TCONS_00019388-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00019388-protein
Unique NameTCONS_00019388-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length480

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00019388-protein ID=TCONS_00019388-protein|Name=TCONS_00019388-protein|organism=Clytia hemisphaerica|type=polypeptide|length=480bp
MAEANTSNHDDISSENQQKLTELQQIVGKDVEECKSLLLKHSWNMEAAVH
SVFSEQEGIASVWDNISESAQQRQQQSPSLRPPQSSSSTSTRISRPYHVG
RTVQMNNARQSWATWLLNAPYNILHFGLSFAYYSASQFVLFIVRIVWPTF
GRTPTDPVEDVTKFKENFEEEYGSTHPTFYLGSYGQVLADAKKELRFLLV
YLHAPHHQSTPEFCRNVLSNENFREYTINRRLLFWGCDISTNEGHRVSRA
MRETTYPFLAVVCLREGRMTVVWRIEGCLDLDRLIAVCEQVFNDNEAALV
AAQAERNERNFSRSLREEQDQDFLKSLEEDKKKSALKKEKEDAIKEVERV
KKEKEDERLRKLEELANRRQVCRTKFESLVEPSQGDEGVVKLRIRLSNGE
NMQRFFMKSDTLQLLYDYVLSNDASPSEFQLRTSFPRNVYPLDETNCERT
LESIGIKTSTQFLVEDLTEESSGDEEEDDE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010896XLOC_010896Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00019388TCONS_00019388Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006577UAS
IPR001012UBX_dom
IPR012336Thioredoxin-like_fold
IPR029071Ubiquitin-rel_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 333..365
NoneNo IPR availableCOILSCoilCoilcoord: 301..321
NoneNo IPR availablePFAMPF14555UBA_4coord: 17..57
e-value: 4.4E-6
score: 26.3
NoneNo IPR availableGENE3D1.10.8.10coord: 1..94
e-value: 5.8E-10
score: 38.8
NoneNo IPR availableGENE3D3.10.20.90coord: 386..468
e-value: 4.6E-19
score: 68.0
NoneNo IPR availableGENE3D3.40.30.10coord: 181..297
e-value: 3.0E-4
score: 20.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..98
IPR006577UASSMARTSM0059445neu3coord: 163..289
e-value: 1.5E-34
score: 130.8
IPR001012UBX domainSMARTSM00166ubx_3coord: 382..466
e-value: 8.8E-4
score: 27.1
IPR001012UBX domainPFAMPF00789UBXcoord: 386..465
e-value: 9.3E-12
score: 44.9
IPR001012UBX domainPROSITEPS50033UBXcoord: 385..464
score: 17.994
IPR012336Thioredoxin-like foldSUPERFAMILY52833Thioredoxin-likecoord: 155..301
IPR029071Ubiquitin-related domainSUPERFAMILY54236Ubiquitin-likecoord: 352..468

Blast
[Close]
BLAST of TCONS_00019388-protein vs. Swiss-Prot (Human)
Match: FAF2 (FAS-associated factor 2 OS=Homo sapiens GN=FAF2 PE=1 SV=2)

HSP 1 Score: 267.314 bits (682), Expect = 1.671e-84
Identity = 170/471 (36.09%), Postives = 258/471 (54.78%), Query Frame = 0 
Query:   11 DISSENQQKLTELQQIVG-KDVEECKSLLLKHSWNMEAAVHSVFSEQEGIASVWDNISESAQQRQQQSPSLRPPQSSSST----STRISRPYHVGRTVQMNNARQSWATWLLNAPYNILHFGLSFAYYSASQFVLFIVRIVWPTFGRTPTDPVEDVTKFKENFEEEYGSTHPTFYLGSYGQVLADAKKELRFLLVYLHAPHHQSTPEFCRNVLSNENFREYTINRRLLFWGCDISTNEGHRVSRAMRETTYPFLAVVCLREGRMTVVWRIEGCLDLDRLIAVCEQVFNDNEAALVAAQAERNERNFSRSLREEQDQDFLKSLEEDK-KKSALKKEKEDAIKEVERVKKEK--EDERLRKLEELANRRQVCRTKFESLVEPSQGDEGVVKLRIRLSNGENMQRFFMKSDTLQLLYDYVLSNDASPSEFQLRTSFPRNVYPL---DETNCERTLESIGIKTSTQFLVEDLTEE 470
            D++ E  +KL + Q + G + +++C+  L +H+WN+EAAV    +EQEG+ SV++             P  RP Q +++     S  +SRP   G           W  +L+  P+        F YY+      F +R + P      TDPV D+  F  +FEE+YG  HP FY G+Y Q L DAK+ELRFLLVYLH   HQ + EFCRN L         IN R+LFW C  +  EG+RVS+A+RE TYPFLA++ L++ RMTVV R+EG +  D LI     + + N+  LV+ + ER ERN ++ LR++QD+ +L SL  D+ K+   ++E+E   ++ E V+++K  E+ R + L+E   R+  C          S  D   VK+  +L N   ++R F  S +L +++D++ S   SP +FQ+  +FPR V P    +E     TL+  G+  +    V+DLT+E
Sbjct:    8 DLTQEQTEKLLQFQDLTGIESMDQCRHTLEQHNWNIEAAVQDRLNEQEGVPSVFN------------PPPSRPLQVNTADHRIYSYVVSRPQPRGLL--------GWGYYLIMLPFR-------FTYYTILDIFRFALRFIRPDPRSRVTDPVGDIVSFMHSFEEKYGRAHPVFYQGTYSQALNDAKRELRFLLVYLHGDDHQDSDEFCRNTLCAPEVIS-LINTRMLFWACSTNKPEGYRVSQALRENTYPFLAMIMLKDRRMTVVGRLEGLIQPDDLINQLTFIMDANQTYLVSERLEREERNQTQVLRQQQDEAYLASLRADQEKERKKREERERKRRKEEEVQQQKLAEERRRQNLQEEKERKLECLPPEP-----SPDDPESVKIIFKLPNDSRVERRFHFSQSLTVIHDFLFSLKESPEKFQIEANFPRRVLPCIPSEEWPNPPTLQEAGLSHTEVLFVQDLTDE 445
The following BLAST results are available for this feature:
BLAST of TCONS_00019388-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FAF21.671e-8436.09FAS-associated factor 2 OS=Homo sapiens GN=FAF2 PE... [more]
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