TCONS_00018856-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00018856-protein
Unique Name	TCONS_00018856-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	712

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00018856-protein ID=TCONS_00018856-protein|Name=TCONS_00018856-protein|organism=Clytia hemisphaerica|type=polypeptide|length=712bp
MEKTKLLKKVSTDEILEQIGEFGRFQWILDGIFCIMLLPATFQTLIMYFA
ALQPEWRCVANSTICNLNGTFSSENEFRCGIPRSEWEFTQPKDYSIVTEY
DIYCDTEWIVNLSTSILFLGWSVGSMILGWLADNYGRKTVLFPSLFITLL
IGAISPFVPNIFIFIGCRFVVGLFLPGTALQMFIIISELVGGKHRPKAGL
ILWIFLTVSFCLLGIKAYFIRQWKILFVVCTVPYVFIFAFYKFVPESVRW
LRLHGKYREALNTLERIAAWNGTSLDKNISLDDHLFQVHVTRPKPLFFFC
RGNLLQKSFIQGYAWLVSGMIFYGFSLSADQLGGSLYLNFILVSLVELPG
ICMALASCERFGRKRTVTIPMLIGGLVCGAIXTALQMFIIISELVGGKHR
PKAGLILWIFLTVSFCLLGIKAYFIRQWKILFVVCTVPYVFIFAFYKFVP
ESVRWLRLHGKYREALNTLERIAAWNGTSLDKNISLDDHLFQVHVTRPKP
LFFFCRGNLLQKSFIQGYAWLVSGMIFYGFSLSADQLGGSLYLNFILVSL
VELPGICMALASCERFGRKRTVTIPILIGGLVCGAISIFESGLVASNLGK
VVLALIGKMFITTSFNSIYTWSAELYPTELRAEGLGFCQVTSRIGAALAP
WVVKGFRVLHQSSPFLVMSALAIVSAVTLLFLPETKGEDLLEDVKDLKEM
DENGNFYKEIEI

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_010556	XLOC_010556	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00018856	TCONS_00018856	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005828	MFS_sugar_transport-like
IPR005829	Sugar_transporter_CS
IPR020846	MFS_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0022857	transmembrane transporter activity
GO:0005215	transporter activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0022857	transmembrane transporter activity
molecular_function	GO:0005215	transporter activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1250.20		coord: 487..709 e-value: 1.4E-21 score: 76.2
None	No IPR available	GENE3D	1.20.1250.20		coord: 25..261 e-value: 2.7E-22 score: 78.5 coord: 292..466 e-value: 5.8E-5 score: 21.9
IPR005828	Major facilitator, sugar transporter-like	PFAM	PF00083	Sugar_tr	coord: 99..413 e-value: 6.2E-21 score: 74.7
IPR005829	Sugar transporter, conserved site	PROSITE	PS00216	SUGAR_TRANSPORT_1	coord: 128..144
IPR020846	Major facilitator superfamily domain	PROSITE	PS50850	MFS	coord: 36..687 score: 14.227
IPR020846	Major facilitator superfamily domain	CDD	cd06174	MFS	coord: 103..245 e-value: 5.21438E-13 score: 68.4945
IPR020846	Major facilitator superfamily domain	CDD	cd06174	MFS	coord: 308..683 e-value: 7.59184E-9 score: 55.7829
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 360..690
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 106..383

Blast

[Close]

BLAST of TCONS_00018856-protein vs. Swiss-Prot (Human)
Match: S22A3 (Solute carrier family 22 member 3 OS=Homo sapiens GN=SLC22A3 PE=1 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 1.074e-46
Identity = 119/421 (28.27%), Postives = 195/421 (46.32%), Query Frame = 0

Query:   11 STDEILEQIGEFGRFQWILDGIFCIMLLPATFQTLIMYFAALQP-----------------------EWRCVANST----------------ICNLNGTFSSENEFRCGIP--------------RSEWEFTQPKDYSIVTEYDIYCDTEWIVNLSTSILFLGWSVGSMILGWLADNYGRKTVLFPSLFITLLIGAISPFVPNIFIFIGCRFVVGLFLPGTALQMFIIISELVGGKHRPKAGLILWIFLTVSFCLLGIKAYFIRQWKILFVVCTVPYVFIFAFYKFVPESVRWLRLHGKYREALNTLERIAAWNGTSLDKNISLDDHLFQVHVTRPKPLFFFCRGNLLQKSFIQGYAWLVSGMIFYGFSLSADQLGGSLYLNFILVSLVELPGICMALASCERFGRKRTVTIPMLIGGLVC 378
            S DE L+++GEFGRFQ  +  + C+  +   F  + + F   QP                       EW   A ++                +   N + S+ +   C  P              R  W + Q    +IV+E+D+ C   W+++L+ +IL LG+  G+  LG+ AD YGR  +   S     + G +  F PN  +F+  RF+ G+F  GT +  ++I++E+VG K R   G+++ +F T+   +L   AYFI  W+ + +  T+P      +Y  VPES RWL    K  +AL  L RIA  NG  L  N S +  +    V+ P  L       + + + I  +AW  S +++ G  +    +GG+LY++F +  +VELPG  + L + ER GR+       ++ G+ C
Sbjct:    3 SFDEALQRVGEFGRFQRRVFLLLCLTGVTFAFLFVGVVFLGTQPDHYWCRGPSAAALAERCGWSPEEEWNRTAPASRGPEPPERRGRCQRYLLEAANDSASATSALSCADPLAAFPNRSAPLVPCRGGWRYAQAHS-TIVSEFDLVCVNAWMLDLTQAILNLGFLTGAFTLGYAADRYGRIVIYLLSCLGVGVTGVVVAFAPNFPVFVIFRFLQGVFGKGTWMTCYVIVTEIVGSKQRRIVGIVIQMFFTLGIIILPGIAYFIPNWQGIQLAITLPSFLFLLYYWVVPESPRWLITRKKGDKALQILRRIAKCNGKYLSSNYS-EITVTDEEVSNPSFLDLVRTPQMRKCTLILMFAWFTSAVVYQGLVMRLGIIGGNLYIDFFISGVVELPGALLILLTIERLGRRLPFAASNIVAGVAC 421

HSP 2 Score: 157.532 bits (397), Expect = 6.068e-41
Identity = 95/318 (29.87%), Postives = 162/318 (50.94%), Query Frame = 0

Query:  383 TALQMFIIISELVGGKHRPKAGLILWIFLTVSFCLLGIKAYFIRQWKILFVVCTVPYVFIFAFYKFVPESVRWLRLHGKYREALNTLERIAAWNGTSLDKNISLDDHLFQVHVTRPKPLFFFCRGNLLQKSFIQGYAWLVSGMIFYGFSLSADQLGGSLYLNFILVSLVELPGICMALASCERFGRKRTVTIPILIGGLVCGAISIFESGLVASNLGKVVLALIGKMFITTSFNSIYTWSAELYPTELRAEGLGFCQVTSRIGAALAPWVVKGFRVLHQSSPFLVMSALAIVSAVTLLFLPETKGEDLLEDVKDLKEM 700
            T +  ++I++E+VG K R   G+++ +F T+   +L   AYFI  W+ + +  T+P      +Y  VPES RWL    K  +AL  L RIA  NG  L  N S +  +    V+ P  L       + + + I  +AW  S +++ G  +    +GG+LY++F +  +VELPG  + L + ER GR+       ++ G+ C   +    G+      +  +A +G++ IT +F  +Y  ++ELYPT LR  G+  C      G  +AP+++     +    P ++   LA +    ++ LPETKG  L E V D++++
Sbjct:  222 TWMTCYVIVTEIVGSKQRRIVGIVIQMFFTLGIIILPGIAYFIPNWQGIQLAITLPSFLFLLYYWVVPESPRWLITRKKGDKALQILRRIAKCNGKYLSSNYS-EITVTDEEVSNPSFLDLVRTPQMRKCTLILMFAWFTSAVVYQGLVMRLGIIGGNLYIDFFISGVVELPGALLILLTIERLGRRLPFAASNIVAGVACLVTAFLPEGIAWL---RTTVATLGRLGITMAFEIVYLVNSELYPTTLRNFGVSLCSGLCDFGGIIAPFLLFRLAAVWLELPLIIFGILASICGGLVMLLPETKGIALPETVDDVEKL 535

The following BLAST results are available for this feature:

BLAST of TCONS_00018856-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00018856-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
S22A3	1.074e-46	28.27	Solute carrier family 22 member 3 OS=Homo sapiens ...	[more]

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TCONS_00018856-protein (polypeptide) - C. hemisphaerica