TCONS_00019169-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00019169-protein
Unique NameTCONS_00019169-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length394

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00019169-protein ID=TCONS_00019169-protein|Name=TCONS_00019169-protein|organism=Clytia hemisphaerica|type=polypeptide|length=394bp
MDDKGNKVVVCDNGTGFVKCGYAGSNFPEHIFPSMVGRPMLRSSAKVGDI
EIKDLMVGDEASQLRSMLECSYPMDNGIVRNWDDMLHVWDYTFGETKMNI
NPNNCKVLLTEPPLNPMRNREKMIEVMFEKYGFEGVYIAIQAVLTLYAQG
LLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAGRDITKYLIKLLLLR
GYAFNHTADFETVRMMKEKLCYVGYDIEQEQKLALETTFLVEQYTLPDGR
TVRMSGERFEAPEALFQPHLVNIEGVGVAELLFNTIQAADIDTRPEFYKH
IVLSGGSTMYPGLPSRLEREIKQLYLERVLKGDTSKLAKFKIRIEDPPRR
KHMVFLGGAVLADIMKNKDDFWMSRAEYQEKGVRVLEKLGMAPK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010757XLOC_010757Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00019169TCONS_00019169Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004000Actin
IPR020902Actin/actin-like_CS
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004000Actin familyPRINTSPR00190ACTINcoord: 27..36
score: 49.28
coord: 144..163
score: 68.83
coord: 52..63
score: 56.84
coord: 64..86
score: 50.58
coord: 119..132
score: 56.37
coord: 240..256
score: 33.95
IPR004000Actin familySMARTSM00268actin_3coord: 6..390
e-value: 5.0E-195
score: 663.9
IPR004000Actin familyPFAMPF00022Actincoord: 6..388
e-value: 8.7E-114
score: 380.2
NoneNo IPR availableGENE3D3.30.420.40coord: 4..388
e-value: 1.6E-110
score: 369.6
NoneNo IPR availableCDDcd00012NBD_sugar-kinase_HSP70_actincoord: 9..185
e-value: 1.10581E-18
score: 81.4811
NoneNo IPR availableSUPERFAMILY53067Actin-like ATPase domaincoord: 5..157
NoneNo IPR availableSUPERFAMILY53067Actin-like ATPase domaincoord: 150..387
IPR020902Actin/actin-like conserved sitePROSITEPS01132ACTINS_ACT_LIKEcoord: 108..120

Blast
[Close]
BLAST of TCONS_00019169-protein vs. Swiss-Prot (Human)
Match: ARP2 (Actin-related protein 2 OS=Homo sapiens GN=ACTR2 PE=1 SV=1)

HSP 1 Score: 721.079 bits (1860), Expect = 0.000e+0
Identity = 334/392 (85.20%), Postives = 370/392 (94.39%), Query Frame = 0 
Query:    1 MDDKGNKVVVCDNGTGFVKCGYAGSNFPEHIFPSMVGRPMLRSSAKVGDIEIKDLMVGDEASQLRSMLECSYPMDNGIVRNWDDMLHVWDYTFGETKMNINPNNCKVLLTEPPLNPMRNREKMIEVMFEKYGFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAGRDITKYLIKLLLLRGYAFNHTADFETVRMMKEKLCYVGYDIEQEQKLALETTFLVEQYTLPDGRTVRMSGERFEAPEALFQPHLVNIEGVGVAELLFNTIQAADIDTRPEFYKHIVLSGGSTMYPGLPSRLEREIKQLYLERVLKGDTSKLAKFKIRIEDPPRRKHMVFLGGAVLADIMKNKDDFWMSRAEYQEKGVRVLEKLGMA 392
            MD +G KVVVCDNGTGFVKCGYAGSNFPEHIFP++VGRP++RS+ KVG+IEIKDLMVGDEAS+LRSMLE +YPM+NGIVRNWDDM H+WDYTFG  K+NI+  NCK+LLTEPP+NP +NREK++EVMFE Y F GVY+AIQAVLTLYAQGLLTGVV+DSGDGVTHICPVYEGF+LPHLTRRLDIAGRDIT+YLIKLLLLRGYAFNH+ADFETVRM+KEKLCYVGY+IEQEQKLALETT LVE YTLPDGR +++ GERFEAPEALFQPHL+N+EGVGVAELLFNTIQAADIDTR EFYKHIVLSGGSTMYPGLPSRLERE+KQLYLERVLKGD  KL+KFKIRIEDPPRRKHMVFLGGAVLADIMK+KD+FWM+R EYQEKGVRVLEKLG+ 
Sbjct:    1 MDSQGRKVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIEIKDLMVGDEASELRSMLEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVLVESYTLPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADIMKDKDNFWMTRQEYQEKGVRVLEKLGVT 392
The following BLAST results are available for this feature:
BLAST of TCONS_00019169-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ARP20.000e+085.20Actin-related protein 2 OS=Homo sapiens GN=ACTR2 P... [more]
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