TCONS_00018568-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018568-protein
Unique NameTCONS_00018568-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length370

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018568-protein ID=TCONS_00018568-protein|Name=TCONS_00018568-protein|organism=Clytia hemisphaerica|type=polypeptide|length=370bp
METSSKMFSSLTPPQLLFCEEDDRYLDYDVDVLKNFRLFSSTFSVDELMK
EIPWSTEHPSTSAQPVYKKSVRQDCMWSRKVDTKESLEININNNCLPSSQ
TYNLVPPDLILSVRKKGLFQPCTYDLPSSSESFHSSDEEIRMQGDVNISP
NSTNLENDEEVNVVDLSPHSCVGLRAGQSFYSHDKSPLHTPYRTENEVNE
HSLPCTTPRMKEYLFDEPTRVNQKSCNQSSCNLSPDRMPYQIKEIAMKNC
TDKVSKIRYTAKKKKKEETPIDVKQSPQKRKSNPSMQHNMMERVRRINLR
EKYQNLRKELPSISGNVKVPKVKILKEAIMELKHLTYEESNLNHIKRSLI
DRYEDLQQKYSDLHQHSAAS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010379XLOC_010379Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018568TCONS_00018568Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046983 protein dimerization activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 346..366
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 261..287
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 289..341
e-value: 8.5E-7
score: 38.6
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 287..335
e-value: 6.7E-10
score: 38.7
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3D4.10.280.10coord: 271..337
e-value: 6.5E-12
score: 44.7
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 283..335
score: 13.173
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainCDDcd00083HLHcoord: 288..335
e-value: 4.48556E-9
score: 51.4459
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSUPERFAMILY47459HLH, helix-loop-helix DNA-binding domaincoord: 281..361

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00018568-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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