TCONS_00019110-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00019110-protein
Unique NameTCONS_00019110-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2682

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00019110-protein ID=TCONS_00019110-protein|Name=TCONS_00019110-protein|organism=Clytia hemisphaerica|type=polypeptide|length=2682bp
MNAKSSITQLTHDIDRYLSLIKTSLGSKQNSKSVNSLKTLWDNYCLKLKR
SLYTEKVLWMGDYLFSQKCYKLSGYYCYGHFLQTLFNFTFDDIASMNGER
FMSLFVTGNTDLINTLRCLMGYAASIIYHHISLDESLQNQKTISIVVNFL
KVLQLSMQVALMEDAHCWLVYNGTIHIHCISKLLMTKGFASSVLEFLIWS
CVSMECSVPLMTVKYLGWRTQLYATTSLCFYDLKADQAAEEFAKRGMKKV
LELQEIEKISTSPVTPETKFVFKQSRIKMDALIFKRHIFESRRRPKGVLR
PKIKPLLKDIAGNNWPRTGTERMLADIFTGRAAQFLAITETLSNSNRRIG
QTSPGCSETDETATDVFMELFFAGTEIVSGGGGTRTHISAKHEKSVQNVT
KDMTLIDLATAESQTISLKSVLQFIKYAYNYEQWDTFDTLLPPVLDELKK
HPDDELCIAEIKVLKIFAGMTSINSSRLRKKFVMLKTEDLGEMSLSRNYK
AAHIEELLNTALSLKDVLEQKNLKFYVERYHDFFVDVILLLWNKCKTYFA
KVTSDSCDAHKSLYHSFFFTKWLQIFLITHDALMKFNMADADPNIVAEST
LKLSHVLLCIAKMRELKIDRPVSPVESFERSNQELDTVKSPINIPTPKTE
ESKRGSFSEELFEDVTSFLYIPNHTSKLLAYVLDLLTQCLEQLDNARDKM
THLETKIADDSFEDKQAENGEETINISMLKLKSFQMELLYLHHQVSLQLP
QQTLVPSNVKGTIPEKRSKEKSSKIQNSTTVQAIPTDAGKNSLSKALYRM
ALLKVAKCSMSVQETSKVIQEAFDLLEKARASEERIKREGESVSTTSLSG
TKTSIPPPPQVVRRGHTTITYRPAPFEPSNGDVIASYCLFVRNAAGHNVK
VRVSDTNFPGTGEKVPFGKDLTLTVTKLVPNERYMAAIAAYNAEGDLIGS
SIGMSGRPVLASNHLPLLLAYGYLARIAYLKDGYKVTKQCINILWNYFVQ
EQPEPKKYFQTVANDFKLKPKRLRLKNIEYSSEVVHRYFVESIFIGIEID
IKEGKLFYDSVSNGSSTRDNQIERLEKCERLLIALEMSGWLNDNQICLQS
IVQIYGLLSPIIYWKFPIQPVLEVLCHVFGGLQEIQSSFKNRKQNATNDS
LHHMVSCLTYHIATILVDYNRKSVALHVLDTGGKILGQLNPPDSATPQPT
EKGEAFMKKLQKRTYKKQKTKGGANKISTDPTNGGVTCEQRAIDIFTSKL
LKEGASEGELELTGAEDGVLLNAVVAALPPLTAYKEVLKFKRRAHFLESF
VSVIGKALKDRMFDSALDWTKEAVTWLTRRNEIILNKSMTEAGRGILVVT
AQTAEGERNNRKLSSLTGLQNHIPPEAEGEISPNNSLFLMADGMADNQRF
GRIDERTSNRQLAEIIASQSLDERVSSRKISITKGMSGSKIIGTKKIQVM
TAEERIIKDAILRMQAVLPELWKTQQRKKKLRIVSQEELPWRSQMCLISA
ECHFNICLDKFYLMSRRLGYPNLKFDERMMDFSWFTLSTTGVLMVSWVGC
FKDQVQLHDKPVDRGGKTLEHEKNSKQTAEIYLMPSSSRQSVAVKVEKKL
TPRPPRVLDQQEALKIKQDDARKLFILNLEQSYNYYQRAMVLAHRGQNWV
LLQHICNKLIQSTTTMMMTITLLNNNIDLTKHETPYTVIQLRPLIYNVFY
MAAEFLLDFLNNLKLEQDSNISLNNDFPSSLQQSSELPDHHDVENISHVD
YGNIKRVVMFAVEVLYYQEKWERLSSLIVKFNAITSDRFCTSLLPILVYA
QQALHNRVQASTKPVPRITFDPNTGFPVQIEMERVTPDPIEIGAHIDPEG
SDLYNVPDDGLQYSIAPFNFDVSLERFRNAFDQKLYTVKQLEHARLLLVS
YLAAKQGDAQNMGKVTSEESKVSFAASQIKPPSYDPEDLHLKTFQNREDL
EFYPLIESEQVASIVMSYERAVEMLTKTKQFDLAIQAMHELGNVMYHSNN
IRSAYKWWCQALDNILQTTDALNNWKQFVNIEDRTILSTKRLLDICGAKG
CLLGGLITTSIAKYIHPTNIDVSTEICHLAASFFQALFCTSLVHPSAFHS
YITYDISTEETVKQVIPGLHFFSDMHHLHCGNLTSHLIWLTTRLIRNGFY
LRCQPLLTLSHYMASTICKDINTTIEVKLLRIKSLSALERFEEAFHHFYH
VVSGKMLPSPADFIRAKVNTKHFVFKNTKLITDQLNVHCLHQVCGININQ
SPYTNIYGRELCNKISIAQSGLLASVAELLNEIPIEASPSVSKESSTSSS
TPNSNSKEKMMNKERGSPPSKKSDRKMQAKKSKENIQLIDVKQHSLNNLK
WKLLNSAENAVRDILKLIVVPKNGEAKMRSEELEAYIGSQLKLSQIESAR
YHVLASANHIHECLSGINYHTTVDSNQEISNTYEYQVKPNESFDKGDTSI
DCLTWLKCRRMLSSRLSDEDNAVGRLAGPMLSLVGRVGSFEEYVQNALVE
CKIFNDTSSACLLKMLQIQSDLKCGKDTYDIIERLKELQEVLSSYWILPS
SLVTLEIEVKVLLTDICVLLNPSNLPMAVECYEDIESYFLNQLVLQGYNC
HTSKKMPVPSQINFHSLLLSDFTSIKMRLYRAKSLGMVHAPQPVHARVWK
EMIKDVDSINVLIDRLTNKDFAVKTELTLLKG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010716XLOC_010716Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00019110TCONS_00019110Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR011990TPR-like_helical_dom
IPR027912DUF4486
IPR003961FN3_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 686..706
NoneNo IPR availableCOILSCoilCoilcoord: 819..839
NoneNo IPR availableCOILSCoilCoilcoord: 504..524
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 836..863
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 2290..2334
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 837..952
e-value: 4.0E-6
score: 26.3
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 1869..2585
e-value: 0.001
score: 17.9
IPR027912Protein of unknown function DUF4486PFAMPF14858DUF4486coord: 29..561
e-value: 1.7E-138
score: 462.4
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 854..945

Blast
BLAST of TCONS_00019110-protein vs. Swiss-Prot (Human)
Match: CFA54 (Cilia- and flagella-associated protein 54 OS=Homo sapiens GN=CFAP54 PE=2 SV=3)

HSP 1 Score: 634.795 bits (1636), Expect = 0.000e+0
Identity = 565/1955 (28.90%), Postives = 912/1955 (46.65%), Query Frame = 0
Query:   32 KSVNSLKTLWDNYCLKLKRSLYTEKVLWMGDYLFSQKCYKLSGYYCYGHFLQTLFNFTFD----DIASMNGERFMSLFVTGNTDLINTLRCLMGYAASIIYHHISLDESLQNQKTISIVVNFLKVLQLSMQVALMEDAHCWLVYNGTIHIHCISKLLMTKGFASSVLEFLIWSCVSMECSVPLMTVKYLGWRTQLYATTSLCFYDLKADQAAEEFAKRGMKKVLELQEIEKISTSPVTPETKFVFKQSRIKMDALIFKRHIFESRRRPKGVLRPKIKPLLKDIAGNNWPRTGTERMLADIFTGRAAQFLAITETLSNSNRRIGQTSPGCSETDETAT-DVFMELFFAGTEIVSGGGGTRTHISAKHEKSVQNVTKDMTLIDLATAESQTISLKSVLQFIKYAYNYEQWDTFDTLLPPVLDELKKHPDDELCIAEIKVLKIFAGMTSINSSRLRKKFVMLKTEDLGEMSLSRNY--KAAHIEELLNTALSLKDVLEQKNLKFY--------VERYHDFFVDVILLLWNKCKTYFAKVTSDSCDAHKSLYHSFFFTKWLQIFLITHDALMKFNMADADPNIVAESTLKLSHVLLCIAKMRELKIDRPVSPVESFERSNQELDTVKSPINIPTPKTEESKRGSFSEELFEDVTSFLYI--PNHTSKLL-AY-VLDL------LTQCLEQLDNARDKMTHLETK----IADDSFEDKQAENGEETINISMLKLKSFQMELLYLHHQVS------LQLPQQTLVPSNVKGTIPEKRSKEKSSKIQNSTTVQAIPTDAGKNSLSKALYRM--ALLKVAKCSMSVQETSKVIQEAFDLLEKARASEERIKREGESVSTTSLSGTKTSIPPPPQVVRRGHTTITYRPAPFEPSNGDVIASYCLFVRNAAGHNVKVRVSDTNFPGTGEKVPFGKDLTLTVTKLVPNERYMAAIAAYNAEGDLIGSSIGMSGRPVLASNHLPLLLAYGYLARIAYLKDGYKVTKQCINILWNYFVQEQPEPKKYFQTVANDFKLKPKRLRLKNIEYSSEVVHRYFVESIFIGIEIDIKEGKLFYDSVSNGSSTRDNQIERLEKCERLLIALEMSGWLNDNQICLQSIVQIYGLLSPIIYWKFPIQPVLEVLCHVFGGLQEIQSSFKNRKQNATNDSLHHMVSCLTYHIATILVDYNRKSVALHVLDTGGKIL----GQLNPPDSATPQPTEKGEAFMKKLQKRTYKKQKTKGGANKISTDPTNGGVTCEQRAIDIFTSKLLKEGASEGELELTGAEDGVLLNAVVAALPPLTAYKEVLKFKRRAHFLESFVSVIGKALKDRMFDSALDWTKEAVTWLTRRNEIILNKSMTEAGRGILVVTAQTAEGERNNRKLSSLTGLQNHIPPEAEGEISPNNSLFLMADGMADNQRFGRIDERTSNRQLAEIIASQSLDERVSSRKISITKGMSGSKIIGTKKIQVMTAEER-----IIKDAILRMQAVLPELWKTQQRKKKLRIVSQEELPWRSQMCLISAECHFNICLDKFYLMSR-RLGYPNLKFDERMMDFSWFTLSTTGVLMVSWVGCFKDQVQLHDKPVDRGGKTLEHEKNSKQTAEIYLMPSSSRQSVAVKVEKKLTPRPPRVLDQQEALKIKQDD--ARKLFILNLEQSYNYYQRAMVLAHRGQNWVLLQHICNKLIQSTTTMMMTITLLNNNIDLTKHETPYTVIQLRPLIYNV--FYMAAEFLLDFLNNLKLEQDSNISLNND-----FPSSL------QQSSELPDHHDVENISHVDYGNIKRVVMFAVEVLYYQEKWERLSSLIVKFNAITSDRFCTSLLPILVYAQQALHNRVQASTKPVPRITFDPNTGFPVQIEMERVTPDPIEIGAHIDPEGSDLYNVPD--DGL------QYSIA------PFNFDVSLERFRNAFDQKLYTVKQLEHARLLLVSYLAAKQGDAQ 1910
            +   SL  +W  Y  +L    Y EK+L +GD L   K YKL+   CYG +LQ  FN  FD    D+       F   F      L  T   L G            DE+L+N++++   ++ L  L+L MQVAL ++  CW+++NGTI+I+ I + LM  G +S  LE+L+W+ + ME  VPL++++YL WR  LY     C YD  A    E FA+R + K+ EL+++E +S+S    E++  F+++ +KM  +IFKR +FESRR+ K V RPKI+  L+++   +WPRT TER+L ++F   A+QFLA+ E LS+SNRRI QT P    TDE    DV  ELF AG E++       ++I A     + +  K  +L++L       IS+ + ++FIK A+ YE+W  F++    ++  L++  D E   AE  +  + A    IN    R K ++   E+  E   ++ Y  K A  +  L T    +D+       +         V+   +  VD I+ LW KCK    ++     D  K         KW+ +    ++ +  + M D D  +VAE TL+LS +L  +            SP   F+   Q LD    P+   T K   + +G         +T  L I   N   +LL AY +LD       L   L  L N    + H   K    I  D+++   +       N  M+ L    +EL+   H+++      LQ+ Q   V  ++    PEK  +  S+   +  T   I     KN+LSKA+Y M  ALL   K + S   + +++ EA+ L+++  A +  +    + + ++     K+ +PPPP ++ R H ++T +PAPF  ++   ++ YC+    A G   KVR+++ + P +GE +P        V  L  NE+Y+ A+AAY+  G L+G +IG + +P+L    L  + A  +L ++AY    Y++ K+  + +W+YFV    + ++    ++N   +  +RL    +  +S ++   F+ +IF+  +I IKE  LF D++         QI RL +CER+L+ALE+S +LND+   LQ++ Q YGLL+PIIY    + PV+++L      LQ + S   ++K  A+ +S+ HM++C  ++I  IL  +    +A+ +++ G K+L    G  +  D +  Q     E   KK  K    +Q       KI+          EQ A  +  + LLK        EL+G ED + L  VV       A KEV+KFK++  FLE F  V+ K + +  F   ++ T     +L RRNE +L            ++  +  +   N +                      N SL   A  M                   EI  S  + +R+ S+K    +      I     I  M A ER     + K A   +   L  L  +  ++K+   +S EE+PWR+QM L  A  HFN+ L K +  ++ + G  ++    R  D + F+L  +G ++ +     K  V+ +   +D      + + N    AE +    S+  +  +  E     +     D Q     K+ D  A    + +  + + Y +RAMVLAHRG  W LLQ+ C  L   T  + +   LL   +DL K    + + Q   L  +V  FY+ AE L+D L  ++L+  S+I    D      PS           S L   H +++++ VD   I   V+ ++EVLY  EKWE L SL ++FN ++ +R+   + P+LVYAQ+ L  R+Q      P IT  P   +  +   E++T     IG  +    S +    +  D L      +YS A      P +   +L  FR   ++  Y  + + H+R LL  +LA  Q   Q
Sbjct:  105 RCATSLFNIWTKYAPRLPADYYNEKLLKVGDSLCQMKEYKLALLQCYGRYLQQ-FNTNFDENKVDVTQFKATFFPKGFKDKTAGL--TFHALSGKNMCNYQLVCDSDENLKNKESVVQCLHILSSLRLIMQVALPQEHLCWIIFNGTIYIYTICRKLMVIGQSSKALEYLLWASMCMESLVPLLSLRYLTWRATLYTAVCQCCYDCHAGIHGEAFARRALAKIDELRQLELMSSSKSQEESRRYFREATMKMAVMIFKRGVFESRRKNKAVFRPKIRINLREVQTLSWPRTVTERLLDEMFDSTASQFLAVLEALSDSNRRILQTGPIV--TDEVEIHDVVSELFMAGKELL-----IMSNIGA---DGMLDFPK-TSLLELMIGRKDVISVDAAVKFIKLAFTYEEWSLFESSAVHLIYFLQRQDDPESKKAEKDLTLLIAMEPLINVK--RNKGLIFPLENYKEGQSTQIYLKKIAVHDTCLKTCGYSEDIFHLAATLYVCVCTAPQDVQPDKEIVVDTIMFLWQKCKLGIQRLNISRNDYAK-FTQKISTNKWIYLLWQINEVIHCYKMEDIDIVVVAEVTLRLSEILESLG-----------SPGRKFK---QSLDV---PLREGTNKFPGAPKG---------ITEILPILQKNPVEQLLFAYKLLDRAIGGINLNCMLTSLPNGSSVIDHCYAKRTHHIDGDTYKPLAS-------NSFMMDL---HLELIQAQHRIAVVLLDKLQVLQTPTVSKDISTKGPEKLKQSGST---DCFTELNIMNKIKKNTLSKAIYLMQKALLIFEKDATST-SSWELLMEAYSLIQRIEAEQNALYSYQKYLESS--KRKKSRVPPPPILLSRTHCSVTLKPAPF--TSEVKVSWYCILGCKAEGSYGKVRLNNNHLPNSGEAIPADGKSVFEVKGLETNEKYVFAVAAYSNNGKLVGGAIGETTKPILVYPPLSTITARMFLTQVAYQVGNYELAKKVFSPVWDYFVASPLQDEQSVICLSNIITITQRRLHSDILAETSSILLYLFLRNIFVTSDIKIKEENLFCDNIKGNEIFPSQQIARLIECERVLVALELSNFLNDSSYALQAVTQCYGLLAPIIYHNIVLVPVVQILIKCIVVLQGLPSIVCSKKHTASFESIQHMIACCIFYITKILRSWREYDLAVMIINYGKKMLDITPGCKSLFDGSNEQEEMPEEDSSKKSLKTKKPQQILL--PEKIN----------EQLA--LLETHLLKLTKQYVTSELSGGEDPIFLYPVVLNWSVKGAVKEVMKFKQKPRFLEFFTQVMLKCMNEEKFHLMVEVTTPVHDFLKRRNESLLG-----------LIKVKYKDSALNKKA---------------------NKSLKFKAAVM-------------------EIGRSAEMQQRIRSKKKETLRDF----IFKNPAISEMVAHERNRRTSVRKAAQRYLMDYLNPLILSYVKRKRFHRLSLEEMPWRAQMNLYLAGAHFNLVLQKLWECTKMKFGTSHMMVSFRSCDPNMFSLYNSGTVLPTR----KLTVENYKAMLDFLLTAKKRKANLPSDAEEF----STFINSIMSDENMSKTQTVYDSDSQSGSSAKEKDRGANLCVMDHFMKIFLYCRRAMVLAHRGGYWTLLQNCCRALWNFTQELQI---LLKQAVDLDK---TFPISQDGFLCTSVLPFYLGAELLIDML--IQLQNTSSIKPIEDKGEFSVPSCYGNIKNDNGGSSLTFEHPLDDVNVVDLKWIHDFVLKSLEVLYQVEKWETLVSLAIQFNTVSHERYTEQVTPLLVYAQRQLLLRIQKFKG--PDITQQPCARYEAEYG-EKITCRNF-IGKQLKINSSTIEATSNCTDLLKMLISSEYSRAKALVCVPVDVTDTLRCFRETLEKSKYHNRSIRHSRKLLSLFLAQTQDVLQ 1909          

HSP 2 Score: 169.474 bits (428), Expect = 1.536e-41
Identity = 143/530 (26.98%), Postives = 251/530 (47.36%), Query Frame = 0
Query: 1973 EMLTKTKQFDLAIQAMHELGNVMYHSNNIRSAYKWWCQALDNILQTTDALNNWKQF----VNIEDRTILS-----TKRLLDICGAKGCLLGGLITTSIAKYIHPTNIDVSTEICHLAASFFQALFCTSLVHPSAFHSYITYDISTEETVKQVIPGLHFFSDMHHLHCGNLTSHLIWLTTRL--IRNGFYLRCQPLLTLSHYMASTICKDINTTIEVKLLRIKSLSALERFEEAFHHFYHVVSGKMLPS--PADFIRAKVNTKHF-VFKNTKLITDQLNVHCLHQVCGININQSPYTNIYGRELCNKISIAQSGLLASVAELLNEIPIEASPSVSKESSTSSSTPNSNSKEKMMNKERGSPPSKKSDRKMQAKKSKENIQLIDVKQHSLNNLKWKLLNSAENAVRDILKLIVVPKNGEAKMRSEELEAYIGSQLKLSQIESARYHVLASANHIHECLSGINYHTTVDSNQEISNTYEYQVKPNESF--DKGDTS-IDCLT-----------WLKCRRMLSSRLSDEDNAVG 2474
            ++L  + Q  L +QA+H LG+++  +   R+A+K WCQALD+I +  D L+ WK+F     N+ +          ++  L   G  GCL G +I+  IA++I   N++  T+ C L+A  FQ L  T+L HP A   Y  Y+I+      Q++PG+  FSD +     ++ + L ++   L  +R    +   PLL L  Y  S IC+DI   +E ++L+I+ L  L  F EAF+    +  GK +P   PA + +A    K F  F + KL+T + N+  + ++    +  +    I    L NK +  ++    SVA  +N +P     +V     T+ S PN  + E++ +K+ GS             K K+ I        +L+ LK  LL  AE+ +  +L    V +   ++  + ELE  + ++L+L+ +   R+    SA  +   L+ +   + +   + + +  E  V P  S   +K D+  +D ++           WL+CR  L +    + + +G
Sbjct: 1906 DVLQASNQRSLKVQALHSLGSLLIFAEKKRAAFKCWCQALDDIFRKPDVLHTWKEFGPSLTNVTNSHSPPGFKDYSEEFLSRVGIWGCLQGAVISAKIAQFIKSLNVEKKTDCCILSALLFQGLLRTTLPHPKAERCYAQYEIT------QLLPGIELFSDRYRADICSVIASLYYIIRELHFVRQNLIVL--PLLALYQYFVSGICQDITRNLEARILKIEVLIDLRFFSEAFYEISQIFYGKNMPCPIPAGY-KATGKMKIFQSFDSGKLLTSKENIQAIDELRNKGL-PAVLVTIGQPHLLNKFNFVKAYFFLSVAATINCVPENKFKTV----ITNKSKPNLPNLEEIYSKDDGS-------SFYNLTKLKDEI--------TLSMLKSMLLMEAEDRLNFLLS--EVEQKTLSQCSAGELEIVVEARLQLAAVALQRHRAAYSAAIVFSTLTLLQ-DSKLFEKKVVQDDTENPVSPGTSVTENKDDSEFLDPISLNAREYFNIHLWLRCRLALVTAFVAQIHGIG 2403          
The following BLAST results are available for this feature:
BLAST of TCONS_00019110-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CFA541.536e-4128.90Cilia- and flagella-associated protein 54 OS=Homo ... [more]
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