TCONS_00019242-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00019242-protein
Unique NameTCONS_00019242-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length307

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00019242-protein ID=TCONS_00019242-protein|Name=TCONS_00019242-protein|organism=Clytia hemisphaerica|type=polypeptide|length=307bp
MFREKISILSFQFWILLFLPLVECSPGDRDPHFQLCSRKCIVNCINQQHS
FLSWGCKGECEYDCMFRITDERTKLGLDILQYYGKWPFYRLFIIQEPASF
IFSVLNLVSQIIGWIHYSKNVDSSFKFYGLAKVQSFINSVAWTCAIIFHT
RDTYWTEKMDYFSAAAVIGVSLFTCFSHIIGDMESFATKFIGALILSVFS
FHIYYMAFIHFDYGYNMKFLVSNGIINITVWFIWSWINRKKRPVGKCVLV
MGGTLLLASLEVFDFPPIFWILDGHALWHFGTIPIPFLWFSFLTENALFE
TSKSSLD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010798XLOC_010798Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00019242TCONS_00019242Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007217Per1-like
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007217Per1-likePFAMPF04080Per1coord: 49..296
e-value: 7.8E-81
score: 271.5

Blast
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BLAST of TCONS_00019242-protein vs. Swiss-Prot (Human)
Match: PGAP3 (Post-GPI attachment to proteins factor 3 OS=Homo sapiens GN=PGAP3 PE=1 SV=2)

HSP 1 Score: 191.045 bits (484), Expect = 8.313e-59
Identity = 106/298 (35.57%), Postives = 163/298 (54.70%), Query Frame = 0 
Query:   25 SPGDRDPHFQLCSRKCIVNCINQQ----------------HSFLSWGCKGECEYDCMFRITDERTKLGLDILQYYGKWPFYRLFIIQEPASFIFSVLNLVSQIIGWIHYSKNVDSSFKFYGLAKVQSFINSVAWTCAIIFHTRDTYWTEKMDYFSAAAVIGVSLFTCFSHIIGDMESFATKFIGALILSVFSFHIYYMAFIHFDYGYNMKFLVSNGIINITVWFIWSWINRKKRP-VGKCVLVMGGTLLLASLEVFDFPPIFWILDGHALWHFGTIPIPFLWFSFLTENALFETSKSS 305
            S GDR+P +    R C++ C  Q                  S   W C+ +C+Y+CM+       + G  + Q++GKWPF R    QEPAS + S LN ++ ++    Y   V +S   Y      ++++  AW  + +FHTRDT  TEKMDYF A+ VI  S++ C    +G           AL+L + + H+ Y++ I FDYGYN+   V+ G++N+  W  W   N+++ P V KCV+V+     L+ LE+ DFPP+FW+LD HA+WH  TIP+  L+FSFL +++L+   +S 
Sbjct:   21 SQGDREPVY----RDCVLQCEEQNCSGGALNHFRSRQPIYMSLAGWTCRDDCKYECMWVTVGLYLQEGHKVPQFHGKWPFSRFLFFQEPASAVASFLNGLASLVMLCRYRTFVPASSPMYHTCVAFAWVSLNAWFWSTVFHTRDTDLTEKMDYFCASTVILHSIYLCCVRTVGLQHPAVVSAFRALLLLMLTVHVSYLSLIRFDYGYNLVANVAIGLVNVVWWLAWCLWNQRRLPHVRKCVVVVLLLQGLSLLELLDFPPLFWVLDAHAIWHISTIPVHVLFFSFLEDDSLYLLKESE 314
The following BLAST results are available for this feature:
BLAST of TCONS_00019242-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PGAP38.313e-5935.57Post-GPI attachment to proteins factor 3 OS=Homo s... [more]
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