYLLKASNSDVTVVAFLIFPAKTNNY
NVEALRGQAHVKQLRTTVNELHDIIGKRIFDSAMSGRLPDTEELLKQTDL
TALKRCLLATQNGRMAPVVTHNMIDDHLDPILNCVRKMQLFNLKTDRVKV
IFYPEFLSRTNPLFPMDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGVP
NVSTNLSGFGRFMAEHIDYPEFYGIYVIDRRFKNAKESIEQLSDHMNDFC
NLSRRQRIILRNRTERLSELLDWKNLGVYYKRARAMAIKQTHPEKAPRLS
LRTNQLNLRFPRPPSAPGSPALSRQVSDDEDEEDLEFRCAPDPEDAVVFR
ARSGSESSTTN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010368XLOC_010368Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018492TCONS_00018492Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008631Glycogen_synth
Vocabulary: Molecular Function
TermDefinition
GO:0004373glycogen (starch) synthase activity
Vocabulary: Biological Process
TermDefinition
GO:0005978glycogen biosynthetic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005978 glycogen biosynthetic process
molecular_function GO:0004373 glycogen (starch) synthase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.2000coord: 157..472
e-value: 7.9E-45
score: 152.6
NoneNo IPR availableSUPERFAMILY53756UDP-Glycosyltransferase/glycogen phosphorylasecoord: 367..475
NoneNo IPR availableSUPERFAMILY53756UDP-Glycosyltransferase/glycogen phosphorylasecoord: 38..226
IPR008631Glycogen synthasePFAMPF05693Glycogen_syncoord: 3..528
e-value: 1.6E-267
score: 889.1

Blast
[Close]
BLAST of TCONS_00018492-protein vs. Swiss-Prot (Human)
Match: GYS1 (Glycogen [starch] synthase, muscle OS=Homo sapiens GN=GYS1 PE=1 SV=2)

HSP 1 Score: 679.093 bits (1751), Expect = 0.000e+0
Identity = 329/550 (59.82%), Postives = 411/550 (74.73%), Query Frame = 0 
Query:    6 LNSWREELWKSCKVGIPDGDSETLNTLIFGGLVAWFLGKFRHECDKEKLITAHFHEWMAGCGLVFCRTRHHDISTIFTTHATLLGRHLCAGSTDFYNNL-----DKEAGDRKIYHRYCLERAATSIAHIFTTVSQITADEAEHLLGRKPDIVTPNGLNIVKYTALHEFQNLHAKSKEKIHDFVRGHFYGNLDFDLDKTLYFFTAGRYEFQNKGADVYLESLARLNYLLKASNSDVTVVAFLIFPAKTNNYNVEALRGQAHVKQLRTTVNELHDIIGKRIFDSAMSGRLPDTEELLKQTDLTALKRCLLATQNGRMAPVVTHNMIDDHLDPILNCVRKMQLFNLKTDRVKVIFYPEFLSRTNPLFPMDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPNVSTNLSGFGRFMAEHIDYPEFYGIYVIDRRFKNAKESIEQLSDHMNDFCNLSRRQRIILRNRTERLSELLDWKNLGVYYKRARAMAIKQTHPEKAPRLSLRTNQLN----LRFPRPPSAPGSPALSRQVSDDEDEEDLEFRCAPDPEDA 546
            L  W+ ELW +C +G+P  D E  + ++FG L  WFLG+F  + +++  + AHFHEW+AG GL  CR R   ++TIFTTHATLLGR+LCAG+ DFYNNL     DKEAG+R+IYHRYC+ERAA   AH+FTTVSQITA EA+HLL RKPDIVTPNGLN+ K++A+HEFQNLHA+SK +I +FVRGHFYG+LDF+LDKTLYFF AGRYEF NKGADV+LE+LARLNYLL+ + S+ TVVAF I PA+TNN+NVE L+GQA  KQL  T N + +  G+++++S + G LPD  ++L + D T +KR + ATQ     PV THNM+DD  DPIL  +R++ LFN   DRVKVIF+PEFLS T+PL P+DYEEFVRGCHLGVFPSYYEPWGYTPAECTVMG+P++STNLSGFG FM EHI  P  YGIY++DRRF++  +S  QL+  +  FC  SRRQRII RNRTERLS+LLDWK LG YY  AR MA+ +  PE     +   N+ +     R+PRP S P SP+LSR  S  + E++ + R  P  ED 
Sbjct:  126 LERWKGELWDTCNIGVPWYDREANDAVLFGFLTTWFLGEFLAQSEEKPHVVAHFHEWLAGVGLCLCRARRLPVATIFTTHATLLGRYLCAGAVDFYNNLENFNVDKEAGERQIYHRYCMERAAAHCAHVFTTVSQITAIEAQHLLKRKPDIVTPNGLNVKKFSAMHEFQNLHAQSKARIQEFVRGHFYGHLDFNLDKTLYFFIAGRYEFSNKGADVFLEALARLNYLLRVNGSEQTVVAFFIMPARTNNFNVETLKGQAVRKQLWDTANTVKEKFGRKLYESLLVGSLPDMNKMLDKEDFTMMKRAIFATQRQSFPPVCTHNMLDDSSDPILTTIRRIGLFNSSADRVKVIFHPEFLSSTSPLLPVDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSISTNLSGFGCFMEEHIADPSAYGIYILDRRFRSLDDSCSQLTSFLYSFCQQSRRQRIIQRNRTERLSDLLDWKYLGRYYMSARHMALSKAFPE---HFTYEPNEADAAQGYRYPRPASVPPSPSLSRHSSPHQSEDEEDPRNGPLEEDG 672
The following BLAST results are available for this feature:
BLAST of TCONS_00018492-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GYS10.000e+059.82Glycogen [starch] synthase, muscle OS=Homo sapiens... [more]
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